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The map label for this gene is yokB

Identifier: 16079224

GI number: 16079224

Start: 2283858

End: 2284568

Strand: Reverse

Name: yokB

Synonym: BSU21650

Alternate gene names: 16079224

Gene position: 2284568-2283858 (Counterclockwise)

Preceding gene: 16079227

Following gene: 16079223

Centisome position: 54.19

GC content: 34.32

Gene sequence:

>711_bases
ATGAATATTCGCTTTTCAATGTTAGTTTGTGTATCTTTTATTTTCTTCACTGGTGGGTGTGCTGAAAGTAGTGCGAATTC
AAATGATGGTTCTAAAAATAAAAATGAGTCTAAAGAGGAATCCTCCGAAGAAGGTGTAAAGGAAAATGATAATAAACTCG
CGGATACTCCAAATATGGATGATTGTATTGAAGTGTACGGAAAAGAAGAGTGTGAACAGATCACTGAGTACTATAAAAGT
GAAGAAGGGCAAAAGGAGTTGGATGCAAGCGAAACAGATAAATATTCTGCAAAGTCTCAAACAAGTACTACACATAAAGA
TATCTATGAAAAAGTATCCTGGCTTGTTAAAGAAATGTTCGGAGTACCAGAAAGAACAATTCCAGCTGATTATGAAAAAA
GTTTGGTAGAAAAAAGGGATGATGGTTTATATTACATTCAATCTTCTTATGAAATAAAAGGAACTGGAAACCAAGCGGAT
ACTTACTATGAGTTTGAAATGTTGATGGATAATAAATACAACTTGATAGACGCATATTTTCCCGGCAGCACAGGAAGATA
TTCACGCCCTATGGTGTATGACAAACTTAAAAACATGGAAATACCAGAAGTAAAGAAAGTATCTCCAGAGGAAGAGAAAA
GGGAAGAGAAAAAACGTGAAGAAACAATGAAGAGTATTTATGGGGAAGAGCATATAAAGGACAATAAATAA

Upstream 100 bases:

>100_bases
ATTGAATTGATTGAAATTTTATGAAAAACCTTCTTGAACATGGGTTATAATTAGTTCATCTAAATTCATTGTAAATACTT
TATAAATCCAGGAGGGCTTT

Downstream 100 bases:

>100_bases
GTAGCAGTATAAATAAGTGTACGTTAAGTAGTTTAAATAAAATTCACATTTTATTTAAACCTGAAAGCTGCTTGAATACA
TCACAAATATAAAGTATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNIRFSMLVCVSFIFFTGGCAESSANSNDGSKNKNESKEESSEEGVKENDNKLADTPNMDDCIEVYGKEECEQITEYYKS
EEGQKELDASETDKYSAKSQTSTTHKDIYEKVSWLVKEMFGVPERTIPADYEKSLVEKRDDGLYYIQSSYEIKGTGNQAD
TYYEFEMLMDNKYNLIDAYFPGSTGRYSRPMVYDKLKNMEIPEVKKVSPEEEKREEKKREETMKSIYGEEHIKDNK

Sequences:

>Translated_236_residues
MNIRFSMLVCVSFIFFTGGCAESSANSNDGSKNKNESKEESSEEGVKENDNKLADTPNMDDCIEVYGKEECEQITEYYKS
EEGQKELDASETDKYSAKSQTSTTHKDIYEKVSWLVKEMFGVPERTIPADYEKSLVEKRDDGLYYIQSSYEIKGTGNQAD
TYYEFEMLMDNKYNLIDAYFPGSTGRYSRPMVYDKLKNMEIPEVKKVSPEEEKREEKKREETMKSIYGEEHIKDNK
>Mature_236_residues
MNIRFSMLVCVSFIFFTGGCAESSANSNDGSKNKNESKEESSEEGVKENDNKLADTPNMDDCIEVYGKEECEQITEYYKS
EEGQKELDASETDKYSAKSQTSTTHKDIYEKVSWLVKEMFGVPERTIPADYEKSLVEKRDDGLYYIQSSYEIKGTGNQAD
TYYEFEMLMDNKYNLIDAYFPGSTGRYSRPMVYDKLKNMEIPEVKKVSPEEEKREEKKREETMKSIYGEEHIKDNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOKB_BACSU (O32005)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390048.1
- ProteinModelPortal:   O32005
- EnsemblBacteria:   EBBACT00000002903
- GeneID:   939110
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21650
- NMPDR:   fig|224308.1.peg.2171
- GenoList:   BSU21650
- GeneTree:   EBGT00070000036419
- BioCyc:   BSUB:BSU21650-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27337; Mature: 27337

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRFSMLVCVSFIFFTGGCAESSANSNDGSKNKNESKEESSEEGVKENDNKLADTPNMD
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH
DCIEVYGKEECEQITEYYKSEEGQKELDASETDKYSAKSQTSTTHKDIYEKVSWLVKEMF
HHHHHHCHHHHHHHHHHHHCCCCHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
GVPERTIPADYEKSLVEKRDDGLYYIQSSYEIKGTGNQADTYYEFEMLMDNKYNLIDAYF
CCCCCCCCCHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCEEEHHHHHCCCCCEEEEEC
PGSTGRYSRPMVYDKLKNMEIPEVKKVSPEEEKREEKKREETMKSIYGEEHIKDNK
CCCCCCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIRFSMLVCVSFIFFTGGCAESSANSNDGSKNKNESKEESSEEGVKENDNKLADTPNMD
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH
DCIEVYGKEECEQITEYYKSEEGQKELDASETDKYSAKSQTSTTHKDIYEKVSWLVKEMF
HHHHHHCHHHHHHHHHHHHCCCCHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
GVPERTIPADYEKSLVEKRDDGLYYIQSSYEIKGTGNQADTYYEFEMLMDNKYNLIDAYF
CCCCCCCCCHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCEEEHHHHHCCCCCEEEEEC
PGSTGRYSRPMVYDKLKNMEIPEVKKVSPEEEKREEKKREETMKSIYGEEHIKDNK
CCCCCCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377