Click here to switch to the map view.

The map label for this gene is tonB [H]

Identifier: 160874783

GI number: 160874783

Start: 2013017

End: 2013637

Strand: Direct

Name: tonB [H]

Synonym: Sbal195_1666

Alternate gene names: 160874783

Gene position: 2013017-2013637 (Clockwise)

Preceding gene: 160874782

Following gene: 160874784

Centisome position: 37.65

GC content: 46.7

Gene sequence:

>621_bases
ATGCTAAGAGCACTAGTATCGATCATTATTGGTGCTGCTGTGACTTTTGGTCTGTTCGCTTTTATGGCGTTCTTGGTCGG
TGGCGGCGCACAGCGCGGCGAAACATCGGCCGAGACCCCTGTAATTGAAATCACTATGGATAGACAGGATTCAAAAGCAC
AGAATAAGCCAAGGGTAGTGCCTAAGCCACCACCACCACCAGAGCAACCACAGAAGCCTGATACAACGCCACCTGATTCA
TCAAGTAATATTGATACAGCAATGTCGTTCAATATGGGTGGTGTAGAGGCTGGTGGTGCAAGTACTGGTTTTAAATTAGG
CAACATGATGACTCGCGATGGTGATGCTACGCCTATCGTTCGTATCGAACCACAGTATCCAATTGCTGCGGCTCGTGATG
GTAAAGAAGGTTGGGTACAACTTCGCTTCACTATCAACGAACTCGGTGGTATCGATGACGTTGAAGTTATTCAAGCAGAG
CCAAAACGTTTATTTGATAAAGAAGCGATCCGAGCACTGAAGAAGTGGAAGTACAAGCCAAAGATTGTTGATGGCAAGCC
ACTGAAGCAACCAGGTCAGACGGTTCAGCTGGACTTTACCTTAGATAAAGGAGGCAAATAA

Upstream 100 bases:

>100_bases
GCTGATAAAGACGCAATGCACGGCTTAGTTGTTAAAGTTCTAGACCAAGTGAAAGCAGCTGGTATAGATAAAATTTCGGT
ATCTGCGGGGAACGATTAAT

Downstream 100 bases:

>100_bases
CGATGCGTAATGTTAATAAAATCGCAGCTCTATTATTGCTTTCTATTTGTGGCGGATTATCTGTTTCATCTGCGGTAGCA
GCTGAAAAGTGTGAGATCGA

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLRALVSIIIGAAVTFGLFAFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVVPKPPPPPEQPQKPDTTPPDS
SSNIDTAMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIVRIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAE
PKRLFDKEAIRALKKWKYKPKIVDGKPLKQPGQTVQLDFTLDKGGK

Sequences:

>Translated_206_residues
MLRALVSIIIGAAVTFGLFAFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVVPKPPPPPEQPQKPDTTPPDS
SSNIDTAMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIVRIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAE
PKRLFDKEAIRALKKWKYKPKIVDGKPLKQPGQTVQLDFTLDKGGK
>Mature_206_residues
MLRALVSIIIGAAVTFGLFAFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVVPKPPPPPEQPQKPDTTPPDS
SSNIDTAMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIVRIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAE
PKRLFDKEAIRALKKWKYKPKIVDGKPLKQPGQTVQLDFTLDKGGK

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 22277; Mature: 22277

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRALVSIIIGAAVTFGLFAFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PKPPPPPEQPQKPDTTPPDSSSNIDTAMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCCEEECCCCCCCEE
RIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAEPKRLFDKEAIRALKKWKYKP
EECCCCCEEECCCCCCCEEEEEEEEHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCC
KIVDGKPLKQPGQTVQLDFTLDKGGK
CCCCCCCCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MLRALVSIIIGAAVTFGLFAFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PKPPPPPEQPQKPDTTPPDSSSNIDTAMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCCEEECCCCCCCEE
RIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAEPKRLFDKEAIRALKKWKYKP
EECCCCCEEECCCCCCCEEEEEEEEHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCC
KIVDGKPLKQPGQTVQLDFTLDKGGK
CCCCCCCCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8704984; 10984043 [H]