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The map label for this gene is yomJ

Identifier: 16079193

GI number: 16079193

Start: 2248417

End: 2249100

Strand: Direct

Name: yomJ

Synonym: BSU21340

Alternate gene names: 16079193

Gene position: 2248417-2249100 (Clockwise)

Preceding gene: 16079192

Following gene: 255767473

Centisome position: 53.34

GC content: 34.65

Gene sequence:

>684_bases
ATGGGATATAAGTTTATGGCTTATGGTGGCTATTTTTTATTCTGTCTTTTCTTTTTGCTAATGGACGGCTGGAGAGGCAT
GGGAATTTGCTTAATAATTGTAGGTTTAGCCCTATTAGCACTTGAGCCCTATAAAATTAAAGCCCAAAAAAATATAGATA
AACTAAAAGAAAATGCGGAAACACTTAAGCACTTCGACGGTGGTTTTAATCCAGACAATTTCTTTAATACTTACAAAACT
AAAATTGCATTTAAGGAATCTGATTCCCTTGTGAAAATATATCAGCTTAATAAAGATGAACATATTGAAGAATACACAAT
CCCTTTTTCCAATGTTATAGAATCCGAAATTGCTTTAGACAATCAAATAATTTCTAAAGTATCAAAATCAGGAATCGTAG
CTGGTGGCCTGTTAGCTGGAGGAATTGGAGCTGCAATTGGAGGGTTGTCTGCCTCTTCAATACAAAATGAAATGGTCAAA
TCTGTCACGCTAAAGATTACTGTTGAAGACCTCGGTAAGCCTATCCATTATATCGATTTTCTCCCCACACAAGAAGTTGA
AGGGTATAATATTCAGGGGTATAAAAAAGATAGCAATGTCATTCAACAAGCACTTACGAATGCAGAATATTGGCATGGTG
TTATGGATGTAATTATTAAGAAAGCAAACAAAGTCGCTCAATAA

Upstream 100 bases:

>100_bases
AAAATCAGAAAAGAACTAATGATTTCACTTTCCATTTATACAGTTCTCCATGACTGGAAACAATGGTATAATGTAGGAAA
ATGATACCGGCGGTGGTTGA

Downstream 100 bases:

>100_bases
CTGAGTGGCTTTTTTCTTTGTCCTCTCCCCTACTGAAAGGAAGTGATTCTTACTTGAGTCAAAACCTCAAAATTATACTA
ACCCCGCAAGCTGATACCTC

Product: phage immunity protein; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MGYKFMAYGGYFLFCLFFLLMDGWRGMGICLIIVGLALLALEPYKIKAQKNIDKLKENAETLKHFDGGFNPDNFFNTYKT
KIAFKESDSLVKIYQLNKDEHIEEYTIPFSNVIESEIALDNQIISKVSKSGIVAGGLLAGGIGAAIGGLSASSIQNEMVK
SVTLKITVEDLGKPIHYIDFLPTQEVEGYNIQGYKKDSNVIQQALTNAEYWHGVMDVIIKKANKVAQ

Sequences:

>Translated_227_residues
MGYKFMAYGGYFLFCLFFLLMDGWRGMGICLIIVGLALLALEPYKIKAQKNIDKLKENAETLKHFDGGFNPDNFFNTYKT
KIAFKESDSLVKIYQLNKDEHIEEYTIPFSNVIESEIALDNQIISKVSKSGIVAGGLLAGGIGAAIGGLSASSIQNEMVK
SVTLKITVEDLGKPIHYIDFLPTQEVEGYNIQGYKKDSNVIQQALTNAEYWHGVMDVIIKKANKVAQ
>Mature_226_residues
GYKFMAYGGYFLFCLFFLLMDGWRGMGICLIIVGLALLALEPYKIKAQKNIDKLKENAETLKHFDGGFNPDNFFNTYKTK
IAFKESDSLVKIYQLNKDEHIEEYTIPFSNVIESEIALDNQIISKVSKSGIVAGGLLAGGIGAAIGGLSASSIQNEMVKS
VTLKITVEDLGKPIHYIDFLPTQEVEGYNIQGYKKDSNVIQQALTNAEYWHGVMDVIIKKANKVAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOMJ_BACSU (O31975)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390017.1
- ProteinModelPortal:   O31975
- EnsemblBacteria:   EBBACT00000003411
- GeneID:   939133
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21340
- NMPDR:   fig|224308.1.peg.2140
- GenoList:   BSU21340
- BioCyc:   BSUB:BSU21340-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25236; Mature: 25104

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xecbfaa4)-; HASH(0x100c7f88)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYKFMAYGGYFLFCLFFLLMDGWRGMGICLIIVGLALLALEPYKIKAQKNIDKLKENAE
CCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
TLKHFDGGFNPDNFFNTYKTKIAFKESDSLVKIYQLNKDEHIEEYTIPFSNVIESEIALD
HHHHHCCCCCCCHHHHHHHHEEEEECCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHH
NQIISKVSKSGIVAGGLLAGGIGAAIGGLSASSIQNEMVKSVTLKITVEDLGKPIHYIDF
HHHHHHHHHCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHCCCEEEHCC
LPTQEVEGYNIQGYKKDSNVIQQALTNAEYWHGVMDVIIKKANKVAQ
CCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
GYKFMAYGGYFLFCLFFLLMDGWRGMGICLIIVGLALLALEPYKIKAQKNIDKLKENAE
CEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
TLKHFDGGFNPDNFFNTYKTKIAFKESDSLVKIYQLNKDEHIEEYTIPFSNVIESEIALD
HHHHHCCCCCCCHHHHHHHHEEEEECCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHH
NQIISKVSKSGIVAGGLLAGGIGAAIGGLSASSIQNEMVKSVTLKITVEDLGKPIHYIDF
HHHHHHHHHCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHCCCEEEHCC
LPTQEVEGYNIQGYKKDSNVIQQALTNAEYWHGVMDVIIKKANKVAQ
CCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377