| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pssA [H]
Identifier: 160875497
GI number: 160875497
Start: 2815635
End: 2816948
Strand: Reverse
Name: pssA [H]
Synonym: Sbal195_2385
Alternate gene names: 160875497
Gene position: 2816948-2815635 (Counterclockwise)
Preceding gene: 160875498
Following gene: 160875494
Centisome position: 52.68
GC content: 46.96
Gene sequence:
>1314_bases TTGCTAGATAAGCTTGGTGGAATAGCCGTTCAACCCGAGGCTTTAACGTGGTTGCTCACGCCATGCCGTTTCAAGGCAGA ATTACTCGCTCGTATCGCGAGCGCCAAGCACAGTATTTATATTGCGGCGCTGTATTTAGAAGATGACGAAGCTGGCCGTG AAGTATTACAAGCGTTGATGGATGCCAAAGCGGCAAATCCAGCGCTTGATGTCAAAGTATTAGTGGACTTTCACCGAGCA AGACGCGGCTTGATTGGCCATAAAGGCGATAGCGGTAACTATTTGATGTACCGCAGAGTGATGGCTGAAGCCGAACATCC CATCGATATCTTAGGCGTTCCCGTTAAGTCCCGTGAATTTATGGGCGTACTGCATCTTAAAGGCTTTATTATCGATGATG CGGTGATCTATAGCGGTGCAAGCCTCAATAATATCTATTTACAACAAAATGATAAGTATCGTTTCGACCGTTATCACTTG ATTGAGTCAGCCGAATTAGCCCGCAGTATGCGCGCGATGATCCAGAAAAACATCATTGCTGATCCTGCTGTGTGTTCGTT AACCCAAGACGCTGATCAAGAAGTACTGCCGCCTAAGACGGACATGCGCAGCTTTAAGCTGAGATTGTCTGACGCTGAAT ATCAGTTTAAGGAAACCCGTGATGGCAACCGCATCACGCCGCTACTTGGGCTGGGCCGCAAGAAAAACTTACTCAATAAA GTGGTTGTCGCCTTGGTGGAAGAGTCAAAAGACTCGCTGTTTATCTGCACGCCCTATTTTAATCCGCCGTATATTTTAGT GCGCGCCTTAGCTAAGCATTTACGCAATGGCAAACGCATTGACATCGTTGTTGGCGACAAGACGGCTAACGATTTTTATA TTCCGCCTGAGCAGGACTTCTCCACTATAGGTGCCTTGCCCTATATGTATGAGCAATCATTGCGTAAGTTTGCTAAACGC CAACAGTGGGCGATTGATAATGGTCAGCTGAATATCCATCTGTGGAAACACGGCATCAACAGTTATCACCTCAAGGGCAT CAGTGCTGACGGGAATAAGCATTTGATCACAGGCTCTAACCTGAATCCAAGAGCTTGGGCGCTGGATCTTGAGAATGGTT TGTTGATCCAAGATGAAATTGGCTGCTGGAAAGCCCAGTTTGAAGCAGAGCAGACGCATATTCTTGAGCATACGCAGCGG TTATATCACTACAGCCAAGTGGATACCTTGCAGAGTTATCCTGCGCCAGTGAAGAAGATCATGACCCGAATTCGTCGCCT TAAAGCCGACTTTTTACTGCGTCGTATTCTGTAA
Upstream 100 bases:
>100_bases CAGAGGCCTATCCAGAGTTAACACATATTGCTGTGATGTTTTTATCATTGAACCCCAGTGCTTCCTATCGGGGTGGTCAG CATGATTAAAGGAGGATGCC
Downstream 100 bases:
>100_bases CACTGGGTTCTTTAGCACAACGAATTTGCCAATATTTCTGTTTAAGTACAGTTTGTTACCGATTAAAAAAGCCCACATCA ATGTGGGCTTTTTTGTTAAA
Product: phosphatidylserine synthase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MLDKLGGIAVQPEALTWLLTPCRFKAELLARIASAKHSIYIAALYLEDDEAGREVLQALMDAKAANPALDVKVLVDFHRA RRGLIGHKGDSGNYLMYRRVMAEAEHPIDILGVPVKSREFMGVLHLKGFIIDDAVIYSGASLNNIYLQQNDKYRFDRYHL IESAELARSMRAMIQKNIIADPAVCSLTQDADQEVLPPKTDMRSFKLRLSDAEYQFKETRDGNRITPLLGLGRKKNLLNK VVVALVEESKDSLFICTPYFNPPYILVRALAKHLRNGKRIDIVVGDKTANDFYIPPEQDFSTIGALPYMYEQSLRKFAKR QQWAIDNGQLNIHLWKHGINSYHLKGISADGNKHLITGSNLNPRAWALDLENGLLIQDEIGCWKAQFEAEQTHILEHTQR LYHYSQVDTLQSYPAPVKKIMTRIRRLKADFLLRRIL
Sequences:
>Translated_437_residues MLDKLGGIAVQPEALTWLLTPCRFKAELLARIASAKHSIYIAALYLEDDEAGREVLQALMDAKAANPALDVKVLVDFHRA RRGLIGHKGDSGNYLMYRRVMAEAEHPIDILGVPVKSREFMGVLHLKGFIIDDAVIYSGASLNNIYLQQNDKYRFDRYHL IESAELARSMRAMIQKNIIADPAVCSLTQDADQEVLPPKTDMRSFKLRLSDAEYQFKETRDGNRITPLLGLGRKKNLLNK VVVALVEESKDSLFICTPYFNPPYILVRALAKHLRNGKRIDIVVGDKTANDFYIPPEQDFSTIGALPYMYEQSLRKFAKR QQWAIDNGQLNIHLWKHGINSYHLKGISADGNKHLITGSNLNPRAWALDLENGLLIQDEIGCWKAQFEAEQTHILEHTQR LYHYSQVDTLQSYPAPVKKIMTRIRRLKADFLLRRIL >Mature_437_residues MLDKLGGIAVQPEALTWLLTPCRFKAELLARIASAKHSIYIAALYLEDDEAGREVLQALMDAKAANPALDVKVLVDFHRA RRGLIGHKGDSGNYLMYRRVMAEAEHPIDILGVPVKSREFMGVLHLKGFIIDDAVIYSGASLNNIYLQQNDKYRFDRYHL IESAELARSMRAMIQKNIIADPAVCSLTQDADQEVLPPKTDMRSFKLRLSDAEYQFKETRDGNRITPLLGLGRKKNLLNK VVVALVEESKDSLFICTPYFNPPYILVRALAKHLRNGKRIDIVVGDKTANDFYIPPEQDFSTIGALPYMYEQSLRKFAKR QQWAIDNGQLNIHLWKHGINSYHLKGISADGNKHLITGSNLNPRAWALDLENGLLIQDEIGCWKAQFEAEQTHILEHTQR LYHYSQVDTLQSYPAPVKKIMTRIRRLKADFLLRRIL
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI87082134, Length=421, Percent_Identity=47.5059382422803, Blast_Score=367, Evalue=1e-103, Organism=Drosophila melanogaster, GI28572961, Length=477, Percent_Identity=25.1572327044025, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016270 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 49819; Mature: 49819
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKLGGIAVQPEALTWLLTPCRFKAELLARIASAKHSIYIAALYLEDDEAGREVLQALM CCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHH DAKAANPALDVKVLVDFHRARRGLIGHKGDSGNYLMYRRVMAEAEHPIDILGVPVKSREF HHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEECCCCCHHH MGVLHLKGFIIDDAVIYSGASLNNIYLQQNDKYRFDRYHLIESAELARSMRAMIQKNIIA HEEHHHCCEEEECHHEECCCCCCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHCCC DPAVCSLTQDADQEVLPPKTDMRSFKLRLSDAEYQFKETRDGNRITPLLGLGRKKNLLNK CCHHEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCEECHHHCCCCHHHHHHH VVVALVEESKDSLFICTPYFNPPYILVRALAKHLRNGKRIDIVVGDKTANDFYIPPEQDF HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCH STIGALPYMYEQSLRKFAKRQQWAIDNGQLNIHLWKHGINSYHLKGISADGNKHLITGSN HHHCCCHHHHHHHHHHHHHHHHCEECCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCC LNPRAWALDLENGLLIQDEIGCWKAQFEAEQTHILEHTQRLYHYSQVDTLQSYPAPVKKI CCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MTRIRRLKADFLLRRIL HHHHHHHHHHHHHHHHC >Mature Secondary Structure MLDKLGGIAVQPEALTWLLTPCRFKAELLARIASAKHSIYIAALYLEDDEAGREVLQALM CCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHH DAKAANPALDVKVLVDFHRARRGLIGHKGDSGNYLMYRRVMAEAEHPIDILGVPVKSREF HHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEECCCCCHHH MGVLHLKGFIIDDAVIYSGASLNNIYLQQNDKYRFDRYHLIESAELARSMRAMIQKNIIA HEEHHHCCEEEECHHEECCCCCCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHCCC DPAVCSLTQDADQEVLPPKTDMRSFKLRLSDAEYQFKETRDGNRITPLLGLGRKKNLLNK CCHHEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCEECHHHCCCCHHHHHHH VVVALVEESKDSLFICTPYFNPPYILVRALAKHLRNGKRIDIVVGDKTANDFYIPPEQDF HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCH STIGALPYMYEQSLRKFAKRQQWAIDNGQLNIHLWKHGINSYHLKGISADGNKHLITGSN HHHCCCHHHHHHHHHHHHHHHHCEECCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCC LNPRAWALDLENGLLIQDEIGCWKAQFEAEQTHILEHTQRLYHYSQVDTLQSYPAPVKKI CCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MTRIRRLKADFLLRRIL HHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]