| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874730
Identifier: 160874730
GI number: 160874730
Start: 1946135
End: 1948327
Strand: Reverse
Name: 160874730
Synonym: Sbal195_1613
Alternate gene names: NA
Gene position: 1948327-1946135 (Counterclockwise)
Preceding gene: 160874731
Following gene: 160874729
Centisome position: 36.44
GC content: 44.96
Gene sequence:
>2193_bases ATGATGAAACGGTTCAATTTCAATGCCGCAACAAAAGCGATGTTGGGTGCCGGTTTACTCTCTCTACTACTCGCCGGTTG CGGTGGTAGTGACGGTAAAGATGGTGAAGACGGTAAACCGGGTGTTGTTGGTGTCAATATCGATACAACTCCTACACTGA AAGCAAGTTTCACTAATGCCACTATCGATGCAGGTAAGGTTACAGTCGATTTCACATTAGAAAATGCGAATGGCGTAGCA GTACTAGGCTTAAATAAAGATCACGACATACGTTTTGGTATTGCACAGCTTAGCCACGTTACAGTAGCAACTGAGGATCC AGCCAAACCCGCTGACCGCGGTTACCAATGGCAAGCTTATATCAATGCCAAAAAAGAGCCTGGCACAGTGCCTTCTGGCG TGGATAACCTCAATCCATCAGCTCAATATCAAGCCAACGTTGAAGCCGCTGCCAAGTGTGATACCTGTTTAGTGAATCAT GGTGATGGTAACTACAGCTATACCTATCAAGCCAATATCGCCAATGTCACTGAACCCTTAGCGATTACTTACAGTGCTGA AGCGACTCAACGGGCAACATTAGAACTTGAATTACCACAACTTGCTGCCAACGCACATTTTGATTGGCAACCTTCTACAG GCAAAACTGAAGGTATTCAAACACGCAACGTTGTTTCAATAACAGCCTGTTATACCTGTCACCAACCAGAAAGTTTGGAG CTACACGGTGGCCGTAGAGTTGATATTGAGAACTGTGCATCTTGTCATACGGCAACTTCTGGCGATCCTGAGTCAGGTAA TAGCATTGAATTTACATACATGATCCATGCTATCCACAAAGGTGGCGAACGTCATACCTTTGATGAGACAGGCGCTGAAG TACCAGCACCTTACAAGATTGTCGGTTATGGCGGTAAAGTGATTGACTACGGCAAGGTCGGTTTCCCATTAAAACCTGCA GCGGATTGCGCAGCCTGTCACGTTGAAGGAGCGGGTGCACCAGCTAATGCCGATTTATTTAAAGCCGACTTAAGCAATCA AGCCTGTATTGGTTGCCACACAGAAAAACCGTCTGCTCACCACAGCAGCAGTGATTGTGTCGCTTGTCATAATGCAACTG AACCATACAATGGCACAGGTAGTGCAGCTAAACGTCATGGTGATGTGCTGAAAGCTTACACAGAAACTAAAGCCATGGGC ATTAAGTTCACTAATGTCGGCGTGAATGACACGGGCAAAATCACTTTTGATGTCCAAGTTGTTGACAAAGATGGCAATGC CATTGATAAAGCCTTCGTAAATCAAAGCTCACGCGTTGTCGTAGCATGGGATTCTGATAAAGATTACCCAAGCTATGCTG ATGCCTCTTATAGCAATCGTCGTATCGCTTTAAGTGAAGGTACCTATAATGAAGCGAATAAAACCTACTCATTAACAGGC ACTAAGTTCAGTTTACCCGCTGATGCAAATGGTAAAACATTCGAGCTGTGGTCAACATTAGAAGTGTGCTTCAACAATGG CGGTTATGGCGTTGCTGACGTAGCTATGACAGATTGCTCTGCTGACAGTGTAAGTAAAGTCGCGGTTAAACAAGCCCCAT ATCATTTCGTTTGGAAAGATACGGGAGTGGACAACACTGCCAAGGCAGCGACACGTCGCGACATTATTGATGCAACTAAG TGTCAAGGTTGTCACAATCAAGAAATCCACCACTATGACAACGGTGTAAATTGCCAAACTTGCCATACTTCGGATAAAAC CTTGAAAAGTGATGCCAACTATCCTGGCGGTAAGATCCCAACTAGCTTCGCGTGGAAAGCTCACGAACGTGAAGGCCATT ACCTGAAATATGCGGGTGTACAATCAGGCACTGTGCTAAAAACCGATTGTGCGACATGCCATACAGTTGATAAAGCAAAC GTCATTACAGGTATTACCTTAGGACGTCAGCCTAATCGCACATGGCGCTACGGTGATATCAATAATAACGGTGCCGATAT TTGGGTATCTTCAGATGCGGGTGCGTGTTTAAGCTGTCACCAAAAATATCTGAGTGATGCGACAAAATCTCACATTGAGA CTAACGGTGGTATTTTAAATGGCAGTAGTGCAGCCGATGTGCAAACTCGTGCATCAGAAAGCTGTGCAACTTGTCATACC CCAGCTCAATTAAGTAAAGTTCACGGTAATTAA
Upstream 100 bases:
>100_bases ACAGATGGAAAACTAATTCCACACATCTTATGCGGGTAATGAGATTTATTCTTATCTACCAAGCGTTTGATGATGATTAC AACTATTGCAGGGAAATATC
Downstream 100 bases:
>100_bases GCAGATATAACGCTCTCATTCAGAGCAATGTTTTATCGTTACTAAAGAGAGAGGTTTTTACCTCTCTCTTTATATTCTTG CCATTTAAAAATCCGCTGTT
Product: decaheme cytochrome c
Products: NA
Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; Decaheme Cytochrome C-Like Protein
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MMKRFNFNAATKAMLGAGLLSLLLAGCGGSDGKDGEDGKPGVVGVNIDTTPTLKASFTNATIDAGKVTVDFTLENANGVA VLGLNKDHDIRFGIAQLSHVTVATEDPAKPADRGYQWQAYINAKKEPGTVPSGVDNLNPSAQYQANVEAAAKCDTCLVNH GDGNYSYTYQANIANVTEPLAITYSAEATQRATLELELPQLAANAHFDWQPSTGKTEGIQTRNVVSITACYTCHQPESLE LHGGRRVDIENCASCHTATSGDPESGNSIEFTYMIHAIHKGGERHTFDETGAEVPAPYKIVGYGGKVIDYGKVGFPLKPA ADCAACHVEGAGAPANADLFKADLSNQACIGCHTEKPSAHHSSSDCVACHNATEPYNGTGSAAKRHGDVLKAYTETKAMG IKFTNVGVNDTGKITFDVQVVDKDGNAIDKAFVNQSSRVVVAWDSDKDYPSYADASYSNRRIALSEGTYNEANKTYSLTG TKFSLPADANGKTFELWSTLEVCFNNGGYGVADVAMTDCSADSVSKVAVKQAPYHFVWKDTGVDNTAKAATRRDIIDATK CQGCHNQEIHHYDNGVNCQTCHTSDKTLKSDANYPGGKIPTSFAWKAHEREGHYLKYAGVQSGTVLKTDCATCHTVDKAN VITGITLGRQPNRTWRYGDINNNGADIWVSSDAGACLSCHQKYLSDATKSHIETNGGILNGSSAADVQTRASESCATCHT PAQLSKVHGN
Sequences:
>Translated_730_residues MMKRFNFNAATKAMLGAGLLSLLLAGCGGSDGKDGEDGKPGVVGVNIDTTPTLKASFTNATIDAGKVTVDFTLENANGVA VLGLNKDHDIRFGIAQLSHVTVATEDPAKPADRGYQWQAYINAKKEPGTVPSGVDNLNPSAQYQANVEAAAKCDTCLVNH GDGNYSYTYQANIANVTEPLAITYSAEATQRATLELELPQLAANAHFDWQPSTGKTEGIQTRNVVSITACYTCHQPESLE LHGGRRVDIENCASCHTATSGDPESGNSIEFTYMIHAIHKGGERHTFDETGAEVPAPYKIVGYGGKVIDYGKVGFPLKPA ADCAACHVEGAGAPANADLFKADLSNQACIGCHTEKPSAHHSSSDCVACHNATEPYNGTGSAAKRHGDVLKAYTETKAMG IKFTNVGVNDTGKITFDVQVVDKDGNAIDKAFVNQSSRVVVAWDSDKDYPSYADASYSNRRIALSEGTYNEANKTYSLTG TKFSLPADANGKTFELWSTLEVCFNNGGYGVADVAMTDCSADSVSKVAVKQAPYHFVWKDTGVDNTAKAATRRDIIDATK CQGCHNQEIHHYDNGVNCQTCHTSDKTLKSDANYPGGKIPTSFAWKAHEREGHYLKYAGVQSGTVLKTDCATCHTVDKAN VITGITLGRQPNRTWRYGDINNNGADIWVSSDAGACLSCHQKYLSDATKSHIETNGGILNGSSAADVQTRASESCATCHT PAQLSKVHGN >Mature_730_residues MMKRFNFNAATKAMLGAGLLSLLLAGCGGSDGKDGEDGKPGVVGVNIDTTPTLKASFTNATIDAGKVTVDFTLENANGVA VLGLNKDHDIRFGIAQLSHVTVATEDPAKPADRGYQWQAYINAKKEPGTVPSGVDNLNPSAQYQANVEAAAKCDTCLVNH GDGNYSYTYQANIANVTEPLAITYSAEATQRATLELELPQLAANAHFDWQPSTGKTEGIQTRNVVSITACYTCHQPESLE LHGGRRVDIENCASCHTATSGDPESGNSIEFTYMIHAIHKGGERHTFDETGAEVPAPYKIVGYGGKVIDYGKVGFPLKPA ADCAACHVEGAGAPANADLFKADLSNQACIGCHTEKPSAHHSSSDCVACHNATEPYNGTGSAAKRHGDVLKAYTETKAMG IKFTNVGVNDTGKITFDVQVVDKDGNAIDKAFVNQSSRVVVAWDSDKDYPSYADASYSNRRIALSEGTYNEANKTYSLTG TKFSLPADANGKTFELWSTLEVCFNNGGYGVADVAMTDCSADSVSKVAVKQAPYHFVWKDTGVDNTAKAATRRDIIDATK CQGCHNQEIHHYDNGVNCQTCHTSDKTLKSDANYPGGKIPTSFAWKAHEREGHYLKYAGVQSGTVLKTDCATCHTVDKAN VITGITLGRQPNRTWRYGDINNNGADIWVSSDAGACLSCHQKYLSDATKSHIETNGGILNGSSAADVQTRASESCATCHT PAQLSKVHGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77747; Mature: 77747
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRFNFNAATKAMLGAGLLSLLLAGCGGSDGKDGEDGKPGVVGVNIDTTPTLKASFTNA CCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCC TIDAGKVTVDFTLENANGVAVLGLNKDHDIRFGIAQLSHVTVATEDPAKPADRGYQWQAY EEECCEEEEEEEEECCCCEEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCEEEEEE INAKKEPGTVPSGVDNLNPSAQYQANVEAAAKCDTCLVNHGDGNYSYTYQANIANVTEPL EECCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCE AITYSAEATQRATLELELPQLAANAHFDWQPSTGKTEGIQTRNVVSITACYTCHQPESLE EEEEECCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEE LHGGRRVDIENCASCHTATSGDPESGNSIEFTYMIHAIHKGGERHTFDETGAEVPAPYKI ECCCEEECHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEE VGYGGKVIDYGKVGFPLKPAADCAACHVEGAGAPANADLFKADLSNQACIGCHTEKPSAH EECCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHEEECCCCCEEEEEECCCCCCC HSSSDCVACHNATEPYNGTGSAAKRHGDVLKAYTETKAMGIKFTNVGVNDTGKITFDVQV CCCCCEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHEEEEEEEECCCCCCCEEEEEEEE VDKDGNAIDKAFVNQSSRVVVAWDSDKDYPSYADASYSNRRIALSEGTYNEANKTYSLTG EECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECC TKFSLPADANGKTFELWSTLEVCFNNGGYGVADVAMTDCSADSVSKVAVKQAPYHFVWKD CEEECCCCCCCCEEEHHEEEEEHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCEEEEEEC TGVDNTAKAATRRDIIDATKCQGCHNQEIHHYDNGVNCQTCHTSDKTLKSDANYPGGKIP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEECCCCCHHHCCCCCCCCCCC TSFAWKAHEREGHYLKYAGVQSGTVLKTDCATCHTVDKANVITGITLGRQPNRTWRYGDI CCEEEEECCCCCCEEEEECCCCCCEEEECCCCEEECCCCCEEEEEEECCCCCCCEEECCC NNNGADIWVSSDAGACLSCHQKYLSDATKSHIETNGGILNGSSAADVQTRASESCATCHT CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEECCCCEECCCCCCCHHHHCCCCCCCCCC PAQLSKVHGN CHHHHHCCCC >Mature Secondary Structure MMKRFNFNAATKAMLGAGLLSLLLAGCGGSDGKDGEDGKPGVVGVNIDTTPTLKASFTNA CCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCC TIDAGKVTVDFTLENANGVAVLGLNKDHDIRFGIAQLSHVTVATEDPAKPADRGYQWQAY EEECCEEEEEEEEECCCCEEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCEEEEEE INAKKEPGTVPSGVDNLNPSAQYQANVEAAAKCDTCLVNHGDGNYSYTYQANIANVTEPL EECCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCE AITYSAEATQRATLELELPQLAANAHFDWQPSTGKTEGIQTRNVVSITACYTCHQPESLE EEEEECCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEE LHGGRRVDIENCASCHTATSGDPESGNSIEFTYMIHAIHKGGERHTFDETGAEVPAPYKI ECCCEEECHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEE VGYGGKVIDYGKVGFPLKPAADCAACHVEGAGAPANADLFKADLSNQACIGCHTEKPSAH EECCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHEEECCCCCEEEEEECCCCCCC HSSSDCVACHNATEPYNGTGSAAKRHGDVLKAYTETKAMGIKFTNVGVNDTGKITFDVQV CCCCCEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHEEEEEEEECCCCCCCEEEEEEEE VDKDGNAIDKAFVNQSSRVVVAWDSDKDYPSYADASYSNRRIALSEGTYNEANKTYSLTG EECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECC TKFSLPADANGKTFELWSTLEVCFNNGGYGVADVAMTDCSADSVSKVAVKQAPYHFVWKD CEEECCCCCCCCEEEHHEEEEEHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCEEEEEEC TGVDNTAKAATRRDIIDATKCQGCHNQEIHHYDNGVNCQTCHTSDKTLKSDANYPGGKIP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEECCCCCHHHCCCCCCCCCCC TSFAWKAHEREGHYLKYAGVQSGTVLKTDCATCHTVDKANVITGITLGRQPNRTWRYGDI CCEEEEECCCCCCEEEEECCCCCCEEEECCCCEEECCCCCEEEEEEECCCCCCCEEECCC NNNGADIWVSSDAGACLSCHQKYLSDATKSHIETNGGILNGSSAADVQTRASESCATCHT CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEECCCCEECCCCCCCHHHHCCCCCCCCCC PAQLSKVHGN CHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA