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The map label for this gene is ypuF

Identifier: 16079380

GI number: 16079380

Start: 2426867

End: 2427391

Strand: Direct

Name: ypuF

Synonym: BSU23230

Alternate gene names: 16079380

Gene position: 2426867-2427391 (Clockwise)

Preceding gene: 255767495

Following gene: 16079389

Centisome position: 57.57

GC content: 43.62

Gene sequence:

>525_bases
TTGTATCCGAAAGCTTATATAGATTATCTCGTTGAGTTTCATGCGACACGGGATTATTTTGAATGCCATGAAATATTAGA
AGAATATTGGAAGGAAGATCCGCCAAAGAAACGAAAACGCTATTGGGTGGGCTTTATTCAGCTTGCAGTGGCTTTATATC
ATCACAGAAGGCAGAATACAGCCGGGGCAAAAAGACTGATGGCGAACAGCATCCGGATTCTTCAAGCAGAACACCGGGCA
GTCGAAGACTTAGGGCTTGATCATGGCCGTTTGCTCGAACTTATGCAATCGGTTTACGAACAAATCGAAACCGTCTCTGC
CTATAAAAGCATTATACTGCCAATCAAAGATGAGAAACTGGAGGAAGCATGCAGGATCGAATGCAGGAAAAAAAAGTATA
CATGGGGGCAGCCCAGTGCACTCAGCAACATATTTCTTATCGACAAACACCGTTTGCGGGATCGGACTGACGTCATCCGT
GAACGTGAAAAAGAAATAGAACGCAGAAAAAAAAGCAGAGACTGA

Upstream 100 bases:

>100_bases
CTTCTGGTTTTCCTTTCTAAGAAGCACTAGAGGCCGGGCGTTCTTTTTTCCTTTTATCCCTTCTATGGTACACTAAAAGC
ACATTAAAGGAGGAAGCACC

Downstream 100 bases:

>100_bases
TCACAGCCTCTGCTTAATTATTGTATGAAATGTCTTGATCCTGCTGACCTTGACAACGTTCGAAAAAGCTCTGCGTTAAT
TCATTTGGAACCAGTACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFX6

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MYPKAYIDYLVEFHATRDYFECHEILEEYWKEDPPKKRKRYWVGFIQLAVALYHHRRQNTAGAKRLMANSIRILQAEHRA
VEDLGLDHGRLLELMQSVYEQIETVSAYKSIILPIKDEKLEEACRIECRKKKYTWGQPSALSNIFLIDKHRLRDRTDVIR
EREKEIERRKKSRD

Sequences:

>Translated_174_residues
MYPKAYIDYLVEFHATRDYFECHEILEEYWKEDPPKKRKRYWVGFIQLAVALYHHRRQNTAGAKRLMANSIRILQAEHRA
VEDLGLDHGRLLELMQSVYEQIETVSAYKSIILPIKDEKLEEACRIECRKKKYTWGQPSALSNIFLIDKHRLRDRTDVIR
EREKEIERRKKSRD
>Mature_174_residues
MYPKAYIDYLVEFHATRDYFECHEILEEYWKEDPPKKRKRYWVGFIQLAVALYHHRRQNTAGAKRLMANSIRILQAEHRA
VEDLGLDHGRLLELMQSVYEQIETVSAYKSIILPIKDEKLEEACRIECRKKKYTWGQPSALSNIFLIDKHRLRDRTDVIR
EREKEIERRKKSRD

Specific function: Unknown

COG id: COG1547

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPUF_BACSU (P17617)

Other databases:

- EMBL:   L09228
- EMBL:   X51510
- EMBL:   AL009126
- PIR:   S45548
- RefSeq:   NP_390204.1
- ProteinModelPortal:   P17617
- SMR:   P17617
- EnsemblBacteria:   EBBACT00000003994
- GeneID:   938952
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23230
- NMPDR:   fig|224308.1.peg.2327
- GenoList:   BSU23230
- GeneTree:   EBGT00050000002959
- HOGENOM:   HBG693807
- OMA:   NRDHYLV
- ProtClustDB:   CLSK2391276
- BioCyc:   BSUB:BSU23230-MONOMER
- InterPro:   IPR005500
- InterPro:   IPR023203

Pfam domain/function: PF03745 DUF309

EC number: NA

Molecular weight: Translated: 21021; Mature: 21021

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPKAYIDYLVEFHATRDYFECHEILEEYWKEDPPKKRKRYWVGFIQLAVALYHHRRQNT
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
AGAKRLMANSIRILQAEHRAVEDLGLDHGRLLELMQSVYEQIETVSAYKSIILPIKDEKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EEACRIECRKKKYTWGQPSALSNIFLIDKHRLRDRTDVIREREKEIERRKKSRD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYPKAYIDYLVEFHATRDYFECHEILEEYWKEDPPKKRKRYWVGFIQLAVALYHHRRQNT
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
AGAKRLMANSIRILQAEHRAVEDLGLDHGRLLELMQSVYEQIETVSAYKSIILPIKDEKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EEACRIECRKKKYTWGQPSALSNIFLIDKHRLRDRTDVIREREKEIERRKKSRD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377