Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is yigZ [H]
Identifier: 160873148
GI number: 160873148
Start: 27191
End: 27805
Strand: Direct
Name: yigZ [H]
Synonym: Sbal195_0022
Alternate gene names: 160873148
Gene position: 27191-27805 (Clockwise)
Preceding gene: 160873147
Following gene: 160873149
Centisome position: 0.51
GC content: 49.76
Gene sequence:
>615_bases GTGCTCGAAAGTTATAGCGTTCCCTGTGAAGATATCGTGGTCGAAGAAGAGATAAAGCATAGCCGCTTTATCTCTTTTCT GTTTCATTGCGATAGCTTTGATAAATTTAAGTTAGTACTCACTGACATAAAGCGTGACTATCCCGGCGCAAGCCATTATT GCTCAGCTTTTGTGGCTGGCGCACCGGATGATAGCGTCTTGATTGGTTCGGGTGATGACGGCGAACCTGCCGGCAGTGCT GGTCGCCCTATGTTAGCTGTGTTGCAAGGGGCGAATATCGGCGAAGTGGGCGCTGTTGTGGTGCGTTATTATGGCGGCAC TAAGCTAGGCGTAGGTGGACTGGTTCGGGCTTATACGTCAGGCTTAAGGCAAGGTTTGGTTCAATTGCCGACGCGACTTA AACAGTTACGTTATCCCGCCAAGTTGCATTGTGATTATGCGCAGCTGCGCGATGTGGAACATCTATTACAGCAAGTCGAT GCCGTGATAATCGATAAGCAATTTGCTGAAGCGGTCGATATTGTGTTCGAGATAGGCAGGCAGCAACAGGCATTACTGTG TGAGTCGCTGGCGACGCTCAGTCAGGGAAGTTTGAGGCCTGAGTTTGAGCTGTGA
Upstream 100 bases:
>100_bases CATCGAAGATAACGTCATAGTGCATCAAGATAGAAACGAGAACATGACCCGTGAACTCGGTTTGACCGATTGATCATAGG GTAAAGATTAGGGCGGATGT
Downstream 100 bases:
>100_bases TGCCTGCGTAAATTATGCCAAAATAGCCCAAATGCTGAAAATACCTTTGCAGCCAATGGAATGATTGAACTCGCTTAATG CAATATAAAACCATAATACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAGAPDDSVLIGSGDDGEPAGSA GRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTSGLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVD AVIIDKQFAEAVDIVFEIGRQQQALLCESLATLSQGSLRPEFEL
Sequences:
>Translated_204_residues MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAGAPDDSVLIGSGDDGEPAGSA GRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTSGLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVD AVIIDKQFAEAVDIVFEIGRQQQALLCESLATLSQGSLRPEFEL >Mature_204_residues MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAGAPDDSVLIGSGDDGEPAGSA GRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTSGLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVD AVIIDKQFAEAVDIVFEIGRQQQALLCESLATLSQGSLRPEFEL
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=198, Percent_Identity=45.959595959596, Blast_Score=157, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22322; Mature: 22322
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCC APDDSVLIGSGDDGEPAGSAGRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTS CCCCCEEEECCCCCCCCCCCCCCCEEHHCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHH GLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVDAVIIDKQFAEAVDIVFEIGR HHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QQQALLCESLATLSQGSLRPEFEL HHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCC APDDSVLIGSGDDGEPAGSAGRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTS CCCCCEEEECCCCCCCCCCCCCCCEEHHCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHH GLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVDAVIIDKQFAEAVDIVFEIGR HHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QQQALLCESLATLSQGSLRPEFEL HHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2243799; 1379743; 9278503; 8313894 [H]