Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is glxK [H]
Identifier: 160874721
GI number: 160874721
Start: 1933411
End: 1934619
Strand: Reverse
Name: glxK [H]
Synonym: Sbal195_1604
Alternate gene names: 160874721
Gene position: 1934619-1933411 (Counterclockwise)
Preceding gene: 160874722
Following gene: 160874720
Centisome position: 36.18
GC content: 53.1
Gene sequence:
>1209_bases ATGAAAATAGTTATCGCCCCCGACTCATTTAAAGAAAGCTTAAGCGCACTCGAAGTAGCTAACGCCATCGAGCAAGGCTT AAGACAAGTGATACCCGACTGCGACATAGTCAAAATTCCCGTTGCCGATGGCGGCGAAGGCACAGTGCAATCTATGGTCG ATGCCACGGGCGGCAGTATTGTCAGCCTAGAGGTCATGGGCCCACTGGGGCATAGGGTGCAAGCGCACTATGGCATTCTT GGTAATCTATCAAATAGTGACTCGAATAATGACTCGGATAGTCGCTCTAATGATGGCTCTGCAACGGTTCCAAATACTGG CGCGATTGCCGTGATTGAAATGGCCTCGGCCTCTGGTCTGCACCATGTGCCAAGGGAGCAACGTAACCCGCTGATGACCA CCAGTTACGGTACGGGCGAGCTGATTTGTGATGCGCTTAATCGGGGGATAAAACACATCATTTTAGGACTGGGCGGCAGT GCCACCAACGATGGCGGCGCGGGTATGGCCCAAGCGCTGGACATTTTATTGCTCGATAGCCAAGGTAAAACCTTGCCTTC TGGCGGCGCGGCGCTGGCAAATCTTGCCCGTATCGATATGACCAACGCCCATCCACTACTGAGCCAATGCAGCTTCGAAG TCGCCTGCGATGTTGATAATCCGCTGTGCGGCGAGCGTGGTGCATCAGCGATTTTTGGCCCGCAAAAAGGCGCAACGCCT GCGATGGTTAAGCAGCTCGATACGGCGCTCGCCTATTATGCCGATGTGATTGCCCGCAATGGCATGACAGATCACCGTGA ACATGCGGGTGCAGGTGCTGCGGGCGGTATGGGTCTTGGCGTGATGGCTTTTTTAAATGCCGAACTTAAACCCGGTGTTG AAATTGTAATGAAAACCGTTGGCCTTGCTGACAAAATCCGCGGCGCTGATTTAGTGATCACAGGTGAAGGCCGCATCGAC GGGCAAACCGTGTTTGGAAAAACCCCGATGGGTGTGTTAAAGCAAGCCCAACTGCAGGGCATTCCTACTATCGGTATCGC GGGCTGCTTAGGTGACAACGCCAATGCCATATTGGATCACGGTATGGCGGCTATCTTCCCTATCATTCCGCACTTAAGTC CACTCGATGATGTACTGGCTAATGCCAAGCTAAACCTTTGCAATACCGCCCGAAATATCGGCGCGGTACTCATGTTGGGC CAGCGCTAA
Upstream 100 bases:
>100_bases AGTGTTTGCACAGGAAAACTGTTGTACCCAACGTAAGTGGCATTGGGTTTAGTGTTCAACATTGAGCCCTGTTTTATCCC ATTTAGCTGTAGGATTTTTA
Downstream 100 bases:
>100_bases TACTCAAACAAATACTTAAGTAATTCGCTAGGTTTGATGATTTAATTAAAGGCGCCACTACGGCGCCTTTGCTTATTTAG GCCGCAACGCTTTGGTAACA
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKIVIAPDSFKESLSALEVANAIEQGLRQVIPDCDIVKIPVADGGEGTVQSMVDATGGSIVSLEVMGPLGHRVQAHYGIL GNLSNSDSNNDSDSRSNDGSATVPNTGAIAVIEMASASGLHHVPREQRNPLMTTSYGTGELICDALNRGIKHIILGLGGS ATNDGGAGMAQALDILLLDSQGKTLPSGGAALANLARIDMTNAHPLLSQCSFEVACDVDNPLCGERGASAIFGPQKGATP AMVKQLDTALAYYADVIARNGMTDHREHAGAGAAGGMGLGVMAFLNAELKPGVEIVMKTVGLADKIRGADLVITGEGRID GQTVFGKTPMGVLKQAQLQGIPTIGIAGCLGDNANAILDHGMAAIFPIIPHLSPLDDVLANAKLNLCNTARNIGAVLMLG QR
Sequences:
>Translated_402_residues MKIVIAPDSFKESLSALEVANAIEQGLRQVIPDCDIVKIPVADGGEGTVQSMVDATGGSIVSLEVMGPLGHRVQAHYGIL GNLSNSDSNNDSDSRSNDGSATVPNTGAIAVIEMASASGLHHVPREQRNPLMTTSYGTGELICDALNRGIKHIILGLGGS ATNDGGAGMAQALDILLLDSQGKTLPSGGAALANLARIDMTNAHPLLSQCSFEVACDVDNPLCGERGASAIFGPQKGATP AMVKQLDTALAYYADVIARNGMTDHREHAGAGAAGGMGLGVMAFLNAELKPGVEIVMKTVGLADKIRGADLVITGEGRID GQTVFGKTPMGVLKQAQLQGIPTIGIAGCLGDNANAILDHGMAAIFPIIPHLSPLDDVLANAKLNLCNTARNIGAVLMLG QR >Mature_402_residues MKIVIAPDSFKESLSALEVANAIEQGLRQVIPDCDIVKIPVADGGEGTVQSMVDATGGSIVSLEVMGPLGHRVQAHYGIL GNLSNSDSNNDSDSRSNDGSATVPNTGAIAVIEMASASGLHHVPREQRNPLMTTSYGTGELICDALNRGIKHIILGLGGS ATNDGGAGMAQALDILLLDSQGKTLPSGGAALANLARIDMTNAHPLLSQCSFEVACDVDNPLCGERGASAIFGPQKGATP AMVKQLDTALAYYADVIARNGMTDHREHAGAGAAGGMGLGVMAFLNAELKPGVEIVMKTVGLADKIRGADLVITGEGRID GQTVFGKTPMGVLKQAQLQGIPTIGIAGCLGDNANAILDHGMAAIFPIIPHLSPLDDVLANAKLNLCNTARNIGAVLMLG QR
Specific function: Glyoxylate catabolism. [C]
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI1786724, Length=401, Percent_Identity=52.3690773067332, Blast_Score=376, Evalue=1e-105, Organism=Escherichia coli, GI145693185, Length=402, Percent_Identity=50.2487562189055, Blast_Score=347, Evalue=5e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 41263; Mature: 41263
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVIAPDSFKESLSALEVANAIEQGLRQVIPDCDIVKIPVADGGEGTVQSMVDATGGSI CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCE VSLEVMGPLGHRVQAHYGILGNLSNSDSNNDSDSRSNDGSATVPNTGAIAVIEMASASGL EEEEEECCCCCHHEEHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC HHVPREQRNPLMTTSYGTGELICDALNRGIKHIILGLGGSATNDGGAGMAQALDILLLDS CCCCHHHCCCEEEECCCCHHHHHHHHHCCHHEEEEECCCCCCCCCCCCHHHHEEEEEECC QGKTLPSGGAALANLARIDMTNAHPLLSQCSFEVACDVDNPLCGERGASAIFGPQKGATP CCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH AMVKQLDTALAYYADVIARNGMTDHREHAGAGAAGGMGLGVMAFLNAELKPGVEIVMKTV HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH GLADKIRGADLVITGEGRIDGQTVFGKTPMGVLKQAQLQGIPTIGIAGCLGDNANAILDH CHHHHCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHC GMAAIFPIIPHLSPLDDVLANAKLNLCNTARNIGAVLMLGQR CHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCEEEEECCC >Mature Secondary Structure MKIVIAPDSFKESLSALEVANAIEQGLRQVIPDCDIVKIPVADGGEGTVQSMVDATGGSI CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCE VSLEVMGPLGHRVQAHYGILGNLSNSDSNNDSDSRSNDGSATVPNTGAIAVIEMASASGL EEEEEECCCCCHHEEHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC HHVPREQRNPLMTTSYGTGELICDALNRGIKHIILGLGGSATNDGGAGMAQALDILLLDS CCCCHHHCCCEEEECCCCHHHHHHHHHCCHHEEEEECCCCCCCCCCCCHHHHEEEEEECC QGKTLPSGGAALANLARIDMTNAHPLLSQCSFEVACDVDNPLCGERGASAIFGPQKGATP CCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH AMVKQLDTALAYYADVIARNGMTDHREHAGAGAAGGMGLGVMAFLNAELKPGVEIVMKTV HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH GLADKIRGADLVITGEGRIDGQTVFGKTPMGVLKQAQLQGIPTIGIAGCLGDNANAILDH CHHHHCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHC GMAAIFPIIPHLSPLDDVLANAKLNLCNTARNIGAVLMLGQR CHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]