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The map label for this gene is ytoA

Identifier: 16080104

GI number: 16080104

Start: 3123490

End: 3124005

Strand: Direct

Name: ytoA

Synonym: BSU30520

Alternate gene names: 16080104

Gene position: 3123490-3124005 (Clockwise)

Preceding gene: 16080101

Following gene: 255767698

Centisome position: 74.09

GC content: 46.51

Gene sequence:

>516_bases
ATGATCTACCCTTATAAGGAACACAAGCCAGATATCCACCCAACAGCCTTTATAGCTGATAATGCAACAATTACCGGTGA
TGTCGTGATCGGAGAACAGTCCAGCATTTGGTTTTCTGTTGTCATAAGGGGAGATGTTGCGCCGACCAGAATCGGAAACA
GAGTCAATATCCAAGATTTAAGCTGCCTCCATCAAAGCCCGAACAAGACGCTACTCATTGAAGATGACGCCACGATAGGC
CATCAGGTTACACTTCATAGCGCTGTTATCCGCAAGAACGCCTTAATCGGGATGGGCTCAATCATTTTAGACGGAGCCGA
AATTGGCGAAGGCGCTTTTATTGGTGCCGGCAGTCTTGTCCCGCCCGGAAAAATCATTCCGCCTGGCCATCTCGCCTTTG
GCCGCCCTGCAAAAGTCATCCGCCCTTTGACGGAAGAAGACCGAAAAGATATGCAAAGAATACGGTCAGAATATGTAGAA
AAGGGCCAATATTATAAATTTCTTCAACAAACATAA

Upstream 100 bases:

>100_bases
CGTGAATGATTACAATCACGGCAACAGGTCTGTCTGCTTTCCAGGTCCACATGATCTTCACCTCATACGAAATTTAAATA
GAGAAAGAAGGATGAATCTT

Downstream 100 bases:

>100_bases
GACCTGCTTCGTCTTACTTTACCATTTTTCAAATTATATTTGAAAGCAATAACCATCGTTAACCCGGACGTCATACAGTT
CGGGTTTCGATTTTTCCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MIYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSPNKTLLIEDDATIG
HQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVE
KGQYYKFLQQT

Sequences:

>Translated_171_residues
MIYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSPNKTLLIEDDATIG
HQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVE
KGQYYKFLQQT
>Mature_171_residues
MIYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSPNKTLLIEDDATIG
HQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVE
KGQYYKFLQQT

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family

Homologues:

Organism=Escherichia coli, GI87082240, Length=179, Percent_Identity=40.7821229050279, Blast_Score=128, Evalue=2e-31,
Organism=Escherichia coli, GI1787667, Length=157, Percent_Identity=33.1210191082803, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI87081681, Length=145, Percent_Identity=33.1034482758621, Blast_Score=90, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTOA_BACSU (O34696)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   H69997
- RefSeq:   NP_390930.1
- HSSP:   P43886
- ProteinModelPortal:   O34696
- SMR:   O34696
- EnsemblBacteria:   EBBACT00000002254
- GeneID:   937238
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30520
- NMPDR:   fig|224308.1.peg.3055
- GenoList:   BSU30520
- GeneTree:   EBGT00050000000558
- HOGENOM:   HBG621238
- OMA:   NNITIGH
- PhylomeDB:   O34696
- ProtClustDB:   CLSK873570
- BioCyc:   BSUB:BSU30520-MONOMER
- InterPro:   IPR011004

Pfam domain/function: SSF51161 Trimer_LpxA_like

EC number: NA

Molecular weight: Translated: 18783; Mature: 18783

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDL
CCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCHHCCCCCCHHHH
SCLHQSPNKTLLIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLV
HHHHCCCCCEEEEECCCCCCEEEHHHHHHHHHCCEEECCCEEEECCCCCCCEEECCCCCC
PPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVEKGQYYKFLQQT
CCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MIYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDL
CCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCHHCCCCCCHHHH
SCLHQSPNKTLLIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLV
HHHHCCCCCEEEEECCCCCCEEEHHHHHHHHHCCEEECCCEEEECCCCCCCEEECCCCCC
PPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVEKGQYYKFLQQT
CCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377