Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874681
Identifier: 160874681
GI number: 160874681
Start: 1884088
End: 1884975
Strand: Direct
Name: 160874681
Synonym: Sbal195_1564
Alternate gene names: NA
Gene position: 1884088-1884975 (Clockwise)
Preceding gene: 160874680
Following gene: 160874683
Centisome position: 35.23
GC content: 49.55
Gene sequence:
>888_bases TTGCCTGCCAACCTGTTATTACTGCTTGCCGCCGCGATTTGGGGCTTTGGATTTGTCGCCCAAACCTTAGGTATGGAACA TCTTTCCCCCTTTGCGTTTAATGGTATTCGCTTTTTAATGGGGACGTTTAGCTTAGTGCCTTTGGTGTGGTACTTGCGTC GGCAAAATAAGCTGCATGTGAGTGCGCCAAAGGATTTAGTGCGCGGCAGTTTGCTGGTCGGAGTTTTACTGTTTGCGGGC GCGTCATTTCAACAGGTCGGTTTGCAATACACCACAGCAGCGAACGCGGGCTTTATCACTGGCCTATATATAGTGTTAGT GCCTGTGCTTGGGTTAGCGCTAAAACATACAACAGGCTTGAATACTTGGCTTGGCTGCGCGATTGCCGCAGTCGGTTTGT ATTTTTTAAGCGTTAAAGATGGCATGAGTATAGGTTATGGCGATGCCTTGCAGTTGGTGGGCGCCTTTTTTTGGGCATTG CACATTCTGGCGGTGGATCATTTTGCCAAGCGGATTTCGCCCGTGGTGTTAGCCATGATGCAGTTTTTTGTCTGCGGCGT GCTGAGTTTGATGGTGTCGGCGGTAATTGAAGTCACCACGCTCGATGGCGTGACGGCGGCTTGGGGTTCACTTTTCTATG CTGGGCTGATTTCGGTGGGAATTGCTTATACCTTGCAAGTGTTGGCGCAGAAAAATGCGCATCCTGCCCATGCGGCGATT ATCCTCAGTTTAGAAACGGTATTTGCGGCCATTGGCGGCATTATTTTCCTCGATGAGAGTTTGAGTGTGCGGGCATTATT CGGCTGTGGCTTGATGTTGCTAGGGATGCTGATCTCCCAAGTGCCACTGCGTTACTTAGTCAAATCTCGGCATCAAAAAG TGACTTAA
Upstream 100 bases:
>100_bases CCGCTCCCAGAGAGGGTTTAACTACAAAGTTGCAACATGTTTGGACAAGTCTCACGCGGCTAGGTAATCTTGTGATCTTT TTGTTCGCTGAGAATTTATC
Downstream 100 bases:
>100_bases ACAAAAACGCCGCTGGCATCTGCTTAGCGGCGTTTGTATTTTATGCATTTTTTAAAAAGCGCTTTAAGTGCTGCCTGTAA ATGCAAGCTCTAAATGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MPANLLLLLAAAIWGFGFVAQTLGMEHLSPFAFNGIRFLMGTFSLVPLVWYLRRQNKLHVSAPKDLVRGSLLVGVLLFAG ASFQQVGLQYTTAANAGFITGLYIVLVPVLGLALKHTTGLNTWLGCAIAAVGLYFLSVKDGMSIGYGDALQLVGAFFWAL HILAVDHFAKRISPVVLAMMQFFVCGVLSLMVSAVIEVTTLDGVTAAWGSLFYAGLISVGIAYTLQVLAQKNAHPAHAAI ILSLETVFAAIGGIIFLDESLSVRALFGCGLMLLGMLISQVPLRYLVKSRHQKVT
Sequences:
>Translated_295_residues MPANLLLLLAAAIWGFGFVAQTLGMEHLSPFAFNGIRFLMGTFSLVPLVWYLRRQNKLHVSAPKDLVRGSLLVGVLLFAG ASFQQVGLQYTTAANAGFITGLYIVLVPVLGLALKHTTGLNTWLGCAIAAVGLYFLSVKDGMSIGYGDALQLVGAFFWAL HILAVDHFAKRISPVVLAMMQFFVCGVLSLMVSAVIEVTTLDGVTAAWGSLFYAGLISVGIAYTLQVLAQKNAHPAHAAI ILSLETVFAAIGGIIFLDESLSVRALFGCGLMLLGMLISQVPLRYLVKSRHQKVT >Mature_294_residues PANLLLLLAAAIWGFGFVAQTLGMEHLSPFAFNGIRFLMGTFSLVPLVWYLRRQNKLHVSAPKDLVRGSLLVGVLLFAGA SFQQVGLQYTTAANAGFITGLYIVLVPVLGLALKHTTGLNTWLGCAIAAVGLYFLSVKDGMSIGYGDALQLVGAFFWALH ILAVDHFAKRISPVVLAMMQFFVCGVLSLMVSAVIEVTTLDGVTAAWGSLFYAGLISVGIAYTLQVLAQKNAHPAHAAII LSLETVFAAIGGIIFLDESLSVRALFGCGLMLLGMLISQVPLRYLVKSRHQKVT
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31585; Mature: 31454
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANLLLLLAAAIWGFGFVAQTLGMEHLSPFAFNGIRFLMGTFSLVPLVWYLRRQNKLHV CCHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE SAPKDLVRGSLLVGVLLFAGASFQQVGLQYTTAANAGFITGLYIVLVPVLGLALKHTTGL CCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC NTWLGCAIAAVGLYFLSVKDGMSIGYGDALQLVGAFFWALHILAVDHFAKRISPVVLAMM HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFVCGVLSLMVSAVIEVTTLDGVTAAWGSLFYAGLISVGIAYTLQVLAQKNAHPAHAAI HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ILSLETVFAAIGGIIFLDESLSVRALFGCGLMLLGMLISQVPLRYLVKSRHQKVT HHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PANLLLLLAAAIWGFGFVAQTLGMEHLSPFAFNGIRFLMGTFSLVPLVWYLRRQNKLHV CHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE SAPKDLVRGSLLVGVLLFAGASFQQVGLQYTTAANAGFITGLYIVLVPVLGLALKHTTGL CCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC NTWLGCAIAAVGLYFLSVKDGMSIGYGDALQLVGAFFWALHILAVDHFAKRISPVVLAMM HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFVCGVLSLMVSAVIEVTTLDGVTAAWGSLFYAGLISVGIAYTLQVLAQKNAHPAHAAI HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ILSLETVFAAIGGIIFLDESLSVRALFGCGLMLLGMLISQVPLRYLVKSRHQKVT HHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]