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The map label for this gene is yvbH

Identifier: 16080439

GI number: 16080439

Start: 3472626

End: 3473240

Strand: Direct

Name: yvbH

Synonym: BSU33860

Alternate gene names: 16080439

Gene position: 3472626-3473240 (Clockwise)

Preceding gene: 16080437

Following gene: 16080440

Centisome position: 82.38

GC content: 39.84

Gene sequence:

>615_bases
ATGTTCAAAAAAATTGCGGCAGATGCCTTGGGCTTATCTGATATCGGAAAAATTATCGAACCTCAGGACTATGACAAAAC
AGACGCAGATGACTATGTCATGCATGAAGATAATGAGAAAATTTATTTCTTGATTAAAACAAAAGCAGACGAGTATTGCT
TTACGAACCTGGCCCTGATCCATGTGGACGGCGAACGCGCCACTTCCTCAAAACGAACGTTGAAACGCTATCCTTATTCG
CAATATAAAATCTCTGACGTTTTTCTTGAAACTGCCGGAAAAGTGGATTTGGATGTTGAAATTAAGTTCAAGCTGGGCGG
TGAACAATTCGACATTGATGTCCACAAAGACCAGATTGAAAAGTTAAAAGACCTTTATAAAGCACTGCTTCGCATCGCTG
AAACAACCTATGAAAATGACATTTTAATCAATCAAGCGGAGCAAAGCTTAGATAAAGCAGTGACGATTCTTCACCATACC
CGCCCTGAGCACGTCAATATTGAAACGCAATACAAAGAGCTGACCGAATTCGGATTCACTTGGCTGACATCCGTTCGCTC
GCAGTATCATATTAAGGATTTTGGGGATGTATTTGAGAAATATATTAATAACTAG

Upstream 100 bases:

>100_bases
CCTTTTACCCGGAGGCGATTTCCCGGTAAACCTTTATAGCCTGTCAGAAACGCGCCATGCTACAATGAAGTGACAAATTG
AATAGGAAGGACGTATACAG

Downstream 100 bases:

>100_bases
ATAAAAAAAGACACAGCTGCTATCGTGCTCGTGTCTTTTTTTGTATGAATATTGATTACTTTACAACTTTTTTCTTTTAT
AATAAAACTATTAGTCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MFKKIAADALGLSDIGKIIEPQDYDKTDADDYVMHEDNEKIYFLIKTKADEYCFTNLALIHVDGERATSSKRTLKRYPYS
QYKISDVFLETAGKVDLDVEIKFKLGGEQFDIDVHKDQIEKLKDLYKALLRIAETTYENDILINQAEQSLDKAVTILHHT
RPEHVNIETQYKELTEFGFTWLTSVRSQYHIKDFGDVFEKYINN

Sequences:

>Translated_204_residues
MFKKIAADALGLSDIGKIIEPQDYDKTDADDYVMHEDNEKIYFLIKTKADEYCFTNLALIHVDGERATSSKRTLKRYPYS
QYKISDVFLETAGKVDLDVEIKFKLGGEQFDIDVHKDQIEKLKDLYKALLRIAETTYENDILINQAEQSLDKAVTILHHT
RPEHVNIETQYKELTEFGFTWLTSVRSQYHIKDFGDVFEKYINN
>Mature_204_residues
MFKKIAADALGLSDIGKIIEPQDYDKTDADDYVMHEDNEKIYFLIKTKADEYCFTNLALIHVDGERATSSKRTLKRYPYS
QYKISDVFLETAGKVDLDVEIKFKLGGEQFDIDVHKDQIEKLKDLYKALLRIAETTYENDILINQAEQSLDKAVTILHHT
RPEHVNIETQYKELTEFGFTWLTSVRSQYHIKDFGDVFEKYINN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVBH_BACSU (O32245)

Other databases:

- EMBL:   AL009126
- PIR:   G70029
- RefSeq:   NP_391266.1
- ProteinModelPortal:   O32245
- SMR:   O32245
- EnsemblBacteria:   EBBACT00000001790
- GeneID:   938639
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33860
- NMPDR:   fig|224308.1.peg.3392
- GenoList:   BSU33860
- GeneTree:   EBGT00050000003078
- HOGENOM:   HBG341325
- OMA:   KSKTDEY
- ProtClustDB:   CLSK873224
- BioCyc:   BSUB:BSU33860-MONOMER
- InterPro:   IPR012544
- InterPro:   IPR021722

Pfam domain/function: PF08000 DUF1696; PF11724 YvbH_ext

EC number: NA

Molecular weight: Translated: 23802; Mature: 23802

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKIAADALGLSDIGKIIEPQDYDKTDADDYVMHEDNEKIYFLIKTKADEYCFTNLALI
CCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCEEEEEEEEE
HVDGERATSSKRTLKRYPYSQYKISDVFLETAGKVDLDVEIKFKLGGEQFDIDVHKDQIE
EECCCCCCCHHHHHHHCCCCCEEHHHHHHHCCCCEEEEEEEEEEECCEEEEEECCHHHHH
KLKDLYKALLRIAETTYENDILINQAEQSLDKAVTILHHTRPEHVNIETQYKELTEFGFT
HHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHH
WLTSVRSQYHIKDFGDVFEKYINN
HHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MFKKIAADALGLSDIGKIIEPQDYDKTDADDYVMHEDNEKIYFLIKTKADEYCFTNLALI
CCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCEEEEEEEEE
HVDGERATSSKRTLKRYPYSQYKISDVFLETAGKVDLDVEIKFKLGGEQFDIDVHKDQIE
EECCCCCCCHHHHHHHCCCCCEEHHHHHHHCCCCEEEEEEEEEEECCEEEEEECCHHHHH
KLKDLYKALLRIAETTYENDILINQAEQSLDKAVTILHHTRPEHVNIETQYKELTEFGFT
HHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHH
WLTSVRSQYHIKDFGDVFEKYINN
HHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377