Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874687
Identifier: 160874687
GI number: 160874687
Start: 1891928
End: 1893022
Strand: Direct
Name: 160874687
Synonym: Sbal195_1570
Alternate gene names: NA
Gene position: 1891928-1893022 (Clockwise)
Preceding gene: 160874686
Following gene: 160874692
Centisome position: 35.38
GC content: 44.84
Gene sequence:
>1095_bases ATGGATAAGTTGATGAGCCCATTATTGTATTCTTTAAAGCAAGGTTTCGAAGCCCTTAAAAGTATTCGAAATCATATTTC TGAAGCGAATTTACCCGCTGATTTCCCCCGCGCTGAATTACCGCCACTGTCCGAGGACGCTAAAGCCGAGCTATTGCAGC TATTAGCGCCGTTAGAAGCCTATCGAATTGAAAAGCTTGAAACTAAACTCTCCCGTAAAAAATGGGCGAAGCGTCTAGGT TGGCTAGTGTGCCTGCCCGCACTGGCCTTTGATTTAATCTCGTTAGCCTCTAACCATGACCCAACCATTTTGAGCCTGAT CGTCATCGCCGGTATTTTGGTGTGGGTTCAGATGCCTGAAATACAATATAAGCGCCATTATAAATATAAAATATTGCCTG TTTTACTCAAAAAACTAGGGGACTACCGTTATAGCCCCGACTCCTGTGTCAACCTTGATTCAGTGGCTGATTTCGAACTT ATGCCCCGTTTTAGCAAGCAACAATCAGAGGATCATATTCGCGGCAAGGTAGAGGATATCAGCTTCGAATTTTGCGAATT AACCTTAAAATCCCGTGGCAGCAAGTCAGACAAGATCCAATTTAAGGGCGGGGTCGTGATCATGACGATGCCCTTTAGCT TTGAATCCCATACCGTCGTCAGCCAAGATTATGGCTCCCTTGGTAATACTATGGCAGGCATAAAGAAACCCAGAGTGAAA CTCGAAAGCGTGACCTTTGAGGCGATGTTTGAAGTGTATTCCCACGACCAACATTATGCGCGATATCTATTGTCTCCCGC TGTAATGGAGCGCCTCGTCGAACTCGAACAGTTATTCCGTAAAACGGCGCGCGGGTCGGGGCTGAGTATCGAATTTAAAG CCAATAAAGTGCTGATTATGGCGAGCTATTTTGGCAATTTATTTGATACCGTCGATATCAATTTACCCACCCATGATATG TCGAAAATTCCGCAGTTACAGCAGGAGTTAGTCTTGATTACTGGCATCATCAAACAGCTAAAATTGGATTATCTTGCAGC GCAAAATCTGGCGACACAGCAGACACTTGAGAGGATTAAGACGCTAGCGGGTTAA
Upstream 100 bases:
>100_bases TCACAGCATGTTAACCTCAGAATTTAACCGCCACCCTATTTGTTACCGCTAAGGTTTGGGGTTCGCAGCGCAACGGAATG GGCGCTGTGTCGGCGATAAC
Downstream 100 bases:
>100_bases CTTGAGCAGTTCTTTTCTCTGTATTTTGAACTGTACTTTGAGCAGGTTTTTATTCGTCGAGAGAAGAGGTTGCTCAGATC TTGAAGGCTTAGCGTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MDKLMSPLLYSLKQGFEALKSIRNHISEANLPADFPRAELPPLSEDAKAELLQLLAPLEAYRIEKLETKLSRKKWAKRLG WLVCLPALAFDLISLASNHDPTILSLIVIAGILVWVQMPEIQYKRHYKYKILPVLLKKLGDYRYSPDSCVNLDSVADFEL MPRFSKQQSEDHIRGKVEDISFEFCELTLKSRGSKSDKIQFKGGVVIMTMPFSFESHTVVSQDYGSLGNTMAGIKKPRVK LESVTFEAMFEVYSHDQHYARYLLSPAVMERLVELEQLFRKTARGSGLSIEFKANKVLIMASYFGNLFDTVDINLPTHDM SKIPQLQQELVLITGIIKQLKLDYLAAQNLATQQTLERIKTLAG
Sequences:
>Translated_364_residues MDKLMSPLLYSLKQGFEALKSIRNHISEANLPADFPRAELPPLSEDAKAELLQLLAPLEAYRIEKLETKLSRKKWAKRLG WLVCLPALAFDLISLASNHDPTILSLIVIAGILVWVQMPEIQYKRHYKYKILPVLLKKLGDYRYSPDSCVNLDSVADFEL MPRFSKQQSEDHIRGKVEDISFEFCELTLKSRGSKSDKIQFKGGVVIMTMPFSFESHTVVSQDYGSLGNTMAGIKKPRVK LESVTFEAMFEVYSHDQHYARYLLSPAVMERLVELEQLFRKTARGSGLSIEFKANKVLIMASYFGNLFDTVDINLPTHDM SKIPQLQQELVLITGIIKQLKLDYLAAQNLATQQTLERIKTLAG >Mature_364_residues MDKLMSPLLYSLKQGFEALKSIRNHISEANLPADFPRAELPPLSEDAKAELLQLLAPLEAYRIEKLETKLSRKKWAKRLG WLVCLPALAFDLISLASNHDPTILSLIVIAGILVWVQMPEIQYKRHYKYKILPVLLKKLGDYRYSPDSCVNLDSVADFEL MPRFSKQQSEDHIRGKVEDISFEFCELTLKSRGSKSDKIQFKGGVVIMTMPFSFESHTVVSQDYGSLGNTMAGIKKPRVK LESVTFEAMFEVYSHDQHYARYLLSPAVMERLVELEQLFRKTARGSGLSIEFKANKVLIMASYFGNLFDTVDINLPTHDM SKIPQLQQELVLITGIIKQLKLDYLAAQNLATQQTLERIKTLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41374; Mature: 41374
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLMSPLLYSLKQGFEALKSIRNHISEANLPADFPRAELPPLSEDAKAELLQLLAPLEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YRIEKLETKLSRKKWAKRLGWLVCLPALAFDLISLASNHDPTILSLIVIAGILVWVQMPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC IQYKRHYKYKILPVLLKKLGDYRYSPDSCVNLDSVADFELMPRFSKQQSEDHIRGKVEDI HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCHHHHCCCHHHH SFEFCELTLKSRGSKSDKIQFKGGVVIMTMPFSFESHTVVSQDYGSLGNTMAGIKKPRVK HHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCEEEHHHHHHHCHHHHHCCCCCHH LESVTFEAMFEVYSHDQHYARYLLSPAVMERLVELEQLFRKTARGSGLSIEFKANKVLIM HHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEE ASYFGNLFDTVDINLPTHDMSKIPQLQQELVLITGIIKQLKLDYLAAQNLATQQTLERIK HHHHCCHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLAG HHCC >Mature Secondary Structure MDKLMSPLLYSLKQGFEALKSIRNHISEANLPADFPRAELPPLSEDAKAELLQLLAPLEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YRIEKLETKLSRKKWAKRLGWLVCLPALAFDLISLASNHDPTILSLIVIAGILVWVQMPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC IQYKRHYKYKILPVLLKKLGDYRYSPDSCVNLDSVADFELMPRFSKQQSEDHIRGKVEDI HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCHHHHCCCHHHH SFEFCELTLKSRGSKSDKIQFKGGVVIMTMPFSFESHTVVSQDYGSLGNTMAGIKKPRVK HHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCEEEHHHHHHHCHHHHHCCCCCHH LESVTFEAMFEVYSHDQHYARYLLSPAVMERLVELEQLFRKTARGSGLSIEFKANKVLIM HHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEE ASYFGNLFDTVDINLPTHDMSKIPQLQQELVLITGIIKQLKLDYLAAQNLATQQTLERIK HHHHCCHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLAG HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA