| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is gmhB [H]
Identifier: 160875857
GI number: 160875857
Start: 3265604
End: 3266152
Strand: Reverse
Name: gmhB [H]
Synonym: Sbal195_2746
Alternate gene names: 160875857
Gene position: 3266152-3265604 (Counterclockwise)
Preceding gene: 160875860
Following gene: 160875854
Centisome position: 61.08
GC content: 46.45
Gene sequence:
>549_bases GTGAGTCGAGCAGTATTTTTAGACCGTGATGGCGTGATTAACAAAGATCATGGTTATGTCCACTTAGTGGATGACTTCGA ATATATCGAAGGTGTGTTTGAATCTTGCCTCTCTTTGAAGGACATGGGCTACAAGTTAGTTGTCGTCACTAATCAATCTG GTATTGCCCGTGGTATGTATACAGAAGATCAATTCCACAGCTTAACTGAGTGGATGGATTGGAACTTTGCCGACAAAGGC GTTGAACTCGATGGTATCTACTATTGCCCGCACCATGCTGAAAATGGCATAGGGGAATATAAGGTCGACTGTGATTGCCG CAAACCTAAGCCGGGTATGCTCAATGATGCGGCGCAATTCCTGAAAATAGACTTAGCTCTCTCAGTCATGGTTGGCGACA AAGCCGAAGATATGCAGGCAGCGAAAGCGGCGGGCGTAACCACACGTATATTAGTGCGCACTGGTAAGGTTATTGCTGAT GACAGTGATGCCACAGTGGTACTTGGCAGTATTGCCGATGTGCCGGCTTACTTAAAAAGCCTAGGCTAG
Upstream 100 bases:
>100_bases ACGCTCAATTTAGCGTTAAAAGCACAACTTCGCGGTGCAATTTCTGATAATGAATGGAATAATAGCGCGATAACGCCTTA GGCGATTTTGGAGTATTACA
Downstream 100 bases:
>100_bases TTGCTGCACTACTACTTATAAGCAGATAAACATTTGCTGATAAGTTCATCTCAAGCAGCAACTATCACAGTAACCAGTAG CGCGAGTTGCCGCTCTTGTT
Product: D,D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSRAVFLDRDGVINKDHGYVHLVDDFEYIEGVFESCLSLKDMGYKLVVVTNQSGIARGMYTEDQFHSLTEWMDWNFADKG VELDGIYYCPHHAENGIGEYKVDCDCRKPKPGMLNDAAQFLKIDLALSVMVGDKAEDMQAAKAAGVTTRILVRTGKVIAD DSDATVVLGSIADVPAYLKSLG
Sequences:
>Translated_182_residues MSRAVFLDRDGVINKDHGYVHLVDDFEYIEGVFESCLSLKDMGYKLVVVTNQSGIARGMYTEDQFHSLTEWMDWNFADKG VELDGIYYCPHHAENGIGEYKVDCDCRKPKPGMLNDAAQFLKIDLALSVMVGDKAEDMQAAKAAGVTTRILVRTGKVIAD DSDATVVLGSIADVPAYLKSLG >Mature_181_residues SRAVFLDRDGVINKDHGYVHLVDDFEYIEGVFESCLSLKDMGYKLVVVTNQSGIARGMYTEDQFHSLTEWMDWNFADKGV ELDGIYYCPHHAENGIGEYKVDCDCRKPKPGMLNDAAQFLKIDLALSVMVGDKAEDMQAAKAAGVTTRILVRTGKVIADD SDATVVLGSIADVPAYLKSLG
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=178, Percent_Identity=61.2359550561798, Blast_Score=231, Evalue=2e-62, Organism=Escherichia coli, GI87082027, Length=149, Percent_Identity=32.2147651006711, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 3.1.1.-
Molecular weight: Translated: 20048; Mature: 19917
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAVFLDRDGVINKDHGYVHLVDDFEYIEGVFESCLSLKDMGYKLVVVTNQSGIARGMY CCCEEEEECCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCC TEDQFHSLTEWMDWNFADKGVELDGIYYCPHHAENGIGEYKVDCDCRKPKPGMLNDAAQF CCHHHHHHHHHHCCCCCCCCEEECEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH LKIDLALSVMVGDKAEDMQAAKAAGVTTRILVRTGKVIADDSDATVVLGSIADVPAYLKS HHHEEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCEEECCCCCEEEEECHHHHHHHHHH LG CC >Mature Secondary Structure SRAVFLDRDGVINKDHGYVHLVDDFEYIEGVFESCLSLKDMGYKLVVVTNQSGIARGMY CCEEEEECCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCC TEDQFHSLTEWMDWNFADKGVELDGIYYCPHHAENGIGEYKVDCDCRKPKPGMLNDAAQF CCHHHHHHHHHHCCCCCCCCEEECEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH LKIDLALSVMVGDKAEDMQAAKAAGVTTRILVRTGKVIADDSDATVVLGSIADVPAYLKS HHHEEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCEEECCCCCEEEEECHHHHHHHHHH LG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301; 12101286 [H]