Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873257
Identifier: 160873257
GI number: 160873257
Start: 154179
End: 154601
Strand: Direct
Name: 160873257
Synonym: Sbal195_0131
Alternate gene names: NA
Gene position: 154179-154601 (Clockwise)
Preceding gene: 160873255
Following gene: 160873258
Centisome position: 2.88
GC content: 44.68
Gene sequence:
>423_bases ATGAAAAAATTACTCTCAGTCTGTCTGATCCTGTTTACCAGTGTTTTCAGTGTTTATGCGGCCGATGAAAAAGAAGCGGC ACCTGCAGCGACGCCTACGGGTGAGTACGCCTACTATGGTTTTGAGCCCGAAATCGTCACTAACTACATTTCTAACCGTA AGAAACTAGGGTTTGTGAAGATCAGCGTCGAGTTAATGGTTAAGAGCCCAGATGATTTGGTCACAGTTGAGCGCCACGAT CCGCTATTGCGCGCCGCTATCGTTGAAGTGTTAGGCAATCAATCAGAAGAAAAGATTAAGTCACTCACTGGCCGTGAAGA AATCCGTCGTGAGTGCTTCGATATGGTCAATAATCTGCTCACTCAAGAAGCGGGTAAAGCCTTGATTGTAAACTTACTCT TTACCTCTTATCTGTACGATTAA
Upstream 100 bases:
>100_bases TATAGGCAAACGTCGGCAGTCTAGCATGTCGCGACGCGAGCAGATAGATTGGGAAGTTTCTTCCATTACCATTATTGTTT TTAGGGAGCCGTAAGCCGCT
Downstream 100 bases:
>100_bases TTCATTGTCTTATTTTATGGGCTGACTGATGTCGGCCCAGTGTTACAAGAGCTGCTATGTCAAAACCTGCCGTGAAATCC GTTCCATCAGCGACTGCGAA
Product: flagellar basal body-associated protein FliL-like protein
Products: NA
Alternate protein names: Flagellar Basal Body-Associated Protein FliL; Flagellar Protein FliL; Flagellar Biosynthesis Protein FliL
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKKLLSVCLILFTSVFSVYAADEKEAAPAATPTGEYAYYGFEPEIVTNYISNRKKLGFVKISVELMVKSPDDLVTVERHD PLLRAAIVEVLGNQSEEKIKSLTGREEIRRECFDMVNNLLTQEAGKALIVNLLFTSYLYD
Sequences:
>Translated_140_residues MKKLLSVCLILFTSVFSVYAADEKEAAPAATPTGEYAYYGFEPEIVTNYISNRKKLGFVKISVELMVKSPDDLVTVERHD PLLRAAIVEVLGNQSEEKIKSLTGREEIRRECFDMVNNLLTQEAGKALIVNLLFTSYLYD >Mature_140_residues MKKLLSVCLILFTSVFSVYAADEKEAAPAATPTGEYAYYGFEPEIVTNYISNRKKLGFVKISVELMVKSPDDLVTVERHD PLLRAAIVEVLGNQSEEKIKSLTGREEIRRECFDMVNNLLTQEAGKALIVNLLFTSYLYD
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15758; Mature: 15758
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSVCLILFTSVFSVYAADEKEAAPAATPTGEYAYYGFEPEIVTNYISNRKKLGFVK CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEE ISVELMVKSPDDLVTVERHDPLLRAAIVEVLGNQSEEKIKSLTGREEIRRECFDMVNNLL EEEEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH TQEAGKALIVNLLFTSYLYD HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLLSVCLILFTSVFSVYAADEKEAAPAATPTGEYAYYGFEPEIVTNYISNRKKLGFVK CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEE ISVELMVKSPDDLVTVERHDPLLRAAIVEVLGNQSEEKIKSLTGREEIRRECFDMVNNLL EEEEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH TQEAGKALIVNLLFTSYLYD HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA