Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is yigZ [H]

Identifier: 160873148

GI number: 160873148

Start: 27191

End: 27805

Strand: Direct

Name: yigZ [H]

Synonym: Sbal195_0022

Alternate gene names: 160873148

Gene position: 27191-27805 (Clockwise)

Preceding gene: 160873147

Following gene: 160873149

Centisome position: 0.51

GC content: 49.76

Gene sequence:

>615_bases
GTGCTCGAAAGTTATAGCGTTCCCTGTGAAGATATCGTGGTCGAAGAAGAGATAAAGCATAGCCGCTTTATCTCTTTTCT
GTTTCATTGCGATAGCTTTGATAAATTTAAGTTAGTACTCACTGACATAAAGCGTGACTATCCCGGCGCAAGCCATTATT
GCTCAGCTTTTGTGGCTGGCGCACCGGATGATAGCGTCTTGATTGGTTCGGGTGATGACGGCGAACCTGCCGGCAGTGCT
GGTCGCCCTATGTTAGCTGTGTTGCAAGGGGCGAATATCGGCGAAGTGGGCGCTGTTGTGGTGCGTTATTATGGCGGCAC
TAAGCTAGGCGTAGGTGGACTGGTTCGGGCTTATACGTCAGGCTTAAGGCAAGGTTTGGTTCAATTGCCGACGCGACTTA
AACAGTTACGTTATCCCGCCAAGTTGCATTGTGATTATGCGCAGCTGCGCGATGTGGAACATCTATTACAGCAAGTCGAT
GCCGTGATAATCGATAAGCAATTTGCTGAAGCGGTCGATATTGTGTTCGAGATAGGCAGGCAGCAACAGGCATTACTGTG
TGAGTCGCTGGCGACGCTCAGTCAGGGAAGTTTGAGGCCTGAGTTTGAGCTGTGA

Upstream 100 bases:

>100_bases
CATCGAAGATAACGTCATAGTGCATCAAGATAGAAACGAGAACATGACCCGTGAACTCGGTTTGACCGATTGATCATAGG
GTAAAGATTAGGGCGGATGT

Downstream 100 bases:

>100_bases
TGCCTGCGTAAATTATGCCAAAATAGCCCAAATGCTGAAAATACCTTTGCAGCCAATGGAATGATTGAACTCGCTTAATG
CAATATAAAACCATAATACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAGAPDDSVLIGSGDDGEPAGSA
GRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTSGLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVD
AVIIDKQFAEAVDIVFEIGRQQQALLCESLATLSQGSLRPEFEL

Sequences:

>Translated_204_residues
MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAGAPDDSVLIGSGDDGEPAGSA
GRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTSGLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVD
AVIIDKQFAEAVDIVFEIGRQQQALLCESLATLSQGSLRPEFEL
>Mature_204_residues
MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAGAPDDSVLIGSGDDGEPAGSA
GRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTSGLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVD
AVIIDKQFAEAVDIVFEIGRQQQALLCESLATLSQGSLRPEFEL

Specific function: Unknown

COG id: COG1739

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IMPACT family [H]

Homologues:

Organism=Escherichia coli, GI87082338, Length=198, Percent_Identity=45.959595959596, Blast_Score=157, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR020568
- InterPro:   IPR000640
- InterPro:   IPR015796
- InterPro:   IPR015269
- InterPro:   IPR020569
- InterPro:   IPR001498 [H]

Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]

EC number: NA

Molecular weight: Translated: 22322; Mature: 22322

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00910 UPF0029

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCC
APDDSVLIGSGDDGEPAGSAGRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTS
CCCCCEEEECCCCCCCCCCCCCCCEEHHCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHH
GLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVDAVIIDKQFAEAVDIVFEIGR
HHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQQALLCESLATLSQGSLRPEFEL
HHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLESYSVPCEDIVVEEEIKHSRFISFLFHCDSFDKFKLVLTDIKRDYPGASHYCSAFVAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCC
APDDSVLIGSGDDGEPAGSAGRPMLAVLQGANIGEVGAVVVRYYGGTKLGVGGLVRAYTS
CCCCCEEEECCCCCCCCCCCCCCCEEHHCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHH
GLRQGLVQLPTRLKQLRYPAKLHCDYAQLRDVEHLLQQVDAVIIDKQFAEAVDIVFEIGR
HHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQQALLCESLATLSQGSLRPEFEL
HHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2243799; 1379743; 9278503; 8313894 [H]