| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is rstB [H]
Identifier: 160874223
GI number: 160874223
Start: 1304269
End: 1305537
Strand: Reverse
Name: rstB [H]
Synonym: Sbal195_1103
Alternate gene names: 160874223
Gene position: 1305537-1304269 (Counterclockwise)
Preceding gene: 160874224
Following gene: 160874221
Centisome position: 24.41
GC content: 49.01
Gene sequence:
>1269_bases GTGAAACGTCTCTTTATCAGTTTATATCTGCTACTCAGTCTCAGCGTGCTTGGGATTGGCTGGACACTCGACAGCCTGTG GCAGAAAAATGTGGATGACAATAACGCCCTCGATGCGCCATTAGTGGCCTTGGCGCAATTGTTAGCGGAACTGCCTCCCG ATACCCGCCAAAGGTATCTGGAGGCGATCCCAGTCAATCCTGTGATGCCGTTGCAATTGCTCAGTGCCGATCAAGTCGCG CTAGCAGACAATCAAGCTCTCAGCACCAGTACTGTGTTCACCACCACGACCAATGACGATAACCTACTGCAATTTATCCG AGTCGGCGATCAAGTCTTAATGGCGGGGCCGCTGGACATCGATCCCAGAGCCAACCTTCGCAGCCTGTTCACCCTGTTCT TCTATTTATCACTCGCCCTGGTCGCGCTGATCTGGGTTGGCCCGCTTTCTCGGGATTTGAGCATACTGCGTAAAGCTACC AAAGAGTTTGGCGAAGCCAAATGGAACACGCGGATTACCCTGTCAAATCGCTCTCAGGTCAAACCCTTAGCCAATACCTT TAACGAAATGGCGCGGCATATCAGTGCCTTGATTGAGAACCAGAAACACCTGTCTAATGCGGTCTCCCATGAGATCCGTA CGCCGCTGGCGAGGCTCAAATTCGCCCTTGCACTCATGCCCATGTATTGTCAGCCTGATTCGGACGAACAAAAGCGCCAA GACTTTCTCGATGAAATGCAGCTCGATATCAAAGAAATGGAAGACTTGCTTCAGGAACTGCTAACCTACGCCAGCTTAGA GTCCCAGCGAGAAGGTATCCAGTTAGATGAGTACGATTTAATTAATCTCATCAATCAAAGCATTAAGCGTCTAGAAAGCT TGAGCCCAACACCTATTACCCTTAAAACAGAAGTCGAAAAACTGCCCTTGTTTGGGGAACCCGCATTAATTGAACGTGCG CTGCAGAATTTACTGACCAATGCCCAACGCTTTGCCCGTACTGAAATCGTTATTGAAGTTAAGCAGACCCAGCATAGGGT CAATTTAAGTGTGAGTAACGACGGCGAACCTATACCAGCAGTAGATTTACCTAAAGTGTTCGAGCCTTTTTATCGCAGCC AATCGGTGCAAAATGGCAATAAGGGACACGGTTTGGGACTGGCGATCATTAAACGGATTATGCAGCGGCATCAAGGGAAT GTGAGCGTCACCAGCGATGCGCAACATACCCGATTTAATTTAATTTGGCCGAAGAAGCGCAAGCTGTAA
Upstream 100 bases:
>100_bases AACTCAACGATAATATCGAGACACCTTTCAGAATTAAAACCGTTTGGGGACAAGGTTACCTCTTTGCTCCTGAAGCCTGG AATAACTAAGCACAGATACA
Downstream 100 bases:
>100_bases TAGGGATTGGGATTAAACGACTGCGCATCTGTAATTCATCAATGCGCTAATTCTACAAGCCAGTAAAACAAGTGAGTGAA ACAAGACTATTTAACTGGCC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKRLFISLYLLLSLSVLGIGWTLDSLWQKNVDDNNALDAPLVALAQLLAELPPDTRQRYLEAIPVNPVMPLQLLSADQVA LADNQALSTSTVFTTTTNDDNLLQFIRVGDQVLMAGPLDIDPRANLRSLFTLFFYLSLALVALIWVGPLSRDLSILRKAT KEFGEAKWNTRITLSNRSQVKPLANTFNEMARHISALIENQKHLSNAVSHEIRTPLARLKFALALMPMYCQPDSDEQKRQ DFLDEMQLDIKEMEDLLQELLTYASLESQREGIQLDEYDLINLINQSIKRLESLSPTPITLKTEVEKLPLFGEPALIERA LQNLLTNAQRFARTEIVIEVKQTQHRVNLSVSNDGEPIPAVDLPKVFEPFYRSQSVQNGNKGHGLGLAIIKRIMQRHQGN VSVTSDAQHTRFNLIWPKKRKL
Sequences:
>Translated_422_residues MKRLFISLYLLLSLSVLGIGWTLDSLWQKNVDDNNALDAPLVALAQLLAELPPDTRQRYLEAIPVNPVMPLQLLSADQVA LADNQALSTSTVFTTTTNDDNLLQFIRVGDQVLMAGPLDIDPRANLRSLFTLFFYLSLALVALIWVGPLSRDLSILRKAT KEFGEAKWNTRITLSNRSQVKPLANTFNEMARHISALIENQKHLSNAVSHEIRTPLARLKFALALMPMYCQPDSDEQKRQ DFLDEMQLDIKEMEDLLQELLTYASLESQREGIQLDEYDLINLINQSIKRLESLSPTPITLKTEVEKLPLFGEPALIERA LQNLLTNAQRFARTEIVIEVKQTQHRVNLSVSNDGEPIPAVDLPKVFEPFYRSQSVQNGNKGHGLGLAIIKRIMQRHQGN VSVTSDAQHTRFNLIWPKKRKL >Mature_422_residues MKRLFISLYLLLSLSVLGIGWTLDSLWQKNVDDNNALDAPLVALAQLLAELPPDTRQRYLEAIPVNPVMPLQLLSADQVA LADNQALSTSTVFTTTTNDDNLLQFIRVGDQVLMAGPLDIDPRANLRSLFTLFFYLSLALVALIWVGPLSRDLSILRKAT KEFGEAKWNTRITLSNRSQVKPLANTFNEMARHISALIENQKHLSNAVSHEIRTPLARLKFALALMPMYCQPDSDEQKRQ DFLDEMQLDIKEMEDLLQELLTYASLESQREGIQLDEYDLINLINQSIKRLESLSPTPITLKTEVEKLPLFGEPALIERA LQNLLTNAQRFARTEIVIEVKQTQHRVNLSVSNDGEPIPAVDLPKVFEPFYRSQSVQNGNKGHGLGLAIIKRIMQRHQGN VSVTSDAQHTRFNLIWPKKRKL
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=433, Percent_Identity=29.3302540415704, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI1786783, Length=243, Percent_Identity=30.0411522633745, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790346, Length=224, Percent_Identity=26.7857142857143, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1789808, Length=285, Percent_Identity=26.3157894736842, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI87082128, Length=301, Percent_Identity=25.2491694352159, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1786600, Length=219, Percent_Identity=28.310502283105, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790861, Length=200, Percent_Identity=32, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI145693157, Length=235, Percent_Identity=26.3829787234043, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788393, Length=262, Percent_Identity=23.6641221374046, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789403, Length=234, Percent_Identity=26.4957264957265, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788279, Length=248, Percent_Identity=24.1935483870968, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=26.6968325791855, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1786912, Length=216, Percent_Identity=26.3888888888889, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47777; Mature: 47777
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFISLYLLLSLSVLGIGWTLDSLWQKNVDDNNALDAPLVALAQLLAELPPDTRQRYL CHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH EAIPVNPVMPLQLLSADQVALADNQALSTSTVFTTTTNDDNLLQFIRVGDQVLMAGPLDI HHCCCCCCCCHHHHCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEECCCCC DPRANLRSLFTLFFYLSLALVALIWVGPLSRDLSILRKATKEFGEAKWNTRITLSNRSQV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC KPLANTFNEMARHISALIENQKHLSNAVSHEIRTPLARLKFALALMPMYCQPDSDEQKRQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH DFLDEMQLDIKEMEDLLQELLTYASLESQREGIQLDEYDLINLINQSIKRLESLSPTPIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE LKTEVEKLPLFGEPALIERALQNLLTNAQRFARTEIVIEVKQTQHRVNLSVSNDGEPIPA EECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCCC VDLPKVFEPFYRSQSVQNGNKGHGLGLAIIKRIMQRHQGNVSVTSDAQHTRFNLIWPKKR CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCHHC KL CC >Mature Secondary Structure MKRLFISLYLLLSLSVLGIGWTLDSLWQKNVDDNNALDAPLVALAQLLAELPPDTRQRYL CHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH EAIPVNPVMPLQLLSADQVALADNQALSTSTVFTTTTNDDNLLQFIRVGDQVLMAGPLDI HHCCCCCCCCHHHHCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEECCCCC DPRANLRSLFTLFFYLSLALVALIWVGPLSRDLSILRKATKEFGEAKWNTRITLSNRSQV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC KPLANTFNEMARHISALIENQKHLSNAVSHEIRTPLARLKFALALMPMYCQPDSDEQKRQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH DFLDEMQLDIKEMEDLLQELLTYASLESQREGIQLDEYDLINLINQSIKRLESLSPTPIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE LKTEVEKLPLFGEPALIERALQNLLTNAQRFARTEIVIEVKQTQHRVNLSVSNDGEPIPA EECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCCC VDLPKVFEPFYRSQSVQNGNKGHGLGLAIIKRIMQRHQGNVSVTSDAQHTRFNLIWPKKR CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCHHC KL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]