| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874221
Identifier: 160874221
GI number: 160874221
Start: 1303098
End: 1303634
Strand: Reverse
Name: 160874221
Synonym: Sbal195_1101
Alternate gene names: NA
Gene position: 1303634-1303098 (Counterclockwise)
Preceding gene: 160874223
Following gene: 160874219
Centisome position: 24.38
GC content: 49.35
Gene sequence:
>537_bases ATGGGATACCGTCACTTTGCCAGTCTGCTCGTCGCTGTTGCCTTATTAAGCGCCTGCAGCAGTAAACCGAAAAACGATTA CGATCTCAATTACGACTTCAGCACACTGCACAGCTTTACCCAGCTAACGCCACAGCCCACAGACGACCCGCTCAGCGCCC AGCGCATTCAAGTAGAAATCAACAACCAGTTGACTCAAAAAGGCTTTGTCGAAAATACCCAAGCCCCCGACTTTAACGTC GCCTACGCCCTACTGACCCAAGATAAACCTAAGGATTCAGGGTTATCGATTGGATTAGGCACAGGCACATTCGGCCGTTC AGGGGGCATAGGAATTGGCACTAGCGTTGGGGTACCACTTGGCAGTGATACCGCTAAAATTCAAACTATTCAGATAGATA TTGTCGACCCTAAAACCAAAACACTCATTTGGCGTGGTAGCGACAGTTATGATTTCGATGCAGGCGGCAATGAGAAAGCC CAAGATACCGCCAAAGCCGTTAGCCGAATTTTGGCGCAGTTCCCACCGACAAAATGA
Upstream 100 bases:
>100_bases TTTAAAGCGATTCAAATACAACACACTTATCTAAAGTACTTGCAGAAACAACCTTAATCAAGGCACATTGAACAGAGTTT GTACAACTTGGAGCACTATC
Downstream 100 bases:
>100_bases TCATGAAGAGTCAATAAAAATGGGCGAATTCCGCCCATTTTTATTGATGAAGAATGCTTGTAGTCAAATAACTTAGGCGA AATATCTTGGACTCAGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MGYRHFASLLVAVALLSACSSKPKNDYDLNYDFSTLHSFTQLTPQPTDDPLSAQRIQVEINNQLTQKGFVENTQAPDFNV AYALLTQDKPKDSGLSIGLGTGTFGRSGGIGIGTSVGVPLGSDTAKIQTIQIDIVDPKTKTLIWRGSDSYDFDAGGNEKA QDTAKAVSRILAQFPPTK
Sequences:
>Translated_178_residues MGYRHFASLLVAVALLSACSSKPKNDYDLNYDFSTLHSFTQLTPQPTDDPLSAQRIQVEINNQLTQKGFVENTQAPDFNV AYALLTQDKPKDSGLSIGLGTGTFGRSGGIGIGTSVGVPLGSDTAKIQTIQIDIVDPKTKTLIWRGSDSYDFDAGGNEKA QDTAKAVSRILAQFPPTK >Mature_177_residues GYRHFASLLVAVALLSACSSKPKNDYDLNYDFSTLHSFTQLTPQPTDDPLSAQRIQVEINNQLTQKGFVENTQAPDFNVA YALLTQDKPKDSGLSIGLGTGTFGRSGGIGIGTSVGVPLGSDTAKIQTIQIDIVDPKTKTLIWRGSDSYDFDAGGNEKAQ DTAKAVSRILAQFPPTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19098; Mature: 18966
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYRHFASLLVAVALLSACSSKPKNDYDLNYDFSTLHSFTQLTPQPTDDPLSAQRIQVEI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEE NNQLTQKGFVENTQAPDFNVAYALLTQDKPKDSGLSIGLGTGTFGRSGGIGIGTSVGVPL CCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GSDTAKIQTIQIDIVDPKTKTLIWRGSDSYDFDAGGNEKAQDTAKAVSRILAQFPPTK CCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GYRHFASLLVAVALLSACSSKPKNDYDLNYDFSTLHSFTQLTPQPTDDPLSAQRIQVEI CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEE NNQLTQKGFVENTQAPDFNVAYALLTQDKPKDSGLSIGLGTGTFGRSGGIGIGTSVGVPL CCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GSDTAKIQTIQIDIVDPKTKTLIWRGSDSYDFDAGGNEKAQDTAKAVSRILAQFPPTK CCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA