Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is phoU [H]
Identifier: 160874686
GI number: 160874686
Start: 1890717
End: 1891427
Strand: Direct
Name: phoU [H]
Synonym: Sbal195_1569
Alternate gene names: 160874686
Gene position: 1890717-1891427 (Clockwise)
Preceding gene: 160874685
Following gene: 160874687
Centisome position: 35.36
GC content: 48.8
Gene sequence:
>711_bases ATGGAAAACATGAATTTAAGTAAGCACATCTCAGGACAGTTTACCGCTGAGCTGGATGATATCCGTAACCGCGTACTCGC TATGGGTGGCTTGGTTGAACGTCAGCTTGAGCAAGCCATTGACGCGCTCAGCGCACTGGATGCGGAACTCGCGCAGCGTG TTATCGAGGGCGATCACAAGGTTAATGGCATGGAAGTGTCTATCGACGAAGAGTGCACCCGTATTATCGCCAAGCGTCAA CCTGCGGCCAGCGATTTACGGCTGATTATCGCCATCTCAAAAACCATCGCCGATCTTGAGCGTATTGGTGATGCCTGTGT GCGTATCGCTAAAGCAGCGTTAGATAAGCGTTTGAATAATCAACAACCTTTACTGGTTAGCATTGAAAATATGGGCCGTC ACGCGACCCGTATGTTGCACGCGACCTTAGATGCTTTGGCCCGTATGGATGCCGATACTGCGTTAGAGCTACATAAAGAA GATGCTAAGCTTGACCGTGAATACGAAGGCATTATCCGCCAGTTAATGACCTATATGATGGAAGATCCGCGTTCTATCCC AGACGTCTTAGACGTACTGTGGGCGGCGCGTGCGGTTGAGCGTGTTGGCGACCGTTGTAAAAATATCTGTGAATACATCA TCTACTACGTGAAAGGCAAAGACGTTCGCCATACTTCCTACGAAGATATGGAAAAGGACATGAAAGGCTAA
Upstream 100 bases:
>100_bases CACAGGACGTTACGGTTAATCAGCTCGGTCGCTATCGGATAAAGCCGCAACCGCAGGCTTTGAGCATGCTTGGTAAACAG TTAAGTAAAAGGTTGGCTAA
Downstream 100 bases:
>100_bases CACACGCATTAATCTGCGGTTGTAATGCCATTCGCTGAATACAACGCTCCGCAGTTTCTGTGGAGCGTTTTGCTTTTAGG ATGCTGAGCTAGGATCGTTG
Product: transcriptional regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MENMNLSKHISGQFTAELDDIRNRVLAMGGLVERQLEQAIDALSALDAELAQRVIEGDHKVNGMEVSIDEECTRIIAKRQ PAASDLRLIIAISKTIADLERIGDACVRIAKAALDKRLNNQQPLLVSIENMGRHATRMLHATLDALARMDADTALELHKE DAKLDREYEGIIRQLMTYMMEDPRSIPDVLDVLWAARAVERVGDRCKNICEYIIYYVKGKDVRHTSYEDMEKDMKG
Sequences:
>Translated_236_residues MENMNLSKHISGQFTAELDDIRNRVLAMGGLVERQLEQAIDALSALDAELAQRVIEGDHKVNGMEVSIDEECTRIIAKRQ PAASDLRLIIAISKTIADLERIGDACVRIAKAALDKRLNNQQPLLVSIENMGRHATRMLHATLDALARMDADTALELHKE DAKLDREYEGIIRQLMTYMMEDPRSIPDVLDVLWAARAVERVGDRCKNICEYIIYYVKGKDVRHTSYEDMEKDMKG >Mature_236_residues MENMNLSKHISGQFTAELDDIRNRVLAMGGLVERQLEQAIDALSALDAELAQRVIEGDHKVNGMEVSIDEECTRIIAKRQ PAASDLRLIIAISKTIADLERIGDACVRIAKAALDKRLNNQQPLLVSIENMGRHATRMLHATLDALARMDADTALELHKE DAKLDREYEGIIRQLMTYMMEDPRSIPDVLDVLWAARAVERVGDRCKNICEYIIYYVKGKDVRHTSYEDMEKDMKG
Specific function: Probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=236, Percent_Identity=61.0169491525424, Blast_Score=311, Evalue=2e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26707; Mature: 26707
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENMNLSKHISGQFTAELDDIRNRVLAMGGLVERQLEQAIDALSALDAELAQRVIEGDHK CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VNGMEVSIDEECTRIIAKRQPAASDLRLIIAISKTIADLERIGDACVRIAKAALDKRLNN CCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QQPLLVSIENMGRHATRMLHATLDALARMDADTALELHKEDAKLDREYEGIIRQLMTYMM CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDPRSIPDVLDVLWAARAVERVGDRCKNICEYIIYYVKGKDVRHTSYEDMEKDMKG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MENMNLSKHISGQFTAELDDIRNRVLAMGGLVERQLEQAIDALSALDAELAQRVIEGDHK CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VNGMEVSIDEECTRIIAKRQPAASDLRLIIAISKTIADLERIGDACVRIAKAALDKRLNN CCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QQPLLVSIENMGRHATRMLHATLDALARMDADTALELHKEDAKLDREYEGIIRQLMTYMM CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDPRSIPDVLDVLWAARAVERVGDRCKNICEYIIYYVKGKDVRHTSYEDMEKDMKG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2993631; 3881386; 7686882; 9278503; 3034860; 3536855; 8226621 [H]