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The map label for this gene is tsf

Identifier: 160874599

GI number: 160874599

Start: 1784447

End: 1785298

Strand: Direct

Name: tsf

Synonym: Sbal195_1482

Alternate gene names: 160874599

Gene position: 1784447-1785298 (Clockwise)

Preceding gene: 160874598

Following gene: 160874600

Centisome position: 33.37

GC content: 44.48

Gene sequence:

>852_bases
ATGGCAATTACTGCTGCCCAAGTTAAAGAACTGCGCGACCGTACTGGCGCAGGCATGATGGATTGTAAAAACGCTCTGAC
AGAAACTAACGGCGACATGGAGTTAGCAATTGACAATATGCGTAAGTCTGGTGCTGCCAAGGCTGCTAAAAAAGCGGGTA
ACATCGCTGCTGACGGTACAATTCTGATCAAGAATGGCGAAGGTTTCGCTGCGCTGTTAGAAGTTAACTGTCAAACTGAC
TTCGTTGCTAAAGATTCAAACTTCTTAGCATTCGCGAACGCAGTATTAGATGCCGCTGCTGCATCTAAAGTGACTCTTGA
AGATTTAAAAGCACAGTTCGAAGACGCACGCGTTGCGTTAGTAACTAAAATCGGTGAAAACATCAACATTCGTCGTGTTG
AGTACATCGATGGTGCAAACTTATCTTCATACCGTCACGGTGAGCGCATTGGTGTTGTTGTAGCCGGTGAAGCTGACGAA
GAAACCTTAAAGCACATCGCAATGCACGTTGCTGCTTCTAAGCCTGAATACGTTAACCCAGAAGATGTTCCTGCAGAAAT
CGTTGCAAGAGAACAAGCTCTGCAAATCGAAATGTCTATGAACGAAGGCAAATCGGCAGAGATCGCTGAGAAGATGGTTC
TTGGTCGTATGAAGAAGTTCACCGGTGAGATTTCTCTGACTGGTCAAGCTTACATCATGGAACCAAAGAAAACTGTTGGC
GAAATTCTGAAAGAGAAAGGCGCTAAAGTCACTAACTTCATTCGTTTAGAAGTGGGTGAAGGTATTGAGAAGAAAGAAGA
AGATTTCGCAGCTGAAGTTGCTGCTCAAATCGCTGCTTCTAAAAAGGCTTAA

Upstream 100 bases:

>100_bases
CATCACCCTTATTAACCAAGATTTTTGATTGGTTAACAGGGGCCATTCGGCCCCTGTTTTATATCTGCAAATTAGTCGAT
TTTTTATAGAGGATTTAACA

Downstream 100 bases:

>100_bases
TCGCCAACGCTAAATACCCCCAAGACCGCGGCAATAGCTGCGGTCTTGTTATGACCAGGATAAAAATTATGAGCACCAAT
CCAAAACCCGCATTTAGACG

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MAITAAQVKELRDRTGAGMMDCKNALTETNGDMELAIDNMRKSGAAKAAKKAGNIAADGTILIKNGEGFAALLEVNCQTD
FVAKDSNFLAFANAVLDAAAASKVTLEDLKAQFEDARVALVTKIGENINIRRVEYIDGANLSSYRHGERIGVVVAGEADE
ETLKHIAMHVAASKPEYVNPEDVPAEIVAREQALQIEMSMNEGKSAEIAEKMVLGRMKKFTGEISLTGQAYIMEPKKTVG
EILKEKGAKVTNFIRLEVGEGIEKKEEDFAAEVAAQIAASKKA

Sequences:

>Translated_283_residues
MAITAAQVKELRDRTGAGMMDCKNALTETNGDMELAIDNMRKSGAAKAAKKAGNIAADGTILIKNGEGFAALLEVNCQTD
FVAKDSNFLAFANAVLDAAAASKVTLEDLKAQFEDARVALVTKIGENINIRRVEYIDGANLSSYRHGERIGVVVAGEADE
ETLKHIAMHVAASKPEYVNPEDVPAEIVAREQALQIEMSMNEGKSAEIAEKMVLGRMKKFTGEISLTGQAYIMEPKKTVG
EILKEKGAKVTNFIRLEVGEGIEKKEEDFAAEVAAQIAASKKA
>Mature_282_residues
AITAAQVKELRDRTGAGMMDCKNALTETNGDMELAIDNMRKSGAAKAAKKAGNIAADGTILIKNGEGFAALLEVNCQTDF
VAKDSNFLAFANAVLDAAAASKVTLEDLKAQFEDARVALVTKIGENINIRRVEYIDGANLSSYRHGERIGVVVAGEADEE
TLKHIAMHVAASKPEYVNPEDVPAEIVAREQALQIEMSMNEGKSAEIAEKMVLGRMKKFTGEISLTGQAYIMEPKKTVGE
ILKEKGAKVTNFIRLEVGEGIEKKEEDFAAEVAAQIAASKKA

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=287, Percent_Identity=24.7386759581882, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI1786366, Length=275, Percent_Identity=70.1818181818182, Blast_Score=380, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI17561440, Length=292, Percent_Identity=25.6849315068493, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_SHEB2 (B8E7R5)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002358810.1
- ProteinModelPortal:   B8E7R5
- SMR:   B8E7R5
- GeneID:   7089470
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_2901
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- ProtClustDB:   PRK09377
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 30392; Mature: 30261

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITAAQVKELRDRTGAGMMDCKNALTETNGDMELAIDNMRKSGAAKAAKKAGNIAADGT
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHCCCEECCCE
ILIKNGEGFAALLEVNCQTDFVAKDSNFLAFANAVLDAAAASKVTLEDLKAQFEDARVAL
EEEECCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEE
VTKIGENINIRRVEYIDGANLSSYRHGERIGVVVAGEADEETLKHIAMHVAASKPEYVNP
EEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCC
EDVPAEIVAREQALQIEMSMNEGKSAEIAEKMVLGRMKKFTGEISLTGQAYIMEPKKTVG
CCCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEEECCHHHHH
EILKEKGAKVTNFIRLEVGEGIEKKEEDFAAEVAAQIAASKKA
HHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AITAAQVKELRDRTGAGMMDCKNALTETNGDMELAIDNMRKSGAAKAAKKAGNIAADGT
CCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHCCCEECCCE
ILIKNGEGFAALLEVNCQTDFVAKDSNFLAFANAVLDAAAASKVTLEDLKAQFEDARVAL
EEEECCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEE
VTKIGENINIRRVEYIDGANLSSYRHGERIGVVVAGEADEETLKHIAMHVAASKPEYVNP
EEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCC
EDVPAEIVAREQALQIEMSMNEGKSAEIAEKMVLGRMKKFTGEISLTGQAYIMEPKKTVG
CCCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEEECCHHHHH
EILKEKGAKVTNFIRLEVGEGIEKKEEDFAAEVAAQIAASKKA
HHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA