Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is yfcA [C]

Identifier: 160874792

GI number: 160874792

Start: 2020381

End: 2021151

Strand: Direct

Name: yfcA [C]

Synonym: Sbal195_1675

Alternate gene names: 160874792

Gene position: 2020381-2021151 (Clockwise)

Preceding gene: 160874790

Following gene: 160874793

Centisome position: 37.78

GC content: 47.47

Gene sequence:

>771_bases
ATGGAATTTGAACTGACTCTACAAATCGCAGCGATACTTTTTGCCGTCGCTATGGTGGCTGGTTTTATCGACTCTATCGC
CGGTGGTGGTGGCTTGTTGACGATCCCTGCACTCATGTGGGCAGGCTTGCCGCCTGCGGTTGCCTTAGGCACAAATAAGC
TGCAGGCCTGTGGTGGTAGTTTTTTTGCGAGCTTGTATTTCGTCCGCAAAGGGTTAGTGGATCTTAAATCCGTAAAGTTA
GCTTTGATTTGTGCGTTTATCGGCGCGGCATTGGGAACGATTCTCGTTCAACTCGTCGATACTAAAGTGCTGGAGTTAAT
GTTGCCATTCTTGATTTTGGCAATTGGTTGTTACTTCTTATTTTCGAAAAAGATTTCTGAAGACGATAAGCATCAAGTAC
TGACACCTACCGCGTTTGCGTTCACTGCCGCGTTAGGTGTGGGATTGTACGATGGTTTTTTTGGTCCTGGCACTGGCAGC
TTTTTTGCGCTGGCGTTTGTATCGTTAGCGGGGTTTGGTCTGGCTAAGGCTACGGCTCACGCGAAACTACTTAATTTCTC
AACCAATATTGCTTCACTGATCTTCTTCGCCTTGGGCGGCAAAGTGATTTGGTTATTGGGGTTGGTTATGCTCGTAGGAC
AAGCGATTGGCGCAACTTTGGGTTCTCGTCTGGTTGTGACTAAAGGCACGAAGATCATCAAGCCGCTCGTCGTGACTATG
TCCCTTGCCATGAGCTTTAAACTCCTCGCAACGCAATATCACTTGTTCTAA

Upstream 100 bases:

>100_bases
CTCACGCAGTGGCGACAATAACTCCTTTGCGTTTATTTGGCAAACGCAGTCTAATGCTGAGCAATTACTCCCTTTTTTAT
CAGAAGAATAATAAATCATT

Downstream 100 bases:

>100_bases
TTGATTGTTTCTTATCAATAAGCGCAGCCTTAAACGGCGGATTAGTTAATTTTCGCGCGTAAGCTTAAGTTATTTTATTT
TTATCTTATCTGAGTGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MEFELTLQIAAILFAVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYFVRKGLVDLKSVKL
ALICAFIGAALGTILVQLVDTKVLELMLPFLILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGS
FFALAFVSLAGFGLAKATAHAKLLNFSTNIASLIFFALGGKVIWLLGLVMLVGQAIGATLGSRLVVTKGTKIIKPLVVTM
SLAMSFKLLATQYHLF

Sequences:

>Translated_256_residues
MEFELTLQIAAILFAVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYFVRKGLVDLKSVKL
ALICAFIGAALGTILVQLVDTKVLELMLPFLILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGS
FFALAFVSLAGFGLAKATAHAKLLNFSTNIASLIFFALGGKVIWLLGLVMLVGQAIGATLGSRLVVTKGTKIIKPLVVTM
SLAMSFKLLATQYHLF
>Mature_256_residues
MEFELTLQIAAILFAVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYFVRKGLVDLKSVKL
ALICAFIGAALGTILVQLVDTKVLELMLPFLILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGS
FFALAFVSLAGFGLAKATAHAKLLNFSTNIASLIFFALGGKVIWLLGLVMLVGQAIGATLGSRLVVTKGTKIIKPLVVTM
SLAMSFKLLATQYHLF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=242, Percent_Identity=58.2644628099173, Blast_Score=259, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26851; Mature: 26851

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]