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The map label for this gene is yusO

Identifier: 16080339

GI number: 16080339

Start: 3374492

End: 3374959

Strand: Direct

Name: yusO

Synonym: BSU32870

Alternate gene names: 16080339

Gene position: 3374492-3374959 (Clockwise)

Preceding gene: 16080338

Following gene: 16080340

Centisome position: 80.05

GC content: 47.65

Gene sequence:

>468_bases
ATGAAGAGTGCGGATCAGTTAATGTCCGATATTCAATTATCGCTTCAGGCGCTCTTTCAAAAGATACAGCCTGAAATGCT
GGAAAGCATGGAGAAACAAGGTGTCACCCCAGCGCAGCTGTTTGTGCTGGCCAGCCTAAAGAAACACGGCAGCCTCAAAG
TTTCTGAAATTGCCGAGCGTATGGAGGTGAAGCCAAGCGCGGTGACGCTGATGGCAGATCGCCTTGAACAAAAAAATCTT
ATCGCCAGAACACACAACACAAAAGACAGGCGAGTGATTGATCTCAGTCTTACTGACGAAGGAGACATAAAGTTCGAGGA
GGTTTTGGCGGGCAGAAAAGCCATAATGGCGCGCTATCTTTCCTTTTTGACGGAGGAGGAAATGCTGCAGGCGGCGCATA
TTACAGCAAAACTCGCACAAGCAGCAGAAACGGATGAAAAGCAAAACATGAAAAGAGGAAACGGATGA

Upstream 100 bases:

>100_bases
ATCAGTTGACTTTTCATTTACGCTTATTTATATTTAATAAGCATTAACTATTTTGTCATTAAAATATATATACAGTGTAT
GTAACAGAGGGGAAATGAAT

Downstream 100 bases:

>100_bases
AAATGAGTAAAGAAGGCAAACAATCAAAACGAACGTTATTAATAACAGGCTTAATTATTGCCATGTTTTTTTCAGCCCTT
GACGGTACCATTGTCGGAAC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKSADQLMSDIQLSLQALFQKIQPEMLESMEKQGVTPAQLFVLASLKKHGSLKVSEIAERMEVKPSAVTLMADRLEQKNL
IARTHNTKDRRVIDLSLTDEGDIKFEEVLAGRKAIMARYLSFLTEEEMLQAAHITAKLAQAAETDEKQNMKRGNG

Sequences:

>Translated_155_residues
MKSADQLMSDIQLSLQALFQKIQPEMLESMEKQGVTPAQLFVLASLKKHGSLKVSEIAERMEVKPSAVTLMADRLEQKNL
IARTHNTKDRRVIDLSLTDEGDIKFEEVLAGRKAIMARYLSFLTEEEMLQAAHITAKLAQAAETDEKQNMKRGNG
>Mature_155_residues
MKSADQLMSDIQLSLQALFQKIQPEMLESMEKQGVTPAQLFVLASLKKHGSLKVSEIAERMEVKPSAVTLMADRLEQKNL
IARTHNTKDRRVIDLSLTDEGDIKFEEVLAGRKAIMARYLSFLTEEEMLQAAHITAKLAQAAETDEKQNMKRGNG

Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUSO_BACSU (O32181)

Other databases:

- EMBL:   AL009126
- PIR:   H70021
- RefSeq:   NP_391166.1
- PDB:   1S3J
- PDBsum:   1S3J
- ProteinModelPortal:   O32181
- SMR:   O32181
- EnsemblBacteria:   EBBACT00000002795
- GeneID:   935923
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32870
- NMPDR:   fig|224308.1.peg.3292
- GenoList:   BSU32870
- GeneTree:   EBGT00070000031942
- HOGENOM:   HBG338299
- OMA:   GRERLME
- ProtClustDB:   CLSK887847
- BioCyc:   BSUB:BSU32870-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000835
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00598
- SMART:   SM00347

Pfam domain/function: PF01047 MarR

EC number: NA

Molecular weight: Translated: 17400; Mature: 17400

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS01117 HTH_MARR_1; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSADQLMSDIQLSLQALFQKIQPEMLESMEKQGVTPAQLFVLASLKKHGSLKVSEIAER
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH
MEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFEEVLAGRKAIMARYL
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
SFLTEEEMLQAAHITAKLAQAAETDEKQNMKRGNG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC
>Mature Secondary Structure
MKSADQLMSDIQLSLQALFQKIQPEMLESMEKQGVTPAQLFVLASLKKHGSLKVSEIAER
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH
MEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFEEVLAGRKAIMARYL
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
SFLTEEEMLQAAHITAKLAQAAETDEKQNMKRGNG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377