| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yqfB [C]
Identifier: 160875749
GI number: 160875749
Start: 3128108
End: 3128425
Strand: Reverse
Name: yqfB [C]
Synonym: Sbal195_2637
Alternate gene names: 160875749
Gene position: 3128425-3128108 (Counterclockwise)
Preceding gene: 160875751
Following gene: 160875744
Centisome position: 58.5
GC content: 44.65
Gene sequence:
>318_bases GTGTTACTCAATAAAATCACTTTTTTCGAGCGCTTTGAACACGATATCTTAAGTGGCGCGAAAACCATTACCCTGCGCGA TGAAGCCGAATCCCATGTGATAGTAGGGCAAATTCTGCCTGTGTCCACCTTCGAAACTGAACGCTGGTTTTGTGATATCC AGATTATCGATGTCACGCCAGTAAAGTTAACTGAGCTCACCGAGGTGCATGCTAAACAAGAGAATATGACTCTGCCACAG CTACGCGATGTGATTGCAGAGATTTACCCCGGTCTTGAGCAATTGTTTATGATCCGCTTTAGGATTTTGTCGCAGTAA
Upstream 100 bases:
>100_bases TCAGTTGGCGTTAAAAGCCATTATATTGCCCAGCATTATTAGTTCGATAAACTGACGTTAATGTCATTTTTATTGCTCAT GTACAATCCGAGGATAAGCT
Downstream 100 bases:
>100_bases TCTGTCACAGTAAAATGTGCAGTGAGAAATTCTCGCTAAATGCGTAAATAAAAAAGGCTGCATTGCAGCCTTTTTGTTCA TTGTTTCAATATCATGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTPVKLTELTEVHAKQENMTLPQ LRDVIAEIYPGLEQLFMIRFRILSQ
Sequences:
>Translated_105_residues MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTPVKLTELTEVHAKQENMTLPQ LRDVIAEIYPGLEQLFMIRFRILSQ >Mature_105_residues MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTPVKLTELTEVHAKQENMTLPQ LRDVIAEIYPGLEQLFMIRFRILSQ
Specific function: Unknown
COG id: COG3097
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0267 family [H]
Homologues:
Organism=Escherichia coli, GI1789267, Length=103, Percent_Identity=53.3980582524272, Blast_Score=117, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007374 - InterPro: IPR015947 - InterPro: IPR008314 [H]
Pfam domain/function: PF04266 ASCH [H]
EC number: NA
Molecular weight: Translated: 12260; Mature: 12260
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTP CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCC VKLTELTEVHAKQENMTLPQLRDVIAEIYPGLEQLFMIRFRILSQ CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLLNKITFFERFEHDILSGAKTITLRDEAESHVIVGQILPVSTFETERWFCDIQIIDVTP CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCC VKLTELTEVHAKQENMTLPQLRDVIAEIYPGLEQLFMIRFRILSQ CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA