Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is yqgH [H]
Identifier: 160874683
GI number: 160874683
Start: 1885807
End: 1888065
Strand: Direct
Name: yqgH [H]
Synonym: Sbal195_1566
Alternate gene names: 160874683
Gene position: 1885807-1888065 (Clockwise)
Preceding gene: 160874681
Following gene: 160874684
Centisome position: 35.27
GC content: 49.71
Gene sequence:
>2259_bases ATGGAAAGTCAGGTCACTCAACCTGGTCCTGCATCGCACAGTATGCTTAAAGGCGGACGCTCGAATCGCAGGGCATTTAA GGATAAAGCGGCGCAAATCGGCGTCACTATCGGCGGCACTATGGTGTTTGTCGCCTTATTGTTGATCTTCTTTTATCTGT TGTATGTGATTAAACCCATTTTCGATAGTGCTGATGTCACGCCGGTTAAAACGGTGAGCTATCAACACGCGGATGTACCT ACTTTAATGGTGGGCGCTGAAGAGCAAAATGAGGTGATGTACCGTGTGGCCGTTGATGGTCAAGTGGACTTCTATACCGT TGCCGACGGTAGCCTACTTTCTAGCTTTACACCGCCATTGCCAGCGGGCGTGACTGTGACCAGTGCCGCCGTTGCCGTGC CGAGCGAACAGCGTTTTGCGCTGGGATTAAGTAATGGTCAGGTGCTAGTGGCTGGCCTAGAGTTTGGTTTAAGTTATCCA AACAACAAGCGCTTAATCACGCCTAAACTGCGTTATCCCGCAGGCGAGACCCCGATTACAGTCGATGAAACGGGCAGTGC GATTCATAAACTGACCTTCACCTACAGTTCAGACAAAATGAGCTTTGCCTATCAAGATGAGAGCGGCGTTTGGCGCCTGA CTCGCCTCGAAGGGCAAGAGAACATGATGACTGAAGAAGTGGAGTGGGTGTCTACGACGTCACAAATTCAAGATGCTCCG AAGAAAGTCTCCCATGAGCTGATGACGCCCGATCAACGTCAATTGATGTTGCAAACTGGCAATAAAATCTTCGTGTACGA CATCCGTGATACTGACAGCTTAGATCTGCTGCAGGTGATTGATGTTGAACGTGCTAAAGCCCAAGTGAATAACGTGGCTT TGCTGGCGGGCGCGAGTTCGTTGCTGGTCAGCTACGACACAGGTATTGTGGCCCAGTACTTCCAAGTCAGTGGTCCAAAA GGGCGTTTATATCAAGAAATCCGCCAGTTTGATGACTTACCGCCTATTGAGTCCATTACCTCTGAATTCTACCGTAAGAG TTTTGCGACTGTGAGCCCTGAGGGCGAACTGACATTGCTCTATACCACGAGTCATCGTGAACTGTTTGACGAAAAATTCG ACCTTAAAAACCCCGGTAAAATGGGCTTTACCCCACGCTCAAACGGCATAGTCGTTGAAGCGGACAAAAAGCTGCATATC TTCAGTGTGGAAAACTCCCACCCAGAAGTGTCATGGAGCGCCATGTGGGACAAGGTGTGGTATGAAGGTTATCCTGAGCC TAAATACGTATGGCAATCGACTTCGGGGTCTGATGATTTCGAAGCTAAGCTGAGCTTAATGCCATTGGCCTACGGCACAA TGAAAGCGGCATTTTATGCCATGTTATTTGCCGTGCCTTTAGCCATTGCCGGTGCGATTTACACCGCTTACTTTATGTCG CCTAAGGTGCGCGGTTTAGTGAAACCGACCATCGAAATCATGGAAGCCTTACCGACGGTTATTTTAGGTTTCTTGGCGGG TCTGTGGTTAGCGCCGTTGATTGAAGAACATCTCCCCGGCATTTTGATTTTACTGACCCTGTTGCCGATCTCGATTCTCG CTTCGGCCTATGGCTGGAGTAAGTTACCTGCTATTTGGAAACAACGTTTACCCGAAGTGTACCAAGAGCTGATGTTGATC CCTGTGGTTTGTTTCGTGGGTTGGTTCTCTTTTGCGGTCAGCCCAATCATCGAAGTGGCACTGTTTGATGGTAATACCCG TCAATTTATCACCAACGAACTGGGTATCACCTTCGACCAACGTAACGCGCTGGTAGTAGGTATCGCCATGGGCTTTGCGG TTATTCCTACGATTTTCTCTATCGCGGAAGATGCGATTTTCTCTGTGCCACGTCATTTATCGAACGGCAGCTTAGCCTTA GGTGCGACGCCTTGGCAGACACTGACCCGCGTGGTGTTGTTAACCGCAAGTCCGGGTATTTTCTCGGCCATCATGATGGG CCTAGGCCGCGCTGTGGGCGAGACCATGATCGTACTGATGGCCACCGGTAACACCGCCATTATGGAATGGAGCGTGTTCG AAGGGATGCGAACCTTGGCAGCAAACATTGCGGTTGAAATGCCTGAGTCGGCTATCGGTAGTTCGCATTACCGTGTGCTC TTCCTCGCGGCGTTCGTGCTATTCATCTTTACATTCTTCTTTAACACCATTGCAGAAGTGGTGAGACAGCGTCTACGTGA ACGCTATAGCTCGCTGTAA
Upstream 100 bases:
>100_bases GGATGTTGTTATTGCTCAGTTTACGTTCAAACAGTGTAAGCATAGCACTCGGCAAATCCTAGCGAAAAAACTCGCTGGCT ATTAATAATAGAGGTTCTTA
Downstream 100 bases:
>100_bases CGGGGATAAGACAATGACATTAAATACTATTTCGCCAGTGACCTTGAGAGGTTTGTGCAATGGGTAAGTGGGTAAAATCA GGCTCGCCATGGATATGGAT
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 752; Mature: 752
Protein sequence:
>752_residues MESQVTQPGPASHSMLKGGRSNRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPIFDSADVTPVKTVSYQHADVP TLMVGAEEQNEVMYRVAVDGQVDFYTVADGSLLSSFTPPLPAGVTVTSAAVAVPSEQRFALGLSNGQVLVAGLEFGLSYP NNKRLITPKLRYPAGETPITVDETGSAIHKLTFTYSSDKMSFAYQDESGVWRLTRLEGQENMMTEEVEWVSTTSQIQDAP KKVSHELMTPDQRQLMLQTGNKIFVYDIRDTDSLDLLQVIDVERAKAQVNNVALLAGASSLLVSYDTGIVAQYFQVSGPK GRLYQEIRQFDDLPPIESITSEFYRKSFATVSPEGELTLLYTTSHRELFDEKFDLKNPGKMGFTPRSNGIVVEADKKLHI FSVENSHPEVSWSAMWDKVWYEGYPEPKYVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS PKVRGLVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILILLTLLPISILASAYGWSKLPAIWKQRLPEVYQELMLI PVVCFVGWFSFAVSPIIEVALFDGNTRQFITNELGITFDQRNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLAL GATPWQTLTRVVLLTASPGIFSAIMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL FLAAFVLFIFTFFFNTIAEVVRQRLRERYSSL
Sequences:
>Translated_752_residues MESQVTQPGPASHSMLKGGRSNRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPIFDSADVTPVKTVSYQHADVP TLMVGAEEQNEVMYRVAVDGQVDFYTVADGSLLSSFTPPLPAGVTVTSAAVAVPSEQRFALGLSNGQVLVAGLEFGLSYP NNKRLITPKLRYPAGETPITVDETGSAIHKLTFTYSSDKMSFAYQDESGVWRLTRLEGQENMMTEEVEWVSTTSQIQDAP KKVSHELMTPDQRQLMLQTGNKIFVYDIRDTDSLDLLQVIDVERAKAQVNNVALLAGASSLLVSYDTGIVAQYFQVSGPK GRLYQEIRQFDDLPPIESITSEFYRKSFATVSPEGELTLLYTTSHRELFDEKFDLKNPGKMGFTPRSNGIVVEADKKLHI FSVENSHPEVSWSAMWDKVWYEGYPEPKYVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS PKVRGLVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILILLTLLPISILASAYGWSKLPAIWKQRLPEVYQELMLI PVVCFVGWFSFAVSPIIEVALFDGNTRQFITNELGITFDQRNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLAL GATPWQTLTRVVLLTASPGIFSAIMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL FLAAFVLFIFTFFFNTIAEVVRQRLRERYSSL >Mature_752_residues MESQVTQPGPASHSMLKGGRSNRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPIFDSADVTPVKTVSYQHADVP TLMVGAEEQNEVMYRVAVDGQVDFYTVADGSLLSSFTPPLPAGVTVTSAAVAVPSEQRFALGLSNGQVLVAGLEFGLSYP NNKRLITPKLRYPAGETPITVDETGSAIHKLTFTYSSDKMSFAYQDESGVWRLTRLEGQENMMTEEVEWVSTTSQIQDAP KKVSHELMTPDQRQLMLQTGNKIFVYDIRDTDSLDLLQVIDVERAKAQVNNVALLAGASSLLVSYDTGIVAQYFQVSGPK GRLYQEIRQFDDLPPIESITSEFYRKSFATVSPEGELTLLYTTSHRELFDEKFDLKNPGKMGFTPRSNGIVVEADKKLHI FSVENSHPEVSWSAMWDKVWYEGYPEPKYVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS PKVRGLVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILILLTLLPISILASAYGWSKLPAIWKQRLPEVYQELMLI PVVCFVGWFSFAVSPIIEVALFDGNTRQFITNELGITFDQRNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLAL GATPWQTLTRVVLLTASPGIFSAIMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL FLAAFVLFIFTFFFNTIAEVVRQRLRERYSSL
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4590
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=246, Percent_Identity=25.2032520325203, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 83108; Mature: 83108
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESQVTQPGPASHSMLKGGRSNRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPI CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHH FDSADVTPVKTVSYQHADVPTLMVGAEEQNEVMYRVAVDGQVDFYTVADGSLLSSFTPPL CCCCCCCEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEECCCHHHHCCCCCC PAGVTVTSAAVAVPSEQRFALGLSNGQVLVAGLEFGLSYPNNKRLITPKLRYPAGETPIT CCCCEEEHHEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECEECCCCCCCCEE VDETGSAIHKLTFTYSSDKMSFAYQDESGVWRLTRLEGQENMMTEEVEWVSTTSQIQDAP ECCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH KKVSHELMTPDQRQLMLQTGNKIFVYDIRDTDSLDLLQVIDVERAKAQVNNVALLAGASS HHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCC LLVSYDTGIVAQYFQVSGPKGRLYQEIRQFDDLPPIESITSEFYRKSFATVSPEGELTLL EEEEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE YTTSHRELFDEKFDLKNPGKMGFTPRSNGIVVEADKKLHIFSVENSHPEVSWSAMWDKVW EECCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEHHHHHHHHH YEGYPEPKYVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS HCCCCCCCEEEECCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKVRGLVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILILLTLLPISILASAYGWS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH KLPAIWKQRLPEVYQELMLIPVVCFVGWFSFAVSPIIEVALFDGNTRQFITNELGITFDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCEECC RNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLALGATPWQTLTRVVLLTASPGI CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHEEEEECCCHH FSAIMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL HHHHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHEECCHHHCCCCCHHHH FLAAFVLFIFTFFFNTIAEVVRQRLRERYSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESQVTQPGPASHSMLKGGRSNRRAFKDKAAQIGVTIGGTMVFVALLLIFFYLLYVIKPI CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHH FDSADVTPVKTVSYQHADVPTLMVGAEEQNEVMYRVAVDGQVDFYTVADGSLLSSFTPPL CCCCCCCEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEECCCHHHHCCCCCC PAGVTVTSAAVAVPSEQRFALGLSNGQVLVAGLEFGLSYPNNKRLITPKLRYPAGETPIT CCCCEEEHHEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECEECCCCCCCCEE VDETGSAIHKLTFTYSSDKMSFAYQDESGVWRLTRLEGQENMMTEEVEWVSTTSQIQDAP ECCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH KKVSHELMTPDQRQLMLQTGNKIFVYDIRDTDSLDLLQVIDVERAKAQVNNVALLAGASS HHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCC LLVSYDTGIVAQYFQVSGPKGRLYQEIRQFDDLPPIESITSEFYRKSFATVSPEGELTLL EEEEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE YTTSHRELFDEKFDLKNPGKMGFTPRSNGIVVEADKKLHIFSVENSHPEVSWSAMWDKVW EECCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEHHHHHHHHH YEGYPEPKYVWQSTSGSDDFEAKLSLMPLAYGTMKAAFYAMLFAVPLAIAGAIYTAYFMS HCCCCCCCEEEECCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKVRGLVKPTIEIMEALPTVILGFLAGLWLAPLIEEHLPGILILLTLLPISILASAYGWS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH KLPAIWKQRLPEVYQELMLIPVVCFVGWFSFAVSPIIEVALFDGNTRQFITNELGITFDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCEECC RNALVVGIAMGFAVIPTIFSIAEDAIFSVPRHLSNGSLALGATPWQTLTRVVLLTASPGI CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHEEEEECCCHH FSAIMMGLGRAVGETMIVLMATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVL HHHHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHEECCHHHCCCCCHHHH FLAAFVLFIFTFFFNTIAEVVRQRLRERYSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]