Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is yqfB [C]

Identifier: 160875749

GI number: 160875749

Start: 3128108

End: 3128425

Strand: Reverse

Name: yqfB [C]

Synonym: Sbal195_2637

Alternate gene names: 160875749

Gene position: 3128425-3128108 (Counterclockwise)

Preceding gene: 160875751

Following gene: 160875744

Centisome position: 58.5

GC content: 44.65

Gene sequence:

>318_bases
GTGTTACTCAATAAAATCACTTTTTTCGAGCGCTTTGAACACGATATCTTAAGTGGCGCGAAAACCATTACCCTGCGCGA
TGAAGCCGAATCCCATGTGATAGTAGGGCAAATTCTGCCTGTGTCCACCTTCGAAACTGAACGCTGGTTTTGTGATATCC
AGATTATCGATGTCACGCCAGTAAAGTTAACTGAGCTCACCGAGGTGCATGCTAAACAAGAGAATATGACTCTGCCACAG
CTACGCGATGTGATTGCAGAGATTTACCCCGGTCTTGAGCAATTGTTTATGATCCGCTTTAGGATTTTGTCGCAGTAA

Upstream 100 bases:

>100_bases
TCAGTTGGCGTTAAAAGCCATTATATTGCCCAGCATTATTAGTTCGATAAACTGACGTTAATGTCATTTTTATTGCTCAT
GTACAATCCGAGGATAAGCT

Downstream 100 bases:

>100_bases
TCTGTCACAGTAAAATGTGCAGTGAGAAATTCTCGCTAAATGCGTAAATAAAAAAGGCTGCATTGCAGCCTTTTTGTTCA
TTGTTTCAATATCATGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTPVKLTELTEVHAKQENMTLPQ
LRDVIAEIYPGLEQLFMIRFRILSQ

Sequences:

>Translated_105_residues
MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTPVKLTELTEVHAKQENMTLPQ
LRDVIAEIYPGLEQLFMIRFRILSQ
>Mature_105_residues
MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTPVKLTELTEVHAKQENMTLPQ
LRDVIAEIYPGLEQLFMIRFRILSQ

Specific function: Unknown

COG id: COG3097

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0267 family [H]

Homologues:

Organism=Escherichia coli, GI1789267, Length=103, Percent_Identity=53.3980582524272, Blast_Score=117, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007374
- InterPro:   IPR015947
- InterPro:   IPR008314 [H]

Pfam domain/function: PF04266 ASCH [H]

EC number: NA

Molecular weight: Translated: 12260; Mature: 12260

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTP
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCC
VKLTELTEVHAKQENMTLPQLRDVIAEIYPGLEQLFMIRFRILSQ
CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTP
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCC
VKLTELTEVHAKQENMTLPQLRDVIAEIYPGLEQLFMIRFRILSQ
CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA