Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is exeC [H]
Identifier: 160873278
GI number: 160873278
Start: 180229
End: 181158
Strand: Direct
Name: exeC [H]
Synonym: Sbal195_0152
Alternate gene names: 160873278
Gene position: 180229-181158 (Clockwise)
Preceding gene: 160873271
Following gene: 160873279
Centisome position: 3.37
GC content: 47.1
Gene sequence:
>930_bases ATGGATTTATTAGATAAAGTTATCGCAAAAGCCATTGGCATGCCCCATAAACCCCTAAGCCGGATTGTCTTCTGGTTGGG CTTTATTGTGATCATGTTGTTAGCTGCGCAAATTACATGGAAATTAGTGCCTACTAGCTCATCAGCCAGTGCTTGGTCAC CAACGCCCGTAAGCGTGAATGGCAAAGGTGCCGGTCAGGTTGATCTCGCAGGTCTGCAGCAGCTTGGACTCTTTGGTAAG GCGGATGCGACATCTGATAAACCTAAAGTCGAAGCAGTCGAGACTGTGACTGACGCACCTAAGACTACACTCTCTATTCA GCTGACTGGGGTTGTCGCATCGACAGCGGACCAAAAAGGCCTCGCAATTATTGAGTCAAACGGCAGCCAAGATACTTATA GCCTCGGCGATAAAATTAAGGGCACATCTGCATCACTCAAAGAAGTCTATGCCGACCGTATCATCATCACTAACGCTGGC CGTTACGAGACCTTAATGCTCGATGGCTTAGTGTACACCAGCCAAAGCCCAGCCAATCAGCAGTTACAACAAGCTAAGAG TAATAAGGCCGGCTCGGCAGTGAGCCGTGTTGATCAACGTAACAATGCCGATATTTCCCAAGAACTCGCCGAATCCCGCA CCGAATTGTTAGCCGACCCGAGCAAGATCACCGATTACATTGCCATTTCACCTGTGAGACAGGGTGATTCTGTGGCGGGT TATCGTTTGAATCCGGGTAAAGACGCCAATTTGTTCAAGCAGGCGGGTTTTAAAGCCAATGATTTAGCCAAATCGATTAA TGGATACGACTTGACCGTAATGAGTCAGGCGTTAGAAATGATGAGCCAATTATCCGAGTTAACCGAAGTATCAATTATGG TTGAACGGGAAGGACAATTGGTTGAAATCATGTTTAGTTTGCCGCAATAA
Upstream 100 bases:
>100_bases TAAGGGCTTGTTGCCAAATGCAGCCTAGGTTAGCATGAGGCGGTTATTGCCTAATTATTATAATCAGAACAGAGACCTGT ATCGAGGGTCCACATAAAAT
Downstream 100 bases:
>100_bases CACGCGTTAGAGGAAAGAAAAAGAATGAATAACAAAAGGATTCGACGCAAGCTGATTGCAGGGATTGTTGCGGGTGCAGC CATGTTCTCCTCCCAATTCG
Product: general secretion pathway protein C
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MDLLDKVIAKAIGMPHKPLSRIVFWLGFIVIMLLAAQITWKLVPTSSSASAWSPTPVSVNGKGAGQVDLAGLQQLGLFGK ADATSDKPKVEAVETVTDAPKTTLSIQLTGVVASTADQKGLAIIESNGSQDTYSLGDKIKGTSASLKEVYADRIIITNAG RYETLMLDGLVYTSQSPANQQLQQAKSNKAGSAVSRVDQRNNADISQELAESRTELLADPSKITDYIAISPVRQGDSVAG YRLNPGKDANLFKQAGFKANDLAKSINGYDLTVMSQALEMMSQLSELTEVSIMVEREGQLVEIMFSLPQ
Sequences:
>Translated_309_residues MDLLDKVIAKAIGMPHKPLSRIVFWLGFIVIMLLAAQITWKLVPTSSSASAWSPTPVSVNGKGAGQVDLAGLQQLGLFGK ADATSDKPKVEAVETVTDAPKTTLSIQLTGVVASTADQKGLAIIESNGSQDTYSLGDKIKGTSASLKEVYADRIIITNAG RYETLMLDGLVYTSQSPANQQLQQAKSNKAGSAVSRVDQRNNADISQELAESRTELLADPSKITDYIAISPVRQGDSVAG YRLNPGKDANLFKQAGFKANDLAKSINGYDLTVMSQALEMMSQLSELTEVSIMVEREGQLVEIMFSLPQ >Mature_309_residues MDLLDKVIAKAIGMPHKPLSRIVFWLGFIVIMLLAAQITWKLVPTSSSASAWSPTPVSVNGKGAGQVDLAGLQQLGLFGK ADATSDKPKVEAVETVTDAPKTTLSIQLTGVVASTADQKGLAIIESNGSQDTYSLGDKIKGTSASLKEVYADRIIITNAG RYETLMLDGLVYTSQSPANQQLQQAKSNKAGSAVSRVDQRNNADISQELAESRTELLADPSKITDYIAISPVRQGDSVAG YRLNPGKDANLFKQAGFKANDLAKSINGYDLTVMSQALEMMSQLSELTEVSIMVEREGQLVEIMFSLPQ
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3031
COG function: function code U; Type II secretory pathway, component PulC
Gene ontology:
Cell location: Cell inner membrane (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001639 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33082; Mature: 33082
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLDKVIAKAIGMPHKPLSRIVFWLGFIVIMLLAAQITWKLVPTSSSASAWSPTPVSVN CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEC GKGAGQVDLAGLQQLGLFGKADATSDKPKVEAVETVTDAPKTTLSIQLTGVVASTADQKG CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEECCCCCC LAIIESNGSQDTYSLGDKIKGTSASLKEVYADRIIITNAGRYETLMLDGLVYTSQSPANQ EEEEECCCCCCHHHHCCCCCCCHHHHHHHHHCEEEEECCCCEEEEEEECEEEECCCCHHH QLQQAKSNKAGSAVSRVDQRNNADISQELAESRTELLADPSKITDYIAISPVRQGDSVAG HHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHEEEECCCCCCCCCCC YRLNPGKDANLFKQAGFKANDLAKSINGYDLTVMSQALEMMSQLSELTEVSIMVEREGQL EECCCCCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCE VEIMFSLPQ EEEEEECCC >Mature Secondary Structure MDLLDKVIAKAIGMPHKPLSRIVFWLGFIVIMLLAAQITWKLVPTSSSASAWSPTPVSVN CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEC GKGAGQVDLAGLQQLGLFGKADATSDKPKVEAVETVTDAPKTTLSIQLTGVVASTADQKG CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEECCCCCC LAIIESNGSQDTYSLGDKIKGTSASLKEVYADRIIITNAGRYETLMLDGLVYTSQSPANQ EEEEECCCCCCHHHHCCCCCCCHHHHHHHHHCEEEEECCCCEEEEEEECEEEECCCCHHH QLQQAKSNKAGSAVSRVDQRNNADISQELAESRTELLADPSKITDYIAISPVRQGDSVAG HHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHEEEECCCCCCCCCCC YRLNPGKDANLFKQAGFKANDLAKSINGYDLTVMSQALEMMSQLSELTEVSIMVEREGQL EECCCCCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCE VEIMFSLPQ EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA