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The map label for this gene is yokC

Identifier: 16079223

GI number: 16079223

Start: 2283136

End: 2283651

Strand: Reverse

Name: yokC

Synonym: BSU21640

Alternate gene names: 16079223

Gene position: 2283651-2283136 (Counterclockwise)

Preceding gene: 16079224

Following gene: 16079219

Centisome position: 54.17

GC content: 32.75

Gene sequence:

>516_bases
ATGGACAATCGAAAAATGCTTCTTAGACAGAAGTTGAAAATAAACAAACAAAAAAGCCTCCGAGTAACATTGATGTCAAC
ACTGCCTCGTGATATGGCAACTACTATTGAGGATTGTAGTCTAATCACATCTCCTGAATTAGAAAGAATCCTAGATAAAG
TTCAGAAAAAATGGAACTTTGAGTTACATAAAAATGATTTTGCAATTAAATACAGTGAGCATAGAAAAGAATACAGTTGG
GAATATGAAGTGATCAATCATGTGCAACAAACTAAGCTTCCTGATGAACAAGTTTACTTATATTTAGGGATAGAGGATAG
CCCAATTTTTCTGATTAACGGTAACTGGATAATAGAGAACTTTAATTTTCTGTGGGAACAAATAAATAACAGCGATTTAT
GGATTATTGACTTTAATTTTAAATATGGGGTTCTAGTGTCTCGATATGGCGGATATTTAGATCATGATCCTAACCCAAAT
GAAATTATTTATGCAGTCACTGAATGGGGGATATAA

Upstream 100 bases:

>100_bases
GTATCATAGTTGGTGTATCAACCACTATAGGCCAGAGAGTTCCCTCACATACTCTCTGGCTTCTTTTATTAACCTTACAT
TATTATTTATGGAGGATAGT

Downstream 100 bases:

>100_bases
AATTGATTTATACAACAGAGAGTTGCAAAGGGCTTTGAATCTGCATTTTTGGTGGATTTGTAAAGTGATTTACTTAGTGA
AGGAAATTAAAGAATGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDNRKMLLRQKLKINKQKSLRVTLMSTLPRDMATTIEDCSLITSPELERILDKVQKKWNFELHKNDFAIKYSEHRKEYSW
EYEVINHVQQTKLPDEQVYLYLGIEDSPIFLINGNWIIENFNFLWEQINNSDLWIIDFNFKYGVLVSRYGGYLDHDPNPN
EIIYAVTEWGI

Sequences:

>Translated_171_residues
MDNRKMLLRQKLKINKQKSLRVTLMSTLPRDMATTIEDCSLITSPELERILDKVQKKWNFELHKNDFAIKYSEHRKEYSW
EYEVINHVQQTKLPDEQVYLYLGIEDSPIFLINGNWIIENFNFLWEQINNSDLWIIDFNFKYGVLVSRYGGYLDHDPNPN
EIIYAVTEWGI
>Mature_171_residues
MDNRKMLLRQKLKINKQKSLRVTLMSTLPRDMATTIEDCSLITSPELERILDKVQKKWNFELHKNDFAIKYSEHRKEYSW
EYEVINHVQQTKLPDEQVYLYLGIEDSPIFLINGNWIIENFNFLWEQINNSDLWIIDFNFKYGVLVSRYGGYLDHDPNPN
EIIYAVTEWGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOKC_BACSU (O32004)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390047.1
- EnsemblBacteria:   EBBACT00000002284
- GeneID:   939109
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21640
- NMPDR:   fig|224308.1.peg.2170
- GenoList:   BSU21640
- ProtClustDB:   CLSK887459
- BioCyc:   BSUB:BSU21640-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20522; Mature: 20522

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRKMLLRQKLKINKQKSLRVTLMSTLPRDMATTIEDCSLITSPELERILDKVQKKWNF
CCCHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
ELHKNDFAIKYSEHRKEYSWEYEVINHVQQTKLPDEQVYLYLGIEDSPIFLINGNWIIEN
EEECCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCEEEEC
FNFLWEQINNSDLWIIDFNFKYGVLVSRYGGYLDHDPNPNEIIYAVTEWGI
HHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MDNRKMLLRQKLKINKQKSLRVTLMSTLPRDMATTIEDCSLITSPELERILDKVQKKWNF
CCCHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
ELHKNDFAIKYSEHRKEYSWEYEVINHVQQTKLPDEQVYLYLGIEDSPIFLINGNWIIEN
EEECCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCEEEEC
FNFLWEQINNSDLWIIDFNFKYGVLVSRYGGYLDHDPNPNEIIYAVTEWGI
HHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377