| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875669
Identifier: 160875669
GI number: 160875669
Start: 3027500
End: 3029542
Strand: Reverse
Name: 160875669
Synonym: Sbal195_2557
Alternate gene names: NA
Gene position: 3029542-3027500 (Counterclockwise)
Preceding gene: 160875670
Following gene: 160875668
Centisome position: 56.66
GC content: 46.26
Gene sequence:
>2043_bases ATGAAAATTGTTAAAAATAGTTTTAACAAATCGGCGCTTGCTTTGGGGGTAGCGTCGGCATTGAGTTTGTTAATGATCCC AAGCGTTAATGCAATATCTTTTGATTGGGGAGAGGTTGAGGGCACATTCGACTCAACTTGGACTGCTGGTGCGAGCTGGC GTGTTGGCGCGCGCGATTGGGAAGGTCAAATTGGTAAGGTGAATCAACCCCAATTCGATTGGTCTAATTACAGCGCATTT GGCAATACAAAATATACTTCAGCTGAGATTTGGGCCCAGCCCGGGTCGTATTCCAGCAACAATGACTTAAGTAACTTACT TTATTCTCAAGGCGATACTACGTCTGAGATCGTTAAAGGTTTGCATGAATTATCGTTGAAATACAAAAACTACGGTTTAT TCGCCCGCGGTATGTATTTTTATGATCGTAAACTGAACGATGGCAATTATGACTACAACGATCCGATCACGGGTAAAGAA TTTGACCCTTGCGAAGATAGCCGCGCTTCAGAAGTACAATGTAAAGATATCCGTTTATTAGATGCGTTTGTCTATGCCAA CTTCGATTTGAATGAGGGTGCGAATCCATTATCTATTCGTGTTGGTAATCAAGTGGTGTCATGGGGTGAAAGTACACTGA TTGCCCATGGGATCAGTGAAATTAACGCCGTGGATTTGAACATTCTTAACGCACCTGGTGCTGAGTTAAAAGAAGCGTTT AGACCGCAAGGTATGGTGTGGGCATCCCTTGGCCTGACAGATTCGTTAACGGTTGAAGCATTCTATCAATATGATTGGCA ACCTATTTGGGTCCCAACTCCGGGCTCCATTTTTGCGACTAACGATTTTGCCGGTTTTGGGGGTTATGCTCAAAACGCTC AGCTTGGTTTTAACGCTAACCCCGACATCAACTTAGATTTTGTGATGCAAGAATATGAGCGTTTAGCGGGCATGATCGCC AGCGGCCAATCTATTCCGACGCAGCAATTGGTTTCTATGGCTTTAGCCTACCCAACGAAAGTGACGCTAGTGCAGGATGA AGAAGAACCAAGCAATGATGGCCAATACGGTATCAAGCTGGGTTATTACGCGCCTGAGCTAGGTGAAACCGAATTTGGTT TCTATTTCATGAATTACCATAGTCGTCGTCCACTTATCAGTGGTACTGCTGCCGACTTTAGCACAGGTGCATTGTTATCT GACTTGGCGACGGTAGGCCAAAACTCGGGCAACATCAACCGTGAACTGCTGCTTAGCCTGAAGAGCTTCTCTAAGGCGCA AATCGTTTATCCCGAAGATATTAAACTCTACGGTTTCAGCTTCAACACTTTGATTGGTGATACGTCTGTCGCGGGTGAGA TTGCCCATCGTCAAGATGAGCCACTGCAGATTGATGACGTTGAGTTGCTGTTCGCCGGTATGCCACAACAGTTAGCCAAT GCGGGGCTTCGTCCCGATCTTGATGGTATTTCACAGATTAAAGACGTTCAACCGGGTGAAACCGTCGATGGCTTTATTCG CGTGGATACCACACAGGCGCAGATGACTTTCACCCATCTATTTGGCCCAACCTTAGGTTTGGATAACTTAACTATGTTGG CCGAAGTGGGTGGTGTGTGGATCCACGATATGCCAGGTTTCGATGAGCTACGTCTCAATGGTCCCGGTACGTCACGTTCT GGCGGCAACCCAGATATGCCTGGCATCATTCAAGCCTTGCACAATGGTCCTGAAACTAACCCGTTCCCAACTGACTTTGC TTGGGGCTACCGTTTAGTGGCAAAAGCGGATTTCAACAACGTCTTTGCTGGGGTCAATATGTCGCCACGGGTCATTTTCT CCCATGACGTTGACGGTATTACTCCGGATCCTATGTTCCTGTTCACGGAAGGACGCAAGTCTGTCGCGCTAGGCGTTAAC TTCGACTATCAAAACCGTTGGGGTGCAGATATCTCCTATAACAATTTCTTTGGCGGTGTCGGTACGACGAATGCGATGGC AGATCGTGATTATGTTTCATTCAATATCAAGTATTCGATCTAA
Upstream 100 bases:
>100_bases AAGGGGATTAATTGCTGTAACAATGATGTTACCTGTGAGCTAACAAGATGTTGGTTGTAATTCCTAAAACAAAGAATCCA GCAGGGTACGGAGAGCTAAA
Downstream 100 bases:
>100_bases AAGGACTCAAACAATGAAGAAACTGACGATATTGGCGAGTGCAGTGATGTTCGCACTCGTAGCGCCAGTCGCTATGGCTA AGGTATCAGAGGCTGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MKIVKNSFNKSALALGVASALSLLMIPSVNAISFDWGEVEGTFDSTWTAGASWRVGARDWEGQIGKVNQPQFDWSNYSAF GNTKYTSAEIWAQPGSYSSNNDLSNLLYSQGDTTSEIVKGLHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKE FDPCEDSRASEVQCKDIRLLDAFVYANFDLNEGANPLSIRVGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF RPQGMVWASLGLTDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNANPDINLDFVMQEYERLAGMIA SGQSIPTQQLVSMALAYPTKVTLVQDEEEPSNDGQYGIKLGYYAPELGETEFGFYFMNYHSRRPLISGTAADFSTGALLS DLATVGQNSGNINRELLLSLKSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAGEIAHRQDEPLQIDDVELLFAGMPQQLAN AGLRPDLDGISQIKDVQPGETVDGFIRVDTTQAQMTFTHLFGPTLGLDNLTMLAEVGGVWIHDMPGFDELRLNGPGTSRS GGNPDMPGIIQALHNGPETNPFPTDFAWGYRLVAKADFNNVFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSVALGVN FDYQNRWGADISYNNFFGGVGTTNAMADRDYVSFNIKYSI
Sequences:
>Translated_680_residues MKIVKNSFNKSALALGVASALSLLMIPSVNAISFDWGEVEGTFDSTWTAGASWRVGARDWEGQIGKVNQPQFDWSNYSAF GNTKYTSAEIWAQPGSYSSNNDLSNLLYSQGDTTSEIVKGLHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKE FDPCEDSRASEVQCKDIRLLDAFVYANFDLNEGANPLSIRVGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF RPQGMVWASLGLTDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNANPDINLDFVMQEYERLAGMIA SGQSIPTQQLVSMALAYPTKVTLVQDEEEPSNDGQYGIKLGYYAPELGETEFGFYFMNYHSRRPLISGTAADFSTGALLS DLATVGQNSGNINRELLLSLKSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAGEIAHRQDEPLQIDDVELLFAGMPQQLAN AGLRPDLDGISQIKDVQPGETVDGFIRVDTTQAQMTFTHLFGPTLGLDNLTMLAEVGGVWIHDMPGFDELRLNGPGTSRS GGNPDMPGIIQALHNGPETNPFPTDFAWGYRLVAKADFNNVFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSVALGVN FDYQNRWGADISYNNFFGGVGTTNAMADRDYVSFNIKYSI >Mature_680_residues MKIVKNSFNKSALALGVASALSLLMIPSVNAISFDWGEVEGTFDSTWTAGASWRVGARDWEGQIGKVNQPQFDWSNYSAF GNTKYTSAEIWAQPGSYSSNNDLSNLLYSQGDTTSEIVKGLHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKE FDPCEDSRASEVQCKDIRLLDAFVYANFDLNEGANPLSIRVGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF RPQGMVWASLGLTDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNANPDINLDFVMQEYERLAGMIA SGQSIPTQQLVSMALAYPTKVTLVQDEEEPSNDGQYGIKLGYYAPELGETEFGFYFMNYHSRRPLISGTAADFSTGALLS DLATVGQNSGNINRELLLSLKSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAGEIAHRQDEPLQIDDVELLFAGMPQQLAN AGLRPDLDGISQIKDVQPGETVDGFIRVDTTQAQMTFTHLFGPTLGLDNLTMLAEVGGVWIHDMPGFDELRLNGPGTSRS GGNPDMPGIIQALHNGPETNPFPTDFAWGYRLVAKADFNNVFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSVALGVN FDYQNRWGADISYNNFFGGVGTTNAMADRDYVSFNIKYSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74736; Mature: 74736
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVKNSFNKSALALGVASALSLLMIPSVNAISFDWGEVEGTFDSTWTAGASWRVGARDW CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCC EGQIGKVNQPQFDWSNYSAFGNTKYTSAEIWAQPGSYSSNNDLSNLLYSQGDTTSEIVKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHH LHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKEFDPCEDSRASEVQCKDIRLL HHHHHEEECCCCEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHEEEE DAFVYANFDLNEGANPLSIRVGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF EEEEEEECCCCCCCCEEEEEECCEEECCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHH RPQGMVWASLGLTDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNAN CCCCEEEEECCCCCCEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCEECCCCC PDINLDFVMQEYERLAGMIASGQSIPTQQLVSMALAYPTKVTLVQDEEEPSNDGQYGIKL CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEE GYYAPELGETEFGFYFMNYHSRRPLISGTAADFSTGALLSDLATVGQNSGNINRELLLSL EEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH KSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAGEIAHRQDEPLQIDDVELLFAGMPQQLAN HCCCCEEEECCCCEEEEEEEEHHEECCCHHHHHHHHCCCCCCEECCHHHEECCCCHHHHH AGLRPDLDGISQIKDVQPGETVDGFIRVDTTQAQMTFTHLFGPTLGLDNLTMLAEVGGVW CCCCCCHHHHHHHHCCCCCCCCCCEEEEECCHHEEEEEECCCCCCCCCCHHHHHHHCCEE IHDMPGFDELRLNGPGTSRSGGNPDMPGIIQALHNGPETNPFPTDFAWGYRLVAKADFNN EECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC VFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSVALGVNFDYQNRWGADISYNNFFGGV EEECCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC GTTNAMADRDYVSFNIKYSI CCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MKIVKNSFNKSALALGVASALSLLMIPSVNAISFDWGEVEGTFDSTWTAGASWRVGARDW CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCC EGQIGKVNQPQFDWSNYSAFGNTKYTSAEIWAQPGSYSSNNDLSNLLYSQGDTTSEIVKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHH LHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKEFDPCEDSRASEVQCKDIRLL HHHHHEEECCCCEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHEEEE DAFVYANFDLNEGANPLSIRVGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF EEEEEEECCCCCCCCEEEEEECCEEECCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHH RPQGMVWASLGLTDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNAN CCCCEEEEECCCCCCEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCEECCCCC PDINLDFVMQEYERLAGMIASGQSIPTQQLVSMALAYPTKVTLVQDEEEPSNDGQYGIKL CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEE GYYAPELGETEFGFYFMNYHSRRPLISGTAADFSTGALLSDLATVGQNSGNINRELLLSL EEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH KSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAGEIAHRQDEPLQIDDVELLFAGMPQQLAN HCCCCEEEECCCCEEEEEEEEHHEECCCHHHHHHHHCCCCCCEECCHHHEECCCCHHHHH AGLRPDLDGISQIKDVQPGETVDGFIRVDTTQAQMTFTHLFGPTLGLDNLTMLAEVGGVW CCCCCCHHHHHHHHCCCCCCCCCCEEEEECCHHEEEEEECCCCCCCCCCHHHHHHHCCEE IHDMPGFDELRLNGPGTSRSGGNPDMPGIIQALHNGPETNPFPTDFAWGYRLVAKADFNN EECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC VFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSVALGVNFDYQNRWGADISYNNFFGGV EEECCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC GTTNAMADRDYVSFNIKYSI CCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA