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The map label for this gene is msmE

Identifier: 16080079

GI number: 16080079

Start: 3097850

End: 3099130

Strand: Direct

Name: msmE

Synonym: BSU30270

Alternate gene names: 16080079

Gene position: 3097850-3099130 (Clockwise)

Preceding gene: 16080078

Following gene: 16080080

Centisome position: 73.49

GC content: 44.96

Gene sequence:

>1281_bases
ATGAAACACACTTTTGTTTTATTTCTCTCTCTTATTCTGCTTGTTCTGCCCGGGTGTTCAGCAGAGAAAAGCTCAGCAGA
TACCGCAAAAAAGACGTTAACCATTTATTCTACAATGTCAACCGACAGTGAAAGAGATACGTTCAGAAAACTAGCGGCAG
CATTCGAAAAGGAACACAGTGACATTCATGTCAGCCTTCATTTCCCAGGCAATGACTATGAAAATATGATGCGTGTCAGA
ATGGCGGCCAATGATTTGCCAGATCTATTCGATACACATGGCTGGGGGAAAATCAGGTACGGAGAATATACAGCGGATCT
CCGGGATATGAAATGGACTCAAGATCTTGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGAAAGGTGTATGCCT
ATCCAATCAATCAGGCAAAAGACGGTCTGGCGTATAATCGCAATATTTTAGACCGTTACGGCATTGCTCCGCCGGAAACC
ATGGATGACTTTATCAAAGCACTGAGAACGATTAAAGAAAAGAGCAAGGGAAGCATTGTTCCCTTCTGGTTTGCCGGATA
TGACAAAAGCTCATTCGCCCAATATTACGACCAATTCGCTACACCTCTTCTCATCACAGACCCTGCCCATAATGAAAAAA
AACAGCTCATCAACGGCACTTTTCAATGGAGTAAATTCACTTATTTATCAGAAATCCTCAAACAAATGCAGAAAGAAAAA
TTGATCAATATCGACGCCGTCACGGCAAAAAAATCACAGCTCATTGAATTAATGGCCCAAAACAAAATCGCCTTTACAAT
GCAAGGCGGCACACTCGGCCAAGACGTTGCCCAGATCAACCCGAACGTCAAGGTCGGCATTATCCCGACACCTGCCATCC
ATCCCGGTGATGACCCGATATGGATCGGCGGTGAACGCTACACCCTTGCAGCATGGAAAGATTCGCCTCAATTAAAAGAG
GCAAAAGATTTTATCGCATTTATGGCCCGCCCGGCCAATGCCAAACAAATGGCTGAAGCCACATCGCTTCCTTCAGGGCT
GACCAATGTGAAAGCTGATATTTTCTACGCAAACGATTATGAGTATTATCAAGATGTCAAAGTCGAGCCTTACTTCGACC
GGTTATACTTGCCAAACGGAATGTGGGATGTCCTGGGCACGGTTGGGCAGGAGCTCGCGGCTGACATTTTGGCGCCTCAA
GACATTTCGCAGAAGCTGGGAAGAGAATATAAACGACTCCGGGAGCAATCCGAAACACAGGGAGCTGAAAACAATGAGTG
A

Upstream 100 bases:

>100_bases
TGTCACCCTGCCTACAACATTAATCGTAAGACAAAGCTGCGGATGTACAGCAAAGGAGGTGACATAAGCAAAGATTCATC
ACGATGATAAGGAGGAAAAG

Downstream 100 bases:

>100_bases
GATCGCAAGGGACGTTCATGTGAAACAGGTTAAGCCAAAAAAGCAGTCCTCACTTTGGTGGATGTACATTCCTGCTTTGC
TCTCCGTTCTGGTCTTTATG

Product: multiple sugar-binding lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKHTFVLFLSLILLVLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTFRKLAAAFEKEHSDIHVSLHFPGNDYENMMRVR
MAANDLPDLFDTHGWGKIRYGEYTADLRDMKWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPET
MDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEK
LINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQINPNVKVGIIPTPAIHPGDDPIWIGGERYTLAAWKDSPQLKE
AKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDYEYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQ
DISQKLGREYKRLREQSETQGAENNE

Sequences:

>Translated_426_residues
MKHTFVLFLSLILLVLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTFRKLAAAFEKEHSDIHVSLHFPGNDYENMMRVR
MAANDLPDLFDTHGWGKIRYGEYTADLRDMKWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPET
MDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEK
LINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQINPNVKVGIIPTPAIHPGDDPIWIGGERYTLAAWKDSPQLKE
AKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDYEYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQ
DISQKLGREYKRLREQSETQGAENNE
>Mature_426_residues
MKHTFVLFLSLILLVLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTFRKLAAAFEKEHSDIHVSLHFPGNDYENMMRVR
MAANDLPDLFDTHGWGKIRYGEYTADLRDMKWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPET
MDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEK
LINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQINPNVKVGIIPTPAIHPGDDPIWIGGERYTLAAWKDSPQLKE
AKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDYEYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQ
DISQKLGREYKRLREQSETQGAENNE

Specific function: Probably part of an ABC transporter complex

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MSME_BACSU (O34335)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   H69660
- RefSeq:   NP_390905.1
- ProteinModelPortal:   O34335
- EnsemblBacteria:   EBBACT00000003123
- GeneID:   936693
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30270
- NMPDR:   fig|224308.1.peg.3030
- GenoList:   BSU30270
- GeneTree:   EBGT00050000001719
- HOGENOM:   HBG338241
- OMA:   KIRYGEY
- ProtClustDB:   CLSK873256
- BioCyc:   BSUB:BSU30270-MONOMER
- InterPro:   IPR006059

Pfam domain/function: PF01547 SBP_bac_1

EC number: NA

Molecular weight: Translated: 48238; Mature: 48238

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTFVLFLSLILLVLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTFRKLAAAFEKEHS
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCC
DIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGWGKIRYGEYTADLRDMKWTQDLDPNL
EEEEEEECCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCCCCHHHCCCCCCCCCCH
NSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPETMDDFIKALRTIKEKSKGSIV
HHHHHCCCCCEEEEECCCCCCCCHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE
PFWFAGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEK
EEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQINPNVKVGIIPTPAIHPGDDPI
CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCE
WIGGERYTLAAWKDSPQLKEAKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDY
EECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCC
EYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQDISQKLGREYKRLREQSETQ
HHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GAENNE
CCCCCC
>Mature Secondary Structure
MKHTFVLFLSLILLVLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTFRKLAAAFEKEHS
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCC
DIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGWGKIRYGEYTADLRDMKWTQDLDPNL
EEEEEEECCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCCCCHHHCCCCCCCCCCH
NSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPETMDDFIKALRTIKEKSKGSIV
HHHHHCCCCCEEEEECCCCCCCCHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE
PFWFAGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEK
EEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQINPNVKVGIIPTPAIHPGDDPI
CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCE
WIGGERYTLAAWKDSPQLKEAKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDY
EECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCC
EYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQDISQKLGREYKRLREQSETQ
HHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GAENNE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377