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The map label for this gene is insF1 [H]

Identifier: 160874673

GI number: 160874673

Start: 1876160

End: 1876969

Strand: Direct

Name: insF1 [H]

Synonym: Sbal195_1556

Alternate gene names: 160874673

Gene position: 1876160-1876969 (Clockwise)

Preceding gene: 160874672

Following gene: 160874678

Centisome position: 35.09

GC content: 45.43

Gene sequence:

>810_bases
ATGAGTGTCAGTAAGTCAGGCTATTACGATTGGCATAAACGCCCTGCAAACGTGATAAGCCTTGAAACACTGAAGCTTTA
TCGCCTTGTTCGACAGCTATTTAAGCAAAGTCGAGGCAGCTTAGGGAATCGTGAAATGGTGAAGAAATTGCGCAAGGAAG
GCTACCAGGTTGGTCGCTATCTCGTTCGTAAAATTATGCACCGCCTTCGACTCAAAGTAACCCAGCGATGTGCTTACAAG
GTGACGACACAGCGAAAACACTCAGATGCAGTGGCTGATAACCTGTTAAACATGAACTTTAATCCAGTATCGGCTAATCA
GGTCTGGGCGAGTGACGTGACCTATTTAAAGACGGGTGAAGGCTGGATGTACTTAGCTGTGGTGATGGATTTATATTCAC
GCCGGATTGTGGGATGGCACATAGACAAACGCATGACCACAGATTTGATATCCAAGGCATTAATAAAAGCCTACAACCTG
CGCCAACCGGCCAGAGGGTTGGTATTTCACAGTGACCGAGGCTCGCAATATACCAGTAAGCAATTCGGTAGGCTGCTATC
GAGCTATGGTATCCGAGCCAGCATGGGTGATGTGGGTGCGTGTTGGGATAATGCCGTTGTTGAGCGTTTCTTTGGTAGCT
TGAAACACGATTGGATTTTTAAAGTTAATCAACCAACAAGGGAGTTTATGAAGCAAGATGTGACGGCTTACATGAAATAT
TACAACTTGGAGCGGCTTCATTCTGCTAATGACGCTCTGTCACCTGTAGAGTTTGAAAATTCTCAACTAAAAGTGTCCAG
TTTGGGTTGA

Upstream 100 bases:

>100_bases
TAAAAAAGGCAAGCGCCTTCTTTGCGAGAGAAATGAAGTAAGATTTCGTTTCATCAAACTGCAATCTCACCTATTCCCCA
TAGCACTGTTATGTCGAGTA

Downstream 100 bases:

>100_bases
CCAGTACACTTGTAGTTATGCCAGTAATTAAATTATTCTTAATAAAAACTATATTCCAAGTCTTATTTTTTTTAATGTTT
TAGGTATTTCATCGTAAGAG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKVTQRCAYK
VTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNL
RQPARGLVFHSDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
YNLERLHSANDALSPVEFENSQLKVSSLG

Sequences:

>Translated_269_residues
MSVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKVTQRCAYK
VTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNL
RQPARGLVFHSDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
YNLERLHSANDALSPVEFENSQLKVSSLG
>Mature_268_residues
SVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKVTQRCAYKV
TTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNLR
QPARGLVFHSDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKYY
NLERLHSANDALSPVEFENSQLKVSSLG

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=211, Percent_Identity=36.4928909952607, Blast_Score=144, Evalue=6e-35,
Organism=Escherichia coli, GI1788405, Length=266, Percent_Identity=36.4661654135338, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1787263, Length=266, Percent_Identity=36.4661654135338, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1786753, Length=266, Percent_Identity=36.4661654135338, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1786570, Length=266, Percent_Identity=36.4661654135338, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1786490, Length=266, Percent_Identity=36.4661654135338, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1789981, Length=234, Percent_Identity=31.1965811965812, Blast_Score=131, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31240; Mature: 31109

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRY
CCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LVRKIMHRLRLKVTQRCAYKVTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEECCC
GWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNLRQPARGLVFHSDRGSQYTSK
CHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHH
QFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
YNLERLHSANDALSPVEFENSQLKVSSLG
HHHHHHHCCCCCCCCCEECCCEEEEECCC
>Mature Secondary Structure 
SVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRY
CCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LVRKIMHRLRLKVTQRCAYKVTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEECCC
GWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNLRQPARGLVFHSDRGSQYTSK
CHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHH
QFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
YNLERLHSANDALSPVEFENSQLKVSSLG
HHHHHHHCCCCCCCCCEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]