| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cysQ [H]
Identifier: 160874622
GI number: 160874622
Start: 1815402
End: 1816208
Strand: Direct
Name: cysQ [H]
Synonym: Sbal195_1505
Alternate gene names: 160874622
Gene position: 1815402-1816208 (Clockwise)
Preceding gene: 160874621
Following gene: 160874623
Centisome position: 33.95
GC content: 49.57
Gene sequence:
>807_bases GTGACAGACAAGACGACAATAGCGCAGACATTGACCAAACAAGATCTACTGCAAGTGGTCGCGATTGCCAAAGCCGCAGG CGATGCCATTATGACGGTTTATGGTCAAGATGACTTTTCAGTGAGCCATAAGGGCGATGATAGTCCCGTGACAGCGGCCG ATTTAGCCGCGCACCACGTGATAGTGGCGGCATTGGCAAAGCAGTTTGTCGGTATTCCTATTATGTCTGAGGAAGCGGCG GATATTGCGTGGGATGAGCGTCGTCAATGGCAAACCTATTGGTTAATTGACCCTTTAGATGGCACTAAGGAATTTATTAA GCGCAATGGTGAGTTTACCGTCAATATTGCGCTTATCCATCAAGGGGTTGCAATCGCAGGAGTGGTATATGCGCCTGTGC TCGATACCTATTATTACGGCGCTAAGCATTTAGGTGCATGGCGTCAACAAGCGGGTCAAGAAAGTCCCTTATTGGGCGCT AAAGCGCCACGCGCGATGCCGATGATTGTTGGCAGTCGCTCGCACTTGAGCCCTGGTTTAGCGCAATATTTACAACAGTT TGGCGAGCATGACATCTTAAGCGTGGGGAGCTCGCTTAAGTTTTGTATGTTGGCAGAAGGCAGTGCCGATCTGTACCCCA GACTTGGCCCAACTAGCGAATGGGATACTGCTGCGGCGCAAGCTGTGCTCGAAAGTGCTGGCGGCACAGTTGTCTGTTAC GACTCAGGTGAACCATTAACTTATAATCAAAAACCTGACATTTTAAACCCTTACTTTATTGCCACAGCCCCAGGCTGGGT GAAATAA
Upstream 100 bases:
>100_bases TCTTAGTCTATTTTGCTTGATGTATGATGAATTTGTTCTAAATTCCCCTTGGATGACAATGGCATAATGCCAAGATATTT AATGCATTAAGGAAGTTTCA
Downstream 100 bases:
>100_bases CGACCGCATAGCATCGATACTTGTTGATGAAAGGGCGGGCTAAACACTGGAGTAGTATTCATGATGCGCATGGGCGTCGA TTTAGGCGGAACAAAAATAG
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTDKTTIAQTLTKQDLLQVVAIAKAAGDAIMTVYGQDDFSVSHKGDDSPVTAADLAAHHVIVAALAKQFVGIPIMSEEAA DIAWDERRQWQTYWLIDPLDGTKEFIKRNGEFTVNIALIHQGVAIAGVVYAPVLDTYYYGAKHLGAWRQQAGQESPLLGA KAPRAMPMIVGSRSHLSPGLAQYLQQFGEHDILSVGSSLKFCMLAEGSADLYPRLGPTSEWDTAAAQAVLESAGGTVVCY DSGEPLTYNQKPDILNPYFIATAPGWVK
Sequences:
>Translated_268_residues MTDKTTIAQTLTKQDLLQVVAIAKAAGDAIMTVYGQDDFSVSHKGDDSPVTAADLAAHHVIVAALAKQFVGIPIMSEEAA DIAWDERRQWQTYWLIDPLDGTKEFIKRNGEFTVNIALIHQGVAIAGVVYAPVLDTYYYGAKHLGAWRQQAGQESPLLGA KAPRAMPMIVGSRSHLSPGLAQYLQQFGEHDILSVGSSLKFCMLAEGSADLYPRLGPTSEWDTAAAQAVLESAGGTVVCY DSGEPLTYNQKPDILNPYFIATAPGWVK >Mature_267_residues TDKTTIAQTLTKQDLLQVVAIAKAAGDAIMTVYGQDDFSVSHKGDDSPVTAADLAAHHVIVAALAKQFVGIPIMSEEAAD IAWDERRQWQTYWLIDPLDGTKEFIKRNGEFTVNIALIHQGVAIAGVVYAPVLDTYYYGAKHLGAWRQQAGQESPLLGAK APRAMPMIVGSRSHLSPGLAQYLQQFGEHDILSVGSSLKFCMLAEGSADLYPRLGPTSEWDTAAAQAVLESAGGTVVCYD SGEPLTYNQKPDILNPYFIATAPGWVK
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=237, Percent_Identity=28.2700421940928, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI116812595, Length=264, Percent_Identity=27.6515151515151, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1790659, Length=245, Percent_Identity=52.6530612244898, Blast_Score=223, Evalue=9e-60, Organism=Escherichia coli, GI1788882, Length=231, Percent_Identity=29.4372294372294, Blast_Score=77, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71995905, Length=284, Percent_Identity=26.056338028169, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71995897, Length=284, Percent_Identity=26.056338028169, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17537869, Length=288, Percent_Identity=26.3888888888889, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193202572, Length=243, Percent_Identity=26.7489711934156, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24651149, Length=270, Percent_Identity=28.1481481481481, Blast_Score=89, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 28938; Mature: 28807
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKTTIAQTLTKQDLLQVVAIAKAAGDAIMTVYGQDDFSVSHKGDDSPVTAADLAAHHV CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHH IVAALAKQFVGIPIMSEEAADIAWDERRQWQTYWLIDPLDGTKEFIKRNGEFTVNIALIH HHHHHHHHHHCCCCCCCCCHHCCHHHCCCCEEEEEEECCCCHHHHHHCCCCEEEEEEEEE QGVAIAGVVYAPVLDTYYYGAKHLGAWRQQAGQESPLLGAKAPRAMPMIVGSRSHLSPGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHH AQYLQQFGEHDILSVGSSLKFCMLAEGSADLYPRLGPTSEWDTAAAQAVLESAGGTVVCY HHHHHHHCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE DSGEPLTYNQKPDILNPYFIATAPGWVK CCCCCCEECCCCCCCCCEEEECCCCCCC >Mature Secondary Structure TDKTTIAQTLTKQDLLQVVAIAKAAGDAIMTVYGQDDFSVSHKGDDSPVTAADLAAHHV CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHH IVAALAKQFVGIPIMSEEAADIAWDERRQWQTYWLIDPLDGTKEFIKRNGEFTVNIALIH HHHHHHHHHHCCCCCCCCCHHCCHHHCCCCEEEEEEECCCCHHHHHHCCCCEEEEEEEEE QGVAIAGVVYAPVLDTYYYGAKHLGAWRQQAGQESPLLGAKAPRAMPMIVGSRSHLSPGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHH AQYLQQFGEHDILSVGSSLKFCMLAEGSADLYPRLGPTSEWDTAAAQAVLESAGGTVVCY HHHHHHHCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE DSGEPLTYNQKPDILNPYFIATAPGWVK CCCCCCEECCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]