| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875668
Identifier: 160875668
GI number: 160875668
Start: 3026122
End: 3027486
Strand: Reverse
Name: 160875668
Synonym: Sbal195_2556
Alternate gene names: NA
Gene position: 3027486-3026122 (Counterclockwise)
Preceding gene: 160875669
Following gene: 160875667
Centisome position: 56.62
GC content: 47.18
Gene sequence:
>1365_bases ATGAAGAAACTGACGATATTGGCGAGTGCAGTGATGTTCGCACTCGTAGCGCCAGTCGCTATGGCTAAGGTATCAGAGGC TGACGCGGCTAAACTTGGCAATGAGCTCACCCCTTTAGGTGCTGAAAAAGCAGGTAATGCTGACGGTTCTATTCCTGCTT GGGATGGTGGTATCACTAAGCCTGTAGCGGGTTATACCAAAGGGATGCATCACCCAGATCCTTTCCCTGAGGATAAGATT GAATTCACCATTACCAATGCTAACAAAGCGCAATATAAAGACTTTTTAACGCCGGGTCAGATGAAGCTGTTCGAACTTTA TCCTGATACCTACAAGATGAATGTGTATAAGACTCGCCGTAGCGCATCAGTGCCGCAGTTTGTCTATGATGCGACCAAAG CTAACGCGACACGTGCAGAATTGATTGCACAGGGCAATGGTATTTCTGGCGCTGCTATTGGTATTCCATTCCCGATCCCA GCAAATGGGTTAGAAGCGATTTGGAACCACATTTTGCGTTTTCGCGGGGTTGATATTGAGACTTCCCGTAGCCAAGCTGC ACCAACGGCCGATGGTAGCTATAGCTTAGTGGAAACCTCAGAGGAAATTCGCTTCGAATATTCTCGTCCAGAAATGACCT TAGATCTGCTTAAAGCCAGCAATACGTTGTTCTACTTTAAGCAAGTGGTGACTCAGCCAGCACGTTTAGCGGGTACTGCG TTATTGGTAAAAGAGACCATGGATCAAGAGGCGTTGCCACGCCAAGCTTGGACCTATAACACAGGGCAACGTCGTGTCCG TAAAGCGCCAAACGTCGCTTTCGATACACCGGGTACAGTGTCTGATGGTCTGCGTACGACGGATGATTTCGACATGTTTA ACGGTTCTCCAGTGCGTTATAACTGGGAACTGGTTGGCAAGAAAGAAATTTACATTCCGTACAACGATTACAAACTGCAC TCAGACAAGCTGAAATATGACCAAATCTTAAAACCTGGGCATGTTAATCCTGAGTATGTTCGTTGGGAAAAACACCGCGT ATGGCAAGTGAAGGCGACGTTGAAAGACGGTATGCGCCACATTTACAAAGTGCGCGATATGTACCTTGACGAAGATTCAT GGCAAGTGTCGATAGCCGATCTCTACGATAACCGTGATCAGCTGTATCGTGTGGCTGTTGCACATGGCTTGAACTACTAC GAAGTGCCAACTCAATGGGACACGCTGGAAGTCTTCCATGATTTGCAATCCCGTCGTTATCTCGCCATGGGTTTAGACAA CCAAAGTGGTATGTATAACTTCGATGCCAAACTGACTGAAGCTAACTTTACCCCCGATGCATTGCGTCGCGAAGGTATCC GTTAA
Upstream 100 bases:
>100_bases TATAACAATTTCTTTGGCGGTGTCGGTACGACGAATGCGATGGCAGATCGTGATTATGTTTCATTCAATATCAAGTATTC GATCTAAAAGGACTCAAACA
Downstream 100 bases:
>100_bases TACGCCACAAATAAAGGGGCGCTCTGCGCCCCTCATTAGTTTAAGGAAGTTTGTATGTCGTTTCGCATCCTTCAGTGTGT TGCTGCATTAAGTTTCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKKLTILASAVMFALVAPVAMAKVSEADAAKLGNELTPLGAEKAGNADGSIPAWDGGITKPVAGYTKGMHHPDPFPEDKI EFTITNANKAQYKDFLTPGQMKLFELYPDTYKMNVYKTRRSASVPQFVYDATKANATRAELIAQGNGISGAAIGIPFPIP ANGLEAIWNHILRFRGVDIETSRSQAAPTADGSYSLVETSEEIRFEYSRPEMTLDLLKASNTLFYFKQVVTQPARLAGTA LLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRYNWELVGKKEIYIPYNDYKLH SDKLKYDQILKPGHVNPEYVRWEKHRVWQVKATLKDGMRHIYKVRDMYLDEDSWQVSIADLYDNRDQLYRVAVAHGLNYY EVPTQWDTLEVFHDLQSRRYLAMGLDNQSGMYNFDAKLTEANFTPDALRREGIR
Sequences:
>Translated_454_residues MKKLTILASAVMFALVAPVAMAKVSEADAAKLGNELTPLGAEKAGNADGSIPAWDGGITKPVAGYTKGMHHPDPFPEDKI EFTITNANKAQYKDFLTPGQMKLFELYPDTYKMNVYKTRRSASVPQFVYDATKANATRAELIAQGNGISGAAIGIPFPIP ANGLEAIWNHILRFRGVDIETSRSQAAPTADGSYSLVETSEEIRFEYSRPEMTLDLLKASNTLFYFKQVVTQPARLAGTA LLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRYNWELVGKKEIYIPYNDYKLH SDKLKYDQILKPGHVNPEYVRWEKHRVWQVKATLKDGMRHIYKVRDMYLDEDSWQVSIADLYDNRDQLYRVAVAHGLNYY EVPTQWDTLEVFHDLQSRRYLAMGLDNQSGMYNFDAKLTEANFTPDALRREGIR >Mature_454_residues MKKLTILASAVMFALVAPVAMAKVSEADAAKLGNELTPLGAEKAGNADGSIPAWDGGITKPVAGYTKGMHHPDPFPEDKI EFTITNANKAQYKDFLTPGQMKLFELYPDTYKMNVYKTRRSASVPQFVYDATKANATRAELIAQGNGISGAAIGIPFPIP ANGLEAIWNHILRFRGVDIETSRSQAAPTADGSYSLVETSEEIRFEYSRPEMTLDLLKASNTLFYFKQVVTQPARLAGTA LLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRYNWELVGKKEIYIPYNDYKLH SDKLKYDQILKPGHVNPEYVRWEKHRVWQVKATLKDGMRHIYKVRDMYLDEDSWQVSIADLYDNRDQLYRVAVAHGLNYY EVPTQWDTLEVFHDLQSRRYLAMGLDNQSGMYNFDAKLTEANFTPDALRREGIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010752 [H]
Pfam domain/function: PF07044 DUF1329 [H]
EC number: NA
Molecular weight: Translated: 51354; Mature: 51354
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTILASAVMFALVAPVAMAKVSEADAAKLGNELTPLGAEKAGNADGSIPAWDGGITK CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVAGYTKGMHHPDPFPEDKIEFTITNANKAQYKDFLTPGQMKLFELYPDTYKMNVYKTRR CHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCCEEEEEEECCC SASVPQFVYDATKANATRAELIAQGNGISGAAIGIPFPIPANGLEAIWNHILRFRGVDIE CCCCCHHHHHHHCCCCHHHHHEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCC TSRSQAAPTADGSYSLVETSEEIRFEYSRPEMTLDLLKASNTLFYFKQVVTQPARLAGTA CCCCCCCCCCCCCEEEEECCHHHEEEECCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHH LLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRY HHHHHHHCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE NWELVGKKEIYIPYNDYKLHSDKLKYDQILKPGHVNPEYVRWEKHRVWQVKATLKDGMRH EEEEECCEEEEEECCCCEECCCCCCHHHHCCCCCCCHHHEEEECCEEEEEEHHHHHHHHH IYKVRDMYLDEDSWQVSIADLYDNRDQLYRVAVAHGLNYYEVPTQWDTLEVFHDLQSRRY HHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCEE LAMGLDNQSGMYNFDAKLTEANFTPDALRREGIR EEEECCCCCCEEECCCEEEECCCCHHHHHHCCCC >Mature Secondary Structure MKKLTILASAVMFALVAPVAMAKVSEADAAKLGNELTPLGAEKAGNADGSIPAWDGGITK CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVAGYTKGMHHPDPFPEDKIEFTITNANKAQYKDFLTPGQMKLFELYPDTYKMNVYKTRR CHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCCEEEEEEECCC SASVPQFVYDATKANATRAELIAQGNGISGAAIGIPFPIPANGLEAIWNHILRFRGVDIE CCCCCHHHHHHHCCCCHHHHHEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCC TSRSQAAPTADGSYSLVETSEEIRFEYSRPEMTLDLLKASNTLFYFKQVVTQPARLAGTA CCCCCCCCCCCCCEEEEECCHHHEEEECCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHH LLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRY HHHHHHHCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE NWELVGKKEIYIPYNDYKLHSDKLKYDQILKPGHVNPEYVRWEKHRVWQVKATLKDGMRH EEEEECCEEEEEECCCCEECCCCCCHHHHCCCCCCCHHHEEEECCEEEEEEHHHHHHHHH IYKVRDMYLDEDSWQVSIADLYDNRDQLYRVAVAHGLNYYEVPTQWDTLEVFHDLQSRRY HHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCEE LAMGLDNQSGMYNFDAKLTEANFTPDALRREGIR EEEECCCCCCEEECCCEEEECCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]