| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is astB [H]
Identifier: 160875722
GI number: 160875722
Start: 3092037
End: 3093371
Strand: Direct
Name: astB [H]
Synonym: Sbal195_2610
Alternate gene names: 160875722
Gene position: 3092037-3093371 (Clockwise)
Preceding gene: 160875720
Following gene: 160875724
Centisome position: 57.82
GC content: 46.82
Gene sequence:
>1335_bases ATGAAGCACTTTGAAGCGAATTTTGATGGACTCGTTGGACCAACACACAATTACGCAGGGTTGTCTTTTGGCAATGTCGC CTCGCTCAGCAATGCAGCCTTAGTTTCCAACCCCAAAGCTGCTGCGAAACAAGGACTCCAAAAAGCCAAAGCACTTGCCG ATATGGGCATGGTTCAAGGTATGTTAGCCCCTCAAGAGCGCCCAGACCTCTATACATTGCGCCGAATTGGATTTTCCGGC TCTGACGCCAATGTATTAAAACAGGCCGCGAAAGAAGCGCCTATGCTGCTTAATGCCTGCTGCAGTGCGTCCAGTATGTG GACTGCTAATGCCGCAACTGTCTCACCCAGTGCAGATACGCGTGACGGCAAACTGCATTTCACCCCAGCAAATTTAGTCG ATAAACTGCATCGCAGCATCGAGCCCCTCACAACGGGGCGCATATTAACAGCAACTTTCAGTGATCCCCACTATTTTCAT CACCATAGTCACTTACCTGAGCATAATAGCTTCGGTGATGAAGGTGCGGCGAACCAGACTAGGCTATGCAACGAGTACGG CCATGCCGGTGTAGAATTGTTCGTTTATGGACAAGAAGCCACCAATCCTAATGCCCCTAAACCGCAAAAGTATCCGGCAA GACAAACCTTAGAAGCGTCAATGGCGGTGGCACGGTTACATCAACTGGAAGAGGATAATTGCGTCTTCATCCAACAGAAT CCTGATGTAATTGATCAAGGTGTATTCCATAACGATGTTATCGCAGTCGGTAACCAGAATGTGCTGTTCTATCATGAACA AGCCTTCTTAAATACCCAACATAAAATTGATGAAATTAAACGTAAGCTCGATACCGAACTGTATTTCATTGAAGTGCCCA CCGCTAAAGTGGCGATTAACGACGCAGTCAAAAGCTACTTATTCAATACCCAAATTATCACGCTTCCCTCTGGTGAAATG GCCATTATTGCCCCAACTGATTGCCAAGAAAATCCCGCAGTATTTGCCTATTTGAATGAACTACTGACGCTAAACACTCC CATCAAGCAAGTGCTTTACTTCGACGTAAAACAAAGCATGCAAAACGGCGGCGGCCCCGCCTGCCTGCGTTTGCGTGTTG CGATGAATGAGATGGAAGTGGCGGCCGTAAATCAACACACCTTAATGAATGATGCCTTATTTGCGCGTTTAAATCTTTGG GTAGACAAACATTACCGTGACAGATTGACCACCCAAGATCTTGCTGACCCTCAGCTAATCATCGAATCTCGCACTGCATT AGATGAGCTCACGCAAATAATGAAGCTAGGAAGTGTGTATCAGTTCCAGCGTTAG
Upstream 100 bases:
>100_bases ACAAAACCGTCCGCTTGTGCACTCAAAAAGCTTCAGTATACTGGGTTCCCTCAGGGACCATATGAACAAATAATAACTTT CCCTATCACAAGGATAAGCA
Downstream 100 bases:
>100_bases AATAACGCTGGCAATTTATATTTCACACTAACCAAACATAATAAAGAAAAACGCCCGAATGCTAATCGGGCGTTTTCGCT GTACTAACTAAAAACTAGAG
Product: succinylarginine dihydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKHFEANFDGLVGPTHNYAGLSFGNVASLSNAALVSNPKAAAKQGLQKAKALADMGMVQGMLAPQERPDLYTLRRIGFSG SDANVLKQAAKEAPMLLNACCSASSMWTANAATVSPSADTRDGKLHFTPANLVDKLHRSIEPLTTGRILTATFSDPHYFH HHSHLPEHNSFGDEGAANQTRLCNEYGHAGVELFVYGQEATNPNAPKPQKYPARQTLEASMAVARLHQLEEDNCVFIQQN PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQHKIDEIKRKLDTELYFIEVPTAKVAINDAVKSYLFNTQIITLPSGEM AIIAPTDCQENPAVFAYLNELLTLNTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNEMEVAAVNQHTLMNDALFARLNLW VDKHYRDRLTTQDLADPQLIIESRTALDELTQIMKLGSVYQFQR
Sequences:
>Translated_444_residues MKHFEANFDGLVGPTHNYAGLSFGNVASLSNAALVSNPKAAAKQGLQKAKALADMGMVQGMLAPQERPDLYTLRRIGFSG SDANVLKQAAKEAPMLLNACCSASSMWTANAATVSPSADTRDGKLHFTPANLVDKLHRSIEPLTTGRILTATFSDPHYFH HHSHLPEHNSFGDEGAANQTRLCNEYGHAGVELFVYGQEATNPNAPKPQKYPARQTLEASMAVARLHQLEEDNCVFIQQN PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQHKIDEIKRKLDTELYFIEVPTAKVAINDAVKSYLFNTQIITLPSGEM AIIAPTDCQENPAVFAYLNELLTLNTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNEMEVAAVNQHTLMNDALFARLNLW VDKHYRDRLTTQDLADPQLIIESRTALDELTQIMKLGSVYQFQR >Mature_444_residues MKHFEANFDGLVGPTHNYAGLSFGNVASLSNAALVSNPKAAAKQGLQKAKALADMGMVQGMLAPQERPDLYTLRRIGFSG SDANVLKQAAKEAPMLLNACCSASSMWTANAATVSPSADTRDGKLHFTPANLVDKLHRSIEPLTTGRILTATFSDPHYFH HHSHLPEHNSFGDEGAANQTRLCNEYGHAGVELFVYGQEATNPNAPKPQKYPARQTLEASMAVARLHQLEEDNCVFIQQN PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQHKIDEIKRKLDTELYFIEVPTAKVAINDAVKSYLFNTQIITLPSGEM AIIAPTDCQENPAVFAYLNELLTLNTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNEMEVAAVNQHTLMNDALFARLNLW VDKHYRDRLTTQDLADPQLIIESRTALDELTQIMKLGSVYQFQR
Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) [H]
COG id: COG3724
COG function: function code E; Succinylarginine dihydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the succinylarginine dihydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1788041, Length=444, Percent_Identity=54.7297297297297, Blast_Score=491, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007079 [H]
Pfam domain/function: PF04996 AstB [H]
EC number: =3.5.3.23 [H]
Molecular weight: Translated: 49176; Mature: 49176
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFEANFDGLVGPTHNYAGLSFGNVASLSNAALVSNPKAAAKQGLQKAKALADMGMVQG CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH MLAPQERPDLYTLRRIGFSGSDANVLKQAAKEAPMLLNACCSASSMWTANAATVSPSADT HCCCCCCCCCEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEECCCEEECCCCCC RDGKLHFTPANLVDKLHRSIEPLTTGRILTATFSDPHYFHHHSHLPEHNSFGDEGAANQT CCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH RLCNEYGHAGVELFVYGQEATNPNAPKPQKYPARQTLEASMAVARLHQLEEDNCVFIQQN HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQHKIDEIKRKLDTELYFIEVPTAKVAIN CCHHHCCCCCCCEEEECCCCEEEEEHHHHHCHHHHHHHHHHHHCCEEEEEECCCHHHHHH DAVKSYLFNTQIITLPSGEMAIIAPTDCQENPAVFAYLNELLTLNTPIKQVLYFDVKQSM HHHHHHHHCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH QNGGGPACLRLRVAMNEMEVAAVNQHTLMNDALFARLNLWVDKHYRDRLTTQDLADPQLI HCCCCCEEEEEEEECCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEE IESRTALDELTQIMKLGSVYQFQR EHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MKHFEANFDGLVGPTHNYAGLSFGNVASLSNAALVSNPKAAAKQGLQKAKALADMGMVQG CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH MLAPQERPDLYTLRRIGFSGSDANVLKQAAKEAPMLLNACCSASSMWTANAATVSPSADT HCCCCCCCCCEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEECCCEEECCCCCC RDGKLHFTPANLVDKLHRSIEPLTTGRILTATFSDPHYFHHHSHLPEHNSFGDEGAANQT CCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH RLCNEYGHAGVELFVYGQEATNPNAPKPQKYPARQTLEASMAVARLHQLEEDNCVFIQQN HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQHKIDEIKRKLDTELYFIEVPTAKVAIN CCHHHCCCCCCCEEEECCCCEEEEEHHHHHCHHHHHHHHHHHHCCEEEEEECCCHHHHHH DAVKSYLFNTQIITLPSGEMAIIAPTDCQENPAVFAYLNELLTLNTPIKQVLYFDVKQSM HHHHHHHHCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH QNGGGPACLRLRVAMNEMEVAAVNQHTLMNDALFARLNLWVDKHYRDRLTTQDLADPQLI HCCCCCEEEEEEEECCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEE IESRTALDELTQIMKLGSVYQFQR EHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA