| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pepV [H]
Identifier: 160875849
GI number: 160875849
Start: 3246482
End: 3248125
Strand: Reverse
Name: pepV [H]
Synonym: Sbal195_2738
Alternate gene names: 160875849
Gene position: 3248125-3246482 (Counterclockwise)
Preceding gene: 160875854
Following gene: 160875848
Centisome position: 60.74
GC content: 49.21
Gene sequence:
>1644_bases ATGTCTCAATCTGGTATTCAACATGCTCGCGTGCGTCGAGCGTTATCCTTGGCATTACTGACTGCGTCCAGCTGGGTTAT GCCGCAATGTATTGCAGCGCCAGCAACAACAGCGGCTCACACAAACGTCCCCCAGTTAAGCCAAAATGCACTAAAGGTCG CCGATTACGCGGTCGCAAAATACGATGCGGCTATGGTGCAGAGTTTGACTCAGTTGGTGAGTTTTAATACCCAAGCGGTT GAAGGGCAAACGCCAGATACCAATCCCGCCTTTGTGGGCTTCAAGTCGAGTTTAAAGCAACTCAGTCAGGATCTCGGGTT AGATTATGCCGATCATGGTTATGTTGTGTTGATTGGCTTAGATGCCAATTCGGCTGTAAACAATGAATCTAAAAAGTTAG GCATAGTCACCCACGGCGATGTGCAACCAGCTAATCCTGCATTGTGGGCGCAGAGCCCTTATCTGCTTGATACTCAATCG GAACCGGGCAAACTGATTGGTCGCGGCACAGAGGACGACAAGGGCGCCATCGTTACCGCCATGTATGCGATGAAGGCGAT TAAAGATAAACACATTAAGCGAGATAGACGCATTGAACTCTTGGTTTATCTTGCTGAAGAGTCCGACTGGGAACCACTGA AAACCTTTTTAGCCAGCTACACGCCAGCGGACATGAACATTACTATCGATGCCGAATACCCCGTGGTTACCGCCGAGAAA GGTTGGAGTAAGATTACCTTTACTGTGCCCAATATTACGATCTCCAATATAGAAGCTAAAGCAGAGGCTTCAACTCAAGC GCCCACGTTAACGGCTTTCTCTGGTGGCTATTTTGCCAGCCAAGTACCGCAGCAGGCTGAAGCAGAAATTGAGGCGGTTT CACCCGCATTACTGACAAAGTTACAGACCAGAGCCGCCGCGCAGCAGGGGATGAAATATCGTTTTGAAAACCATTGCGTC GATAAACAGTGCAACTTGCATATCTTTGCCGACGGTAAAGCCGCCCATTCATCCACTCCTGAAGATGGAGTGAATGCTGT GACCCATTTGGCGGCATTGTTAAGTCCCGAATTGAATGATAAACCTTGGCCGAAAACTAGCGCATCCTTAACTGTCGCCG CCATGAACGAGCTGGTGGGGTTAGGCATTTATGCCGAGCAATTTGGTGACTTAGCCTATAAAGATGATTTTATGGGACCG CTGACCTTAGCCCCAACTGTGGTGGTGCAAACTCAGAAGGGCACTGAGGTGACCATTAACTTGCGTCGTCCCGTCGGCAA AACACCAGAGTTACTCACTAAGCAAGCCCGTGAAGCCCTAGCACTGTGGCAGGAGAAACATCAAGTGCAACTTGCTGATA TCGAAAGTTATTGGGGCGAGCCTATGGTGATGAAAGGTGCGCCGCAGCAACAAACCCTGCTCGACGTGTTTGCCCACTTC ACTGGCATAGTCGACCCTAAACCCGTTGCAATCGGCGGCTCAACCAACAGTAAATTATTCCCCAATGCCTTAAGTTTTGG CCCTGCCATGCCGGGCGTGGAATACACTGGCCATACTGAAAAAGAGTTCATCACCCATAAGCAATTTATGCTGAATCTAA AAATGTACACCGCAGCGTTTATCGAGCTATCGGCGGTTAAATAG
Upstream 100 bases:
>100_bases ACTGGCGTAAGCCACACCTTGCACTAAACCAGCTTAATCCATTTTCAACCGTCTCTTGCAGTACGGTCCTAAAACACGAA TAACAATAATAGGATCTTCT
Downstream 100 bases:
>100_bases CGCTCTTTGTGAAAGTGATTTTGGGATGGCACAAAAGTGTTGGGTAGAAATAAAGTCTGTATCAAGTATTAAGCTAAGCA TTAAGGGTTAATAGAACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Ala-His dipeptidase; Peptidase V [H]
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MSQSGIQHARVRRALSLALLTASSWVMPQCIAAPATTAAHTNVPQLSQNALKVADYAVAKYDAAMVQSLTQLVSFNTQAV EGQTPDTNPAFVGFKSSLKQLSQDLGLDYADHGYVVLIGLDANSAVNNESKKLGIVTHGDVQPANPALWAQSPYLLDTQS EPGKLIGRGTEDDKGAIVTAMYAMKAIKDKHIKRDRRIELLVYLAEESDWEPLKTFLASYTPADMNITIDAEYPVVTAEK GWSKITFTVPNITISNIEAKAEASTQAPTLTAFSGGYFASQVPQQAEAEIEAVSPALLTKLQTRAAAQQGMKYRFENHCV DKQCNLHIFADGKAAHSSTPEDGVNAVTHLAALLSPELNDKPWPKTSASLTVAAMNELVGLGIYAEQFGDLAYKDDFMGP LTLAPTVVVQTQKGTEVTINLRRPVGKTPELLTKQAREALALWQEKHQVQLADIESYWGEPMVMKGAPQQQTLLDVFAHF TGIVDPKPVAIGGSTNSKLFPNALSFGPAMPGVEYTGHTEKEFITHKQFMLNLKMYTAAFIELSAVK
Sequences:
>Translated_547_residues MSQSGIQHARVRRALSLALLTASSWVMPQCIAAPATTAAHTNVPQLSQNALKVADYAVAKYDAAMVQSLTQLVSFNTQAV EGQTPDTNPAFVGFKSSLKQLSQDLGLDYADHGYVVLIGLDANSAVNNESKKLGIVTHGDVQPANPALWAQSPYLLDTQS EPGKLIGRGTEDDKGAIVTAMYAMKAIKDKHIKRDRRIELLVYLAEESDWEPLKTFLASYTPADMNITIDAEYPVVTAEK GWSKITFTVPNITISNIEAKAEASTQAPTLTAFSGGYFASQVPQQAEAEIEAVSPALLTKLQTRAAAQQGMKYRFENHCV DKQCNLHIFADGKAAHSSTPEDGVNAVTHLAALLSPELNDKPWPKTSASLTVAAMNELVGLGIYAEQFGDLAYKDDFMGP LTLAPTVVVQTQKGTEVTINLRRPVGKTPELLTKQAREALALWQEKHQVQLADIESYWGEPMVMKGAPQQQTLLDVFAHF TGIVDPKPVAIGGSTNSKLFPNALSFGPAMPGVEYTGHTEKEFITHKQFMLNLKMYTAAFIELSAVK >Mature_546_residues SQSGIQHARVRRALSLALLTASSWVMPQCIAAPATTAAHTNVPQLSQNALKVADYAVAKYDAAMVQSLTQLVSFNTQAVE GQTPDTNPAFVGFKSSLKQLSQDLGLDYADHGYVVLIGLDANSAVNNESKKLGIVTHGDVQPANPALWAQSPYLLDTQSE PGKLIGRGTEDDKGAIVTAMYAMKAIKDKHIKRDRRIELLVYLAEESDWEPLKTFLASYTPADMNITIDAEYPVVTAEKG WSKITFTVPNITISNIEAKAEASTQAPTLTAFSGGYFASQVPQQAEAEIEAVSPALLTKLQTRAAAQQGMKYRFENHCVD KQCNLHIFADGKAAHSSTPEDGVNAVTHLAALLSPELNDKPWPKTSASLTVAAMNELVGLGIYAEQFGDLAYKDDFMGPL TLAPTVVVQTQKGTEVTINLRRPVGKTPELLTKQAREALALWQEKHQVQLADIESYWGEPMVMKGAPQQQTLLDVFAHFT GIVDPKPVAIGGSTNSKLFPNALSFGPAMPGVEYTGHTEKEFITHKQFMLNLKMYTAAFIELSAVK
Specific function: Is a relatively unspecific dipeptidase cleaving a variety of dipeptides, notably those with an N-terminal beta-Ala or D-Ala residue, e.g. carnosine (beta-Ala-His). To a lesser extent, also shows aminopeptidase activity, since it is able to catalyze the re
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001261 - InterPro: IPR011291 - InterPro: IPR010964 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF01546 Peptidase_M20 [H]
EC number: 3.4.13.3
Molecular weight: Translated: 59347; Mature: 59216
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSGIQHARVRRALSLALLTASSWVMPQCIAAPATTAAHTNVPQLSQNALKVADYAVAK CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH YDAAMVQSLTQLVSFNTQAVEGQTPDTNPAFVGFKSSLKQLSQDLGLDYADHGYVVLIGL HHHHHHHHHHHHHHCCCCEECCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCEEEEEEE DANSAVNNESKKLGIVTHGDVQPANPALWAQSPYLLDTQSEPGKLIGRGTEDDKGAIVTA CCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCEEEECCCCCCCEEECCCCCCCCHHHHH MYAMKAIKDKHIKRDRRIELLVYLAEESDWEPLKTFLASYTPADMNITIDAEYPVVTAEK HHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCEEECCC GWSKITFTVPNITISNIEAKAEASTQAPTLTAFSGGYFASQVPQQAEAEIEAVSPALLTK CCCEEEEEECCEEEECCEECCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHCCHHHHHH LQTRAAAQQGMKYRFENHCVDKQCNLHIFADGKAAHSSTPEDGVNAVTHLAALLSPELND HHHHHHHHHCCCEEHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCC KPWPKTSASLTVAAMNELVGLGIYAEQFGDLAYKDDFMGPLTLAPTVVVQTQKGTEVTIN CCCCCCCCCEEHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCEEEEE LRRPVGKTPELLTKQAREALALWQEKHQVQLADIESYWGEPMVMKGAPQQQTLLDVFAHF ECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCCEEECCCCCHHHHHHHHHHH TGIVDPKPVAIGGSTNSKLFPNALSFGPAMPGVEYTGHTEKEFITHKQFMLNLKMYTAAF HCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEE IELSAVK EEEEECC >Mature Secondary Structure SQSGIQHARVRRALSLALLTASSWVMPQCIAAPATTAAHTNVPQLSQNALKVADYAVAK CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH YDAAMVQSLTQLVSFNTQAVEGQTPDTNPAFVGFKSSLKQLSQDLGLDYADHGYVVLIGL HHHHHHHHHHHHHHCCCCEECCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCEEEEEEE DANSAVNNESKKLGIVTHGDVQPANPALWAQSPYLLDTQSEPGKLIGRGTEDDKGAIVTA CCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCEEEECCCCCCCEEECCCCCCCCHHHHH MYAMKAIKDKHIKRDRRIELLVYLAEESDWEPLKTFLASYTPADMNITIDAEYPVVTAEK HHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCEEECCC GWSKITFTVPNITISNIEAKAEASTQAPTLTAFSGGYFASQVPQQAEAEIEAVSPALLTK CCCEEEEEECCEEEECCEECCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHCCHHHHHH LQTRAAAQQGMKYRFENHCVDKQCNLHIFADGKAAHSSTPEDGVNAVTHLAALLSPELND HHHHHHHHHCCCEEHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCC KPWPKTSASLTVAAMNELVGLGIYAEQFGDLAYKDDFMGPLTLAPTVVVQTQKGTEVTIN CCCCCCCCCEEHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCEEEEE LRRPVGKTPELLTKQAREALALWQEKHQVQLADIESYWGEPMVMKGAPQQQTLLDVFAHF ECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCCEEECCCCCHHHHHHHHHHH TGIVDPKPVAIGGSTNSKLFPNALSFGPAMPGVEYTGHTEKEFITHKQFMLNLKMYTAAF HCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEE IELSAVK EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7528082 [H]