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The map label for this gene is yvdC

Identifier: 16080518

GI number: 16080518

Start: 3559632

End: 3559952

Strand: Direct

Name: yvdC

Synonym: BSU34650

Alternate gene names: 16080518

Gene position: 3559632-3559952 (Clockwise)

Preceding gene: 16080507

Following gene: 16080521

Centisome position: 84.44

GC content: 45.79

Gene sequence:

>321_bases
TTGCAGCTGGCTGATGCAGAAAAATGGATGAAAGAGTTTTACGAAAAAAGAGGCTGGACAGAATACGGACCTTTTATTCG
CGTCGGCTTTTTAATGGAGGAAGCCGGAGAACTGGCCCGGGCTGTCAGGGCGTATGAAATCGGCAGAGACCGGCCGGATG
AGAAAGAATCGTCACGCGCTGAGCAAAAACAAGAATTGATTGAAGAAATGGGAGATGTCATCGGAAATATCGCCATTCTT
GCTGATATGTATGGTGTCTCTTTAGAAGACGTCATGAAGGCCCACCAAGAAAAACTGACAAAACGATTTGAGCATGCATA
A

Upstream 100 bases:

>100_bases
CTATATATCGTGTTAAACATTCAAAAACACACTATATATTGTCCCATCTTCATGTGATAATATCAATATGAAATACATAA
AGAATGCAGGAGTGATGAGG

Downstream 100 bases:

>100_bases
AAAAGCGGCCGCGATGGCCGCTTTTTTTAACCTGTGATTTCATCATGGTGATCAAAGAAATGCTGCTTTCCTATTTTGTG
AAAAAGGCCTGTTTTATGCA

Product: pyrophosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MQLADAEKWMKEFYEKRGWTEYGPFIRVGFLMEEAGELARAVRAYEIGRDRPDEKESSRAEQKQELIEEMGDVIGNIAIL
ADMYGVSLEDVMKAHQEKLTKRFEHA

Sequences:

>Translated_106_residues
MQLADAEKWMKEFYEKRGWTEYGPFIRVGFLMEEAGELARAVRAYEIGRDRPDEKESSRAEQKQELIEEMGDVIGNIAIL
ADMYGVSLEDVMKAHQEKLTKRFEHA
>Mature_106_residues
MQLADAEKWMKEFYEKRGWTEYGPFIRVGFLMEEAGELARAVRAYEIGRDRPDEKESSRAEQKQELIEEMGDVIGNIAIL
ADMYGVSLEDVMKAHQEKLTKRFEHA

Specific function: Unknown

COG id: COG1694

COG function: function code R; Predicted pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVDC_BACSU (O32263)

Other databases:

- EMBL:   AL009126
- PIR:   C70033
- RefSeq:   NP_391345.1
- ProteinModelPortal:   O32263
- SMR:   O32263
- EnsemblBacteria:   EBBACT00000003613
- GeneID:   936515
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34650
- NMPDR:   fig|224308.1.peg.3471
- GenoList:   BSU34650
- GeneTree:   EBGT00050000001801
- HOGENOM:   HBG342270
- OMA:   CEEVGEL
- ProtClustDB:   CLSK887928
- BioCyc:   BSUB:BSU34650-MONOMER
- InterPro:   IPR011411
- InterPro:   IPR004518
- PIRSF:   PIRSF036521

Pfam domain/function: PF03819 MazG

EC number: NA

Molecular weight: Translated: 12343; Mature: 12343

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLADAEKWMKEFYEKRGWTEYGPFIRVGFLMEEAGELARAVRAYEIGRDRPDEKESSRA
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EQKQELIEEMGDVIGNIAILADMYGVSLEDVMKAHQEKLTKRFEHA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLADAEKWMKEFYEKRGWTEYGPFIRVGFLMEEAGELARAVRAYEIGRDRPDEKESSRA
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EQKQELIEEMGDVIGNIAILADMYGVSLEDVMKAHQEKLTKRFEHA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377