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The map label for this gene is rdgC [H]

Identifier: 160874519

GI number: 160874519

Start: 1679216

End: 1680130

Strand: Reverse

Name: rdgC [H]

Synonym: Sbal195_1401

Alternate gene names: 160874519

Gene position: 1680130-1679216 (Counterclockwise)

Preceding gene: 160874525

Following gene: 160874517

Centisome position: 31.42

GC content: 44.59

Gene sequence:

>915_bases
ATGTGGTTTAAAAATCTTACTCTTTATCGTTTCAATAAACCTTTTGCCGTCGAAACCGAAGCGCTAGAAACTGCGTTGGC
CGATTTCACTTTCTCTCCGTGCTCAAGCCAAGATGTCAGTAAATTTGGTTTCTCAAATGCGTTAGGCAAAAAAGGCAGCT
CCTTGGTACACAGTGCCGACAATCGCCATCTGATCTGTGTAACTAAAGAAGAGAAAATTCTCCCAGGCCAAGTCATCAAA
GAAGCCTTAGAAGAAAAAGTTGCCCTCATTGAAGATGAAGAAAATCGTAAGATGGCGAAAAAAGAAAAAGATGCGCTAAA
AGATGAAATCATTACTAGCTTACTGCCACGCGCTTTTTCACGCCGCAGCCAAACCCATGCCTTGATTTTGCCAGAGCTGG
AAATGATCCTTGTCGACAGTTCAAGTGCCACTAAAACCGAAGAGCTGTTAGCATTATTACGTAAAGCGCTCGGTAGTTTG
CCGGTGATCCCATTGAGCTTTAAAGCGCCAGTCGAATCCAATTTAACCGAATGGTTAAAACTTGGCAGCGCGCCATTACC
TTTTGAAATGCAAGATGAAGCTGAACTTAAATCCGAAGCAGATGAAGGCGGCATTGTACGTTTCAAGCAACAGGATTTAA
AAGAAGACGAAGTCTTAGCTCACCTCGCAACAGGCAAGCAAGTACACAAGTTAGCACTGCATTTCGGCCAGTCGATTGCA
CTATTATTGCAATCGGATGCCAGCGTAAAACGTCTTAAATTCTCTGAAGAATTTAGAGCGGGTAACGATGAAGTGGGCAC
AGACGACCCTATGGCACGTTTAGATGCCGACTTTGCCTTAATGGGCAGCGAGTTAGTCGCCTTGATGCATGCACTCGTGG
CAGCACTAGGTGGGCTCGAAGAAGCACAAGTTTAA

Upstream 100 bases:

>100_bases
TGAATTCTGATCCGCCGCTAGAAATTAGCTATCGAACACAGGTTTACCCCGCCCAAACTATGCCGTAAACTGCCACTTTA
ATTTTCAATGAGCGCCTCTT

Downstream 100 bases:

>100_bases
GCCTAAGCAAGTTAGGTAAACTAAATCTGCGACTCACTCGCATTCTTCTTGTATGAATGAGTTGAAATACAGGATAACAA
AAGGCGCACCGTCTAAATGA

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSADNRHLICVTKEEKILPGQVIK
EALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFSRRSQTHALILPELEMILVDSSSATKTEELLALLRKALGSL
PVIPLSFKAPVESNLTEWLKLGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLEEAQV

Sequences:

>Translated_304_residues
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSADNRHLICVTKEEKILPGQVIK
EALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFSRRSQTHALILPELEMILVDSSSATKTEELLALLRKALGSL
PVIPLSFKAPVESNLTEWLKLGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLEEAQV
>Mature_304_residues
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSADNRHLICVTKEEKILPGQVIK
EALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFSRRSQTHALILPELEMILVDSSSATKTEELLALLRKALGSL
PVIPLSFKAPVESNLTEWLKLGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLEEAQV

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=303, Percent_Identity=49.8349834983498, Blast_Score=297, Evalue=5e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 33532; Mature: 33532

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSAD
CCCCCEEEEEECCCCEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCC
NRHLICVTKEEKILPGQVIKEALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFS
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSQTHALILPELEMILVDSSSATKTEELLALLRKALGSLPVIPLSFKAPVESNLTEWLK
HCCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
LGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
CCCCCCCCCCCCHHHHHHCCCCCCEEEECHHCCCHHHHHHHHHCCHHHHHHHHHHCCHHE
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLE
EEHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCH
EAQV
HCCC
>Mature Secondary Structure
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSAD
CCCCCEEEEEECCCCEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCC
NRHLICVTKEEKILPGQVIKEALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFS
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSQTHALILPELEMILVDSSSATKTEELLALLRKALGSLPVIPLSFKAPVESNLTEWLK
HCCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
LGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
CCCCCCCCCCCCHHHHHHCCCCCCEEEECHHCCCHHHHHHHHHCCHHHHHHHHHHCCHHE
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLE
EEHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCH
EAQV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA