| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874729
Identifier: 160874729
GI number: 160874729
Start: 1943841
End: 1945793
Strand: Reverse
Name: 160874729
Synonym: Sbal195_1612
Alternate gene names: NA
Gene position: 1945793-1943841 (Counterclockwise)
Preceding gene: 160874730
Following gene: 160874728
Centisome position: 36.39
GC content: 48.23
Gene sequence:
>1953_bases ATGATGAACGCACAAACAACTAAAATCGCACTGCTGTTAGCAGCAAGTGCAGTCACTATGGCCTTAGCTGGCTGTGGTGG CAGCGATGGTAATGATGGTAATCCCGGTGAACCTGGTGGTGAACCTGCTCCAGCGATTCAAACCCTTAATTTCACGTTTG ATAAATCTGTCATCACTAACGGTGTACCGAGTGTTGAGTTTACCGTCACTAACGAAAATGATTTACCCGTCGTTGGTCTC CAAAAAATGCGCTTCGCCGCAGCACAGTTGATCCCACAAGGTGCGACTGGTGCTGGTAATGCCTCACAATGGCAATACTT TGGTGATGAAACCTGCGATGTCGCAGCAACATGCCCAGGGACCTTTGTTGACCAGAAAAACGGTCACTACAGCTATACCT TCAACATGAACCTGACCGCTAACGCTAAAATCACCTACAACGATCAGTTAGCTCAACGGGTGTTAATCCGCGCTTATAAC ACGCCGTTACCCGATGGTACTCAAGTCCCTAACAGTAACGCCTTTGTCGACTTTACTGCCGATACCGGTGCTGCACCGAC ATACAGCCGCAAAATTGTTGCCACTGAAAGCTGTAATACCTGTCACCAAGATTTAGCCAATGTGAAACACGGCGGCGCGT ACTCAGATGTTAACTACTGTGCAACTTGCCACACAGCTGGCAAAGTTGGCGTAGGTAAAGAGTTCAATGTTCTCGTTCAC GCTAAACACAAAGACCTGACTTTAGGTTCATTGGAAAGCTGCCAAAGCTGTCATGCTGCAAACGATGCCGCGCCAGATTG GGGTAATTGGTCACGTATTCCAACTGCCGCTACCTGTGGAAGCTGTCATAGCACAGTGGACTTCGCCGCAGGTAAAGGCC ATTCACAACAGCTAGATAACTCTAACTGTATCGCCTGTCATAACAGCGACTGGACTGCCGAGCTACACACAGGCAAGACT GCTGACAAGAAAGCCGTTATCGCTCAGTTAGGTATGCAAGCAACACTCGTGGGTCAAACTGATGATACTGCGGTATTAAC CGTCTCTATCTTAGACAAAGACGGTAACGCGATTGATGCGGCAACGGTCCAAGACAAGATTAAACGTTTAGAAACTGTCA CTAACGTTGGCCCTAACTTCCCAATTATGGGTTACAACAAGAGCCCTGGTAGTGGTGCTGCGAAAATTGCTAAAGACTTA GTCAAAGATGGCGCACTGCAAGATGGCGTGACCTTAGTTGACGGCAAACTGGTTTTCACTACACCTGCCCTGCCTTTCGG TACTGGCGATACAGATACGGCCTTTACTTTTATCGGTCTGGAAATGTGTAGCACAGGTACTAGCTTAACGGCATGTACCG TTGATAGCGCAACCACCAGTATGAAAGCAGAGCTCGCCTTTGGTACTAAATCAGGCAACGCCCCAAGCATGCGCCATGTT AACTCAGTTAACTTCAGCACCTGTCAAGGCTGTCACAGCGATACCTTTGAAATCCACAAAGGCCACCATTCAGGTTTTGT GATGACAGAGCAAGTATCACACGCAAAAGATGCGAACGGTAAAGCGATCGTCGGTGTTGATGGTTGTGTCGCGTGTCATA CACCTGATGGTACTTATGCTTCTGGTGCTAACAAAGGCGCATTCGAGATGAAACTGCACGTGATCCACGGCGAGCAAGGT GTCATCAAAGAATGTACCCAATGTCACAACGATTTCAACCTAGATGCATTCAAAGTGAAAGGCGCGCTGGCAACATCAGC AGGTAAATACACCACGCCAATCACAGCCACTTGTACTTCATGCCACGCGCCAGAATCCATTGGCCACGGCTTAGAAAACA TGGGCGCGATTGTGAACGGTGATTATGTTCAAGCTAACCAAGCGGCGCAGTCAGAAACCTGTTTCTACTGTCACAAACCC ACACCAACAGATCACACTCAGGTGAAAATGTAA
Upstream 100 bases:
>100_bases ATCCACTTAAGTCGCTTCTAGTGACCAAAAACACAGACATAGAATCTGTTGGCTCTAGAACACAGCGTTTAAGCAATGCC AAACCTATGCAGGGAAAAAA
Downstream 100 bases:
>100_bases TTTGCCCAAGCAGGGGGAGTTCGCTCCCCCTTTCTTGAATTTTGTTGGGACAAATTGGGAAGCCTATTATGAAGAACAGC CTAAAAATGAAAAACCTACT
Product: decaheme cytochrome c
Products: NA
Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; Decaheme Cytochrome C-Like Protein
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MMNAQTTKIALLLAASAVTMALAGCGGSDGNDGNPGEPGGEPAPAIQTLNFTFDKSVITNGVPSVEFTVTNENDLPVVGL QKMRFAAAQLIPQGATGAGNASQWQYFGDETCDVAATCPGTFVDQKNGHYSYTFNMNLTANAKITYNDQLAQRVLIRAYN TPLPDGTQVPNSNAFVDFTADTGAAPTYSRKIVATESCNTCHQDLANVKHGGAYSDVNYCATCHTAGKVGVGKEFNVLVH AKHKDLTLGSLESCQSCHAANDAAPDWGNWSRIPTAATCGSCHSTVDFAAGKGHSQQLDNSNCIACHNSDWTAELHTGKT ADKKAVIAQLGMQATLVGQTDDTAVLTVSILDKDGNAIDAATVQDKIKRLETVTNVGPNFPIMGYNKSPGSGAAKIAKDL VKDGALQDGVTLVDGKLVFTTPALPFGTGDTDTAFTFIGLEMCSTGTSLTACTVDSATTSMKAELAFGTKSGNAPSMRHV NSVNFSTCQGCHSDTFEIHKGHHSGFVMTEQVSHAKDANGKAIVGVDGCVACHTPDGTYASGANKGAFEMKLHVIHGEQG VIKECTQCHNDFNLDAFKVKGALATSAGKYTTPITATCTSCHAPESIGHGLENMGAIVNGDYVQANQAAQSETCFYCHKP TPTDHTQVKM
Sequences:
>Translated_650_residues MMNAQTTKIALLLAASAVTMALAGCGGSDGNDGNPGEPGGEPAPAIQTLNFTFDKSVITNGVPSVEFTVTNENDLPVVGL QKMRFAAAQLIPQGATGAGNASQWQYFGDETCDVAATCPGTFVDQKNGHYSYTFNMNLTANAKITYNDQLAQRVLIRAYN TPLPDGTQVPNSNAFVDFTADTGAAPTYSRKIVATESCNTCHQDLANVKHGGAYSDVNYCATCHTAGKVGVGKEFNVLVH AKHKDLTLGSLESCQSCHAANDAAPDWGNWSRIPTAATCGSCHSTVDFAAGKGHSQQLDNSNCIACHNSDWTAELHTGKT ADKKAVIAQLGMQATLVGQTDDTAVLTVSILDKDGNAIDAATVQDKIKRLETVTNVGPNFPIMGYNKSPGSGAAKIAKDL VKDGALQDGVTLVDGKLVFTTPALPFGTGDTDTAFTFIGLEMCSTGTSLTACTVDSATTSMKAELAFGTKSGNAPSMRHV NSVNFSTCQGCHSDTFEIHKGHHSGFVMTEQVSHAKDANGKAIVGVDGCVACHTPDGTYASGANKGAFEMKLHVIHGEQG VIKECTQCHNDFNLDAFKVKGALATSAGKYTTPITATCTSCHAPESIGHGLENMGAIVNGDYVQANQAAQSETCFYCHKP TPTDHTQVKM >Mature_650_residues MMNAQTTKIALLLAASAVTMALAGCGGSDGNDGNPGEPGGEPAPAIQTLNFTFDKSVITNGVPSVEFTVTNENDLPVVGL QKMRFAAAQLIPQGATGAGNASQWQYFGDETCDVAATCPGTFVDQKNGHYSYTFNMNLTANAKITYNDQLAQRVLIRAYN TPLPDGTQVPNSNAFVDFTADTGAAPTYSRKIVATESCNTCHQDLANVKHGGAYSDVNYCATCHTAGKVGVGKEFNVLVH AKHKDLTLGSLESCQSCHAANDAAPDWGNWSRIPTAATCGSCHSTVDFAAGKGHSQQLDNSNCIACHNSDWTAELHTGKT ADKKAVIAQLGMQATLVGQTDDTAVLTVSILDKDGNAIDAATVQDKIKRLETVTNVGPNFPIMGYNKSPGSGAAKIAKDL VKDGALQDGVTLVDGKLVFTTPALPFGTGDTDTAFTFIGLEMCSTGTSLTACTVDSATTSMKAELAFGTKSGNAPSMRHV NSVNFSTCQGCHSDTFEIHKGHHSGFVMTEQVSHAKDANGKAIVGVDGCVACHTPDGTYASGANKGAFEMKLHVIHGEQG VIKECTQCHNDFNLDAFKVKGALATSAGKYTTPITATCTSCHAPESIGHGLENMGAIVNGDYVQANQAAQSETCFYCHKP TPTDHTQVKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68066; Mature: 68066
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNAQTTKIALLLAASAVTMALAGCGGSDGNDGNPGEPGGEPAPAIQTLNFTFDKSVITN CCCCCHHEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHC GVPSVEFTVTNENDLPVVGLQKMRFAAAQLIPQGATGAGNASQWQYFGDETCDVAATCPG CCCCEEEEEECCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEECCCC TFVDQKNGHYSYTFNMNLTANAKITYNDQLAQRVLIRAYNTPLPDGTQVPNSNAFVDFTA CEEECCCCCEEEEEEEEEEECEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC DTGAAPTYSRKIVATESCNTCHQDLANVKHGGAYSDVNYCATCHTAGKVGVGKEFNVLVH CCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE AKHKDLTLGSLESCQSCHAANDAAPDWGNWSRIPTAATCGSCHSTVDFAAGKGHSQQLDN ECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCHHCCC SNCIACHNSDWTAELHTGKTADKKAVIAQLGMQATLVGQTDDTAVLTVSILDKDGNAIDA CCEEEEECCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCEEEH ATVQDKIKRLETVTNVGPNFPIMGYNKSPGSGAAKIAKDLVKDGALQDGVTLVDGKLVFT HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCEEEEE TPALPFGTGDTDTAFTFIGLEMCSTGTSLTACTVDSATTSMKAELAFGTKSGNAPSMRHV CCCCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCEEE NSVNFSTCQGCHSDTFEIHKGHHSGFVMTEQVSHAKDANGKAIVGVDGCVACHTPDGTYA CCCCCHHHCCCCCCCEEEECCCCCCEEEEHHHHHCCCCCCCEEEEECCEEEEECCCCCCC SGANKGAFEMKLHVIHGEQGVIKECTQCHNDFNLDAFKVKGALATSAGKYTTPITATCTS CCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCEEEEECC CHAPESIGHGLENMGAIVNGDYVQANQAAQSETCFYCHKPTPTDHTQVKM CCCCHHHHCCHHHCCCEECCCEEECCCCCCCCCEEEEECCCCCCCCEECC >Mature Secondary Structure MMNAQTTKIALLLAASAVTMALAGCGGSDGNDGNPGEPGGEPAPAIQTLNFTFDKSVITN CCCCCHHEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHC GVPSVEFTVTNENDLPVVGLQKMRFAAAQLIPQGATGAGNASQWQYFGDETCDVAATCPG CCCCEEEEEECCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEECCCC TFVDQKNGHYSYTFNMNLTANAKITYNDQLAQRVLIRAYNTPLPDGTQVPNSNAFVDFTA CEEECCCCCEEEEEEEEEEECEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC DTGAAPTYSRKIVATESCNTCHQDLANVKHGGAYSDVNYCATCHTAGKVGVGKEFNVLVH CCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE AKHKDLTLGSLESCQSCHAANDAAPDWGNWSRIPTAATCGSCHSTVDFAAGKGHSQQLDN ECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCHHCCC SNCIACHNSDWTAELHTGKTADKKAVIAQLGMQATLVGQTDDTAVLTVSILDKDGNAIDA CCEEEEECCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCEEEH ATVQDKIKRLETVTNVGPNFPIMGYNKSPGSGAAKIAKDLVKDGALQDGVTLVDGKLVFT HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCEEEEE TPALPFGTGDTDTAFTFIGLEMCSTGTSLTACTVDSATTSMKAELAFGTKSGNAPSMRHV CCCCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCEEE NSVNFSTCQGCHSDTFEIHKGHHSGFVMTEQVSHAKDANGKAIVGVDGCVACHTPDGTYA CCCCCHHHCCCCCCCEEEECCCCCCEEEEHHHHHCCCCCCCEEEEECCEEEEECCCCCCC SGANKGAFEMKLHVIHGEQGVIKECTQCHNDFNLDAFKVKGALATSAGKYTTPITATCTS CCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCEEEEECC CHAPESIGHGLENMGAIVNGDYVQANQAAQSETCFYCHKPTPTDHTQVKM CCCCHHHHCCHHHCCCEECCCEEECCCCCCCCCEEEEECCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA