| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875860
Identifier: 160875860
GI number: 160875860
Start: 3268539
End: 3269135
Strand: Reverse
Name: 160875860
Synonym: Sbal195_2749
Alternate gene names: NA
Gene position: 3269135-3268539 (Counterclockwise)
Preceding gene: 160875861
Following gene: 160875857
Centisome position: 61.14
GC content: 48.41
Gene sequence:
>597_bases ATGCCGTTACCTTTGCTTTGGATGGGCAGTGCCGTAATTGGCGCGGTTTTGTTGGCCGATGAGCGCGAGAAGCGTCAGCA ACTTGAGCGCGACAGAGTACTTGGTAAGGCTCCTAAGTATCCCGTTGCCAATCGCGCTATGGTGGCGGCGCCGAGTCAAT GGCAAAAGGGATTTAAACAAGTTGCGCCAATCCCTGGCAGTATCGTCTGTTGTTATGTTTTTGGCGTAATTGAACATACG GGTATCTGGCTGGGTGACGACTGCTTAGTGGAGTTACACGGTTCAGGGTTGGTGCGGGCCGTGTCGGTCAAGCGTTTCTT GGCGGGGCGAACGGGCAGCCAAATCTATCTTGCCTGTAATCACTTACATCAACCGCTCATCGCCGATGCTGTGTTAACCC GCGCCGAGCAGGCGATTTATCAATATCGTGAGTACGATTTATTTGACAATAACTGCCATCGATTTGTCTGGTCTTGTATT AGTCAAAAGGGCGAAGAGGTGGTTAAAGGTTTTAATGAGTTAAATCAAAAACTCGCCGAGCATTTTAATCAAGGTATTTA TTGGGATGAGATGATCATGAGCAAGCTGAATGAATAA
Upstream 100 bases:
>100_bases ATCCTAAGCTTAACTTTAAAGCTTAAATTCAATGCTGCCAACTTGGCAAGCCAACCAACTTGTACTTCACTCTAATAAAC TGAGTGTGTAGGAGAATATG
Downstream 100 bases:
>100_bases GATCTGTCGTCATAAACTAAAAAAGCCATCGATTAAGATGGCTTTTTGTTTTAGTAAAACACGATATTATCGTTTTGCAG AAACCGTTTACGGCTTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPLPLLWMGSAVIGAVLLADEREKRQQLERDRVLGKAPKYPVANRAMVAAPSQWQKGFKQVAPIPGSIVCCYVFGVIEHT GIWLGDDCLVELHGSGLVRAVSVKRFLAGRTGSQIYLACNHLHQPLIADAVLTRAEQAIYQYREYDLFDNNCHRFVWSCI SQKGEEVVKGFNELNQKLAEHFNQGIYWDEMIMSKLNE
Sequences:
>Translated_198_residues MPLPLLWMGSAVIGAVLLADEREKRQQLERDRVLGKAPKYPVANRAMVAAPSQWQKGFKQVAPIPGSIVCCYVFGVIEHT GIWLGDDCLVELHGSGLVRAVSVKRFLAGRTGSQIYLACNHLHQPLIADAVLTRAEQAIYQYREYDLFDNNCHRFVWSCI SQKGEEVVKGFNELNQKLAEHFNQGIYWDEMIMSKLNE >Mature_197_residues PLPLLWMGSAVIGAVLLADEREKRQQLERDRVLGKAPKYPVANRAMVAAPSQWQKGFKQVAPIPGSIVCCYVFGVIEHTG IWLGDDCLVELHGSGLVRAVSVKRFLAGRTGSQIYLACNHLHQPLIADAVLTRAEQAIYQYREYDLFDNNCHRFVWSCIS QKGEEVVKGFNELNQKLAEHFNQGIYWDEMIMSKLNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22390; Mature: 22259
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPLLWMGSAVIGAVLLADEREKRQQLERDRVLGKAPKYPVANRAMVAAPSQWQKGFKQ CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHH VAPIPGSIVCCYVFGVIEHTGIWLGDDCLVELHGSGLVRAVSVKRFLAGRTGSQIYLACN HCCCCCHHHHHHHHHHHHHCCCEECCHHEEEECCCCHHHHHHHHHHHHCCCCCEEEEEHH HLHQPLIADAVLTRAEQAIYQYREYDLFDNNCHRFVWSCISQKGEEVVKGFNELNQKLAE HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFNQGIYWDEMIMSKLNE HHHCCCCHHHHHHHHHCC >Mature Secondary Structure PLPLLWMGSAVIGAVLLADEREKRQQLERDRVLGKAPKYPVANRAMVAAPSQWQKGFKQ CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHH VAPIPGSIVCCYVFGVIEHTGIWLGDDCLVELHGSGLVRAVSVKRFLAGRTGSQIYLACN HCCCCCHHHHHHHHHHHHHCCCEECCHHEEEECCCCHHHHHHHHHHHHCCCCCEEEEEHH HLHQPLIADAVLTRAEQAIYQYREYDLFDNNCHRFVWSCISQKGEEVVKGFNELNQKLAE HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFNQGIYWDEMIMSKLNE HHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA