| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yfiP [H]
Identifier: 160875494
GI number: 160875494
Start: 2811435
End: 2812199
Strand: Reverse
Name: yfiP [H]
Synonym: Sbal195_2382
Alternate gene names: 160875494
Gene position: 2812199-2811435 (Counterclockwise)
Preceding gene: 160875497
Following gene: 160875491
Centisome position: 52.59
GC content: 48.1
Gene sequence:
>765_bases ATGGCTTTAGCCCCACATGCAGTGCACCATTTATATCAGTACCGTAAGTCTATTTCGACTAAACCCTTTGGTGCCCGTGG TAAAAAACTGATCCGCTGTCCATTATGCCTATTAGGTGAGCAGTTCTGTACCTGTGCGCTGCGCCGTCAGTTACAAACTC AAGCCAGTTTCCTGCTGATCATGTACAACGATGAAGTGTTAAAACCAACTAACAGCGGGCGCTTGATTGCGGATCTTATC CCAGATACGCACGCCTATATTTGGTCACGCACAGAACCTGAAGCGGCATTGCTTGCTTTGCTCGATTCGCCGCAATATCA ACCTTATTTAGTGTTTCCAGCCCAATATGCGGAGCAAGGACAAACAATATTGAACCAAGTGCCGATGTCGACGTTAGCCG AAGGTAAACGGCCGCTGCTGATCATGCTCGATGGCAGTTGGCGTGAAGCGATTAAAATGTTCCGCAAGAGTCCTTACTTG CATTCCTTGCCACTGCTTTCCTTCGATCCCGACACGCTGGCAACCTATGCATTACGTAAAGGCAGCCATGACTTTCAACT TGGCACCGCCGAGGTGGCATCCTTAGCATTAGGGGCGATAGGCGAAGCGGCTAATGGCAAAGCCTTAAGTACGTGGTTTG ATTTATTTGTTGAATCATCATTACTGGGCCGTAATCGACGTTGCCGTGAAGATCTTCTGCCAATCACAAACTTTACCAAT GCCTTTGAACTTGCCTTCGAACAAGCCAATAGCGGCAAGCGTTAA
Upstream 100 bases:
>100_bases TGCGCCATTTACGGCCAAGGGATAAACTGCGCCACCGCGAGAGGAAAGTGCTGAATAACTTAGCTGCAATCCCTAATAAG TTTAAAGAGAATTGGTTTTT
Downstream 100 bases:
>100_bases TTAATCTTCGAAATGAATGTGTAATATAAAAATTTAAGTTAGTGACTATCTTAAATAAAAACTCCCTTCACTTGAGGGGA GTTTTATATAGGCTAAAGTT
Product: DTW domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MALAPHAVHHLYQYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLIMYNDEVLKPTNSGRLIADLI PDTHAYIWSRTEPEAALLALLDSPQYQPYLVFPAQYAEQGQTILNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYL HSLPLLSFDPDTLATYALRKGSHDFQLGTAEVASLALGAIGEAANGKALSTWFDLFVESSLLGRNRRCREDLLPITNFTN AFELAFEQANSGKR
Sequences:
>Translated_254_residues MALAPHAVHHLYQYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLIMYNDEVLKPTNSGRLIADLI PDTHAYIWSRTEPEAALLALLDSPQYQPYLVFPAQYAEQGQTILNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYL HSLPLLSFDPDTLATYALRKGSHDFQLGTAEVASLALGAIGEAANGKALSTWFDLFVESSLLGRNRRCREDLLPITNFTN AFELAFEQANSGKR >Mature_253_residues ALAPHAVHHLYQYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLIMYNDEVLKPTNSGRLIADLIP DTHAYIWSRTEPEAALLALLDSPQYQPYLVFPAQYAEQGQTILNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYLH SLPLLSFDPDTLATYALRKGSHDFQLGTAEVASLALGAIGEAANGKALSTWFDLFVESSLLGRNRRCREDLLPITNFTNA FELAFEQANSGKR
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DTW family [H]
Homologues:
Organism=Escherichia coli, GI87082133, Length=221, Percent_Identity=44.3438914027149, Blast_Score=189, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005636 [H]
Pfam domain/function: PF03942 DTW [H]
EC number: NA
Molecular weight: Translated: 28446; Mature: 28315
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAPHAVHHLYQYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLI CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEE MYNDEVLKPTNSGRLIADLIPDTHAYIWSRTEPEAALLALLDSPQYQPYLVFPAQYAEQG EECCCEECCCCCCCEEEECCCCCHHEEECCCCCHHHHHHHHCCCCCCCEEEECHHHHHHH QTILNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYLHSLPLLSFDPDTLATYALRK HHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHC GSHDFQLGTAEVASLALGAIGEAANGKALSTWFDLFVESSLLGRNRRCREDLLPITNFTN CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCH AFELAFEQANSGKR HHHHHHHHHCCCCC >Mature Secondary Structure ALAPHAVHHLYQYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLI CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEE MYNDEVLKPTNSGRLIADLIPDTHAYIWSRTEPEAALLALLDSPQYQPYLVFPAQYAEQG EECCCEECCCCCCCEEEECCCCCHHEEECCCCCHHHHHHHHCCCCCCCEEEECHHHHHHH QTILNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYLHSLPLLSFDPDTLATYALRK HHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHC GSHDFQLGTAEVASLALGAIGEAANGKALSTWFDLFVESSLLGRNRRCREDLLPITNFTN CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCH AFELAFEQANSGKR HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]