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The map label for this gene is blc [H]

Identifier: 160874654

GI number: 160874654

Start: 1852340

End: 1852864

Strand: Reverse

Name: blc [H]

Synonym: Sbal195_1537

Alternate gene names: 160874654

Gene position: 1852864-1852340 (Counterclockwise)

Preceding gene: 160874655

Following gene: 160874651

Centisome position: 34.65

GC content: 42.29

Gene sequence:

>525_bases
TTGAGAAAGCTACTGTTGGTCATCAGTGTATTTTTGCTCAGCGGTTGTTTAGGCATGCCTAAATTGGTTCAACCCGTTAA
TGATTTTGAGCTGAATAAATACTTAGGTAAATGGTACGAAATTGCGCGCTTAGATCATTCATTTGAAAGGGGGTTAAGCC
AAGTTAGCGCAGAATACAGCCTGAAAGACGATGGCGGTGTGATGGTTATTAACAGTGGATTTTCAGCGGCTAAAAACGAA
TGGAAAGAAGCCGAAGGTAAGGCCTATTTTGTCAATGGGGATTCAGAAGGCTATTTGAAAGTCTCCTTCTTTGGGCCATT
TTATGGATCGTATGTGGTCTTCGAATTAGACCATGAAAACTATCAATACGCTTTTATATCAGGACCCGACACGGATTATT
TGTGGCTACTGGCTAAAACCCCGACTGTGCCACCCGAGGTACTGCAAAAGTTTGTTGAAATGTCTAAAGCCCGCGGTTTT
GATACCGACAGTTTGATTTATGTGCAGCAAGAGTCTGCGCAATAA

Upstream 100 bases:

>100_bases
TAGCTGAAATAATATGAAGAAAATAGTGTAAGCTCGACAGAGGATTGATTGAACATTTAACTTAAGATGTGCGACTAAGA
CTTAAGATTAGGAGGTCAAA

Downstream 100 bases:

>100_bases
CGAGCGTCGCTAATGCACTAGAATCAAGTGCATAAAAAGCTAATCGCTAGATAATAGACAGATAACAGATACAAAAACGC
CGCAATGCATTGCGGCGTTT

Product: Lipocalin family protein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRKLLLVISVFLLSGCLGMPKLVQPVNDFELNKYLGKWYEIARLDHSFERGLSQVSAEYSLKDDGGVMVINSGFSAAKNE
WKEAEGKAYFVNGDSEGYLKVSFFGPFYGSYVVFELDHENYQYAFISGPDTDYLWLLAKTPTVPPEVLQKFVEMSKARGF
DTDSLIYVQQESAQ

Sequences:

>Translated_174_residues
MRKLLLVISVFLLSGCLGMPKLVQPVNDFELNKYLGKWYEIARLDHSFERGLSQVSAEYSLKDDGGVMVINSGFSAAKNE
WKEAEGKAYFVNGDSEGYLKVSFFGPFYGSYVVFELDHENYQYAFISGPDTDYLWLLAKTPTVPPEVLQKFVEMSKARGF
DTDSLIYVQQESAQ
>Mature_174_residues
MRKLLLVISVFLLSGCLGMPKLVQPVNDFELNKYLGKWYEIARLDHSFERGLSQVSAEYSLKDDGGVMVINSGFSAAKNE
WKEAEGKAYFVNGDSEGYLKVSFFGPFYGSYVVFELDHENYQYAFISGPDTDYLWLLAKTPTVPPEVLQKFVEMSKARGF
DTDSLIYVQQESAQ

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=167, Percent_Identity=31.7365269461078, Blast_Score=79, Evalue=2e-15,
Organism=Escherichia coli, GI1790592, Length=175, Percent_Identity=50.2857142857143, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19717; Mature: 19717

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLLVISVFLLSGCLGMPKLVQPVNDFELNKYLGKWYEIARLDHSFERGLSQVSAEYS
CHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
LKDDGGVMVINSGFSAAKNEWKEAEGKAYFVNGDSEGYLKVSFFGPFYGSYVVFELDHEN
ECCCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEECCC
YQYAFISGPDTDYLWLLAKTPTVPPEVLQKFVEMSKARGFDTDSLIYVQQESAQ
EEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MRKLLLVISVFLLSGCLGMPKLVQPVNDFELNKYLGKWYEIARLDHSFERGLSQVSAEYS
CHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
LKDDGGVMVINSGFSAAKNEWKEAEGKAYFVNGDSEGYLKVSFFGPFYGSYVVFELDHEN
ECCCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEECCC
YQYAFISGPDTDYLWLLAKTPTVPPEVLQKFVEMSKARGFDTDSLIYVQQESAQ
EEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]