Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874678
Identifier: 160874678
GI number: 160874678
Start: 1880761
End: 1881480
Strand: Direct
Name: 160874678
Synonym: Sbal195_1561
Alternate gene names: NA
Gene position: 1880761-1881480 (Clockwise)
Preceding gene: 160874673
Following gene: 160874680
Centisome position: 35.17
GC content: 48.33
Gene sequence:
>720_bases ATGATTAATTCGCTGCATAACACGTTACATCGAGAGCGAAGTGGAGAGCTTAATCGGGGCCTAAGTCGAAGGCAGGATCT AAGCCTAAGTCGAGGACTAAATCTAGATATTAGCCGAGTGCTCAATAGATATTTAGCAGTGTTAGTGCTGCTGTTCACGG GCGCTTTAGGTCTTACAGGGTGCGTGACAGTGACGGATAACGCGGCGCAGCCGCTGCGAACCACAGTCGTGATGTCTGGC GATCTCAGTGAATTACCACCAACCGCCATGACGTACACTTGGCATCCAAAGTTTCAAAAAATTATCACAGACAAGCGCTT AGAGCCGCAGCAAGTGTTGCAGCACATGCAAGATGTACTCAAACAAAGTTTGCAGAATAAAGGATATCGCTGGGTTGAAG ACCCACAACTGGCGGATTTTCAGGTCGGGTTTGGTGTCGCCATGGGCACTGAAATGAGCGATGAGCAAATTCTGGCGGTA ACAGGCTTGGTTGCTGGGCTTTCGACCGACGGTGTGAACACTAAAAAGTATGACAAAGGCACTGTGGTAATAGCACTGTT TAAGCCGACTAAAATAAAGGGCGGCGGTAACGAGCCCATTTGGCGTGTACTTGCCCAAGGCTTTGGCAACATTAAAAAGA TGGATGAGCTAACCGAAAACTTCGACAGTTTAATTGCCAGCATGGTGGCCAACATGCCATCGGTTAATGTGGCACCTTAG
Upstream 100 bases:
>100_bases ATTGGAGTATGCTGATTTAACACTATGATGCATATCAACTTTCAGTTTTAGCAATAGCGACTATCCTTAGACAGAATTTT ATAAAATGAGGGAACAGTGC
Downstream 100 bases:
>100_bases TCAGCGTTTTAGTCTTGCTTCGTTTCAGTACTAGCCGAATGAGTCAGCATCTTGATAGGAGCATTCGCCATATAAACGGG ATTAGTGCGTAATTGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MINSLHNTLHRERSGELNRGLSRRQDLSLSRGLNLDISRVLNRYLAVLVLLFTGALGLTGCVTVTDNAAQPLRTTVVMSG DLSELPPTAMTYTWHPKFQKIITDKRLEPQQVLQHMQDVLKQSLQNKGYRWVEDPQLADFQVGFGVAMGTEMSDEQILAV TGLVAGLSTDGVNTKKYDKGTVVIALFKPTKIKGGGNEPIWRVLAQGFGNIKKMDELTENFDSLIASMVANMPSVNVAP
Sequences:
>Translated_239_residues MINSLHNTLHRERSGELNRGLSRRQDLSLSRGLNLDISRVLNRYLAVLVLLFTGALGLTGCVTVTDNAAQPLRTTVVMSG DLSELPPTAMTYTWHPKFQKIITDKRLEPQQVLQHMQDVLKQSLQNKGYRWVEDPQLADFQVGFGVAMGTEMSDEQILAV TGLVAGLSTDGVNTKKYDKGTVVIALFKPTKIKGGGNEPIWRVLAQGFGNIKKMDELTENFDSLIASMVANMPSVNVAP >Mature_239_residues MINSLHNTLHRERSGELNRGLSRRQDLSLSRGLNLDISRVLNRYLAVLVLLFTGALGLTGCVTVTDNAAQPLRTTVVMSG DLSELPPTAMTYTWHPKFQKIITDKRLEPQQVLQHMQDVLKQSLQNKGYRWVEDPQLADFQVGFGVAMGTEMSDEQILAV TGLVAGLSTDGVNTKKYDKGTVVIALFKPTKIKGGGNEPIWRVLAQGFGNIKKMDELTENFDSLIASMVANMPSVNVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26324; Mature: 26324
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSLHNTLHRERSGELNRGLSRRQDLSLSRGLNLDISRVLNRYLAVLVLLFTGALGLTG CCCHHHHHHHHHHCCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCE CVTVTDNAAQPLRTTVVMSGDLSELPPTAMTYTWHPKFQKIITDKRLEPQQVLQHMQDVL EEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHH KQSLQNKGYRWVEDPQLADFQVGFGVAMGTEMSDEQILAVTGLVAGLSTDGVNTKKYDKG HHHHHHCCCEECCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEECCC TVVIALFKPTKIKGGGNEPIWRVLAQGFGNIKKMDELTENFDSLIASMVANMPSVNVAP EEEEEEECCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MINSLHNTLHRERSGELNRGLSRRQDLSLSRGLNLDISRVLNRYLAVLVLLFTGALGLTG CCCHHHHHHHHHHCCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCE CVTVTDNAAQPLRTTVVMSGDLSELPPTAMTYTWHPKFQKIITDKRLEPQQVLQHMQDVL EEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHH KQSLQNKGYRWVEDPQLADFQVGFGVAMGTEMSDEQILAVTGLVAGLSTDGVNTKKYDKG HHHHHHCCCEECCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEECCC TVVIALFKPTKIKGGGNEPIWRVLAQGFGNIKKMDELTENFDSLIASMVANMPSVNVAP EEEEEEECCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA