| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is lpp [C]
Identifier: 160874350
GI number: 160874350
Start: 1466177
End: 1466443
Strand: Reverse
Name: lpp [C]
Synonym: Sbal195_1231
Alternate gene names: 160874350
Gene position: 1466443-1466177 (Counterclockwise)
Preceding gene: 160874351
Following gene: 160874345
Centisome position: 27.42
GC content: 44.57
Gene sequence:
>267_bases ATGAACAAAAAAGTACTGATGATTGCTGGTTTAGCAATGACTGCCCTACTAGGTGGTTGCGCGAACACTACTGCTCTGGA AGAAAGCGTTGCAACTCTGGGCAACAAAGTTGATCAATTGTCAGCTGATGTTGGTTCTCTGAAATCAGAGCAAAGCAAAC TGTCTGCAGACGTTAAAGATGCGAAAGCAGCATCTATGGACGCACAAGCAGAAGCTAAACGCGCAAACGACCGTTTAGAC AACGTTGCTTCTCGTTACAAGAAGTAA
Upstream 100 bases:
>100_bases ATATTCGTAGCAAATTAAAATAGCTATGTCATAATTAGGCAGTTTCGCTTACAAAGTAACGAAACATTCAAATCCAACCT ATTTTAAGGGATTTTTTACA
Downstream 100 bases:
>100_bases TGAAAGGTAATTTAGCTTACTATTTAGTAAGTTAAGACAAAAGGCTTAAGAAAGATGAAAGCGTTAAGCGCATCAATCTA AGCCTTTTTTTATGCCTGTC
Product: major outer membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MNKKVLMIAGLAMTALLGGCANTTALEESVATLGNKVDQLSADVGSLKSEQSKLSADVKDAKAASMDAQAEAKRANDRLD NVASRYKK
Sequences:
>Translated_88_residues MNKKVLMIAGLAMTALLGGCANTTALEESVATLGNKVDQLSADVGSLKSEQSKLSADVKDAKAASMDAQAEAKRANDRLD NVASRYKK >Mature_88_residues MNKKVLMIAGLAMTALLGGCANTTALEESVATLGNKVDQLSADVGSLKSEQSKLSADVKDAKAASMDAQAEAKRANDRLD NVASRYKK
Specific function: Unknown
COG id: COG4238
COG function: function code M; Murein lipoprotein
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9200; Mature: 9200
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKVLMIAGLAMTALLGGCANTTALEESVATLGNKVDQLSADVGSLKSEQSKLSADVKD CCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAASMDAQAEAKRANDRLDNVASRYKK HHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKKVLMIAGLAMTALLGGCANTTALEESVATLGNKVDQLSADVGSLKSEQSKLSADVKD CCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAASMDAQAEAKRANDRLDNVASRYKK HHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA