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The map label for this gene is yfnA

Identifier: 16077801

GI number: 16077801

Start: 805456

End: 806841

Strand: Reverse

Name: yfnA

Synonym: BSU07340

Alternate gene names: 16077801

Gene position: 806841-805456 (Counterclockwise)

Preceding gene: 255767185

Following gene: 16077800

Centisome position: 19.14

GC content: 49.13

Gene sequence:

>1386_bases
ATGAGTTCATTATTTAGAAAAAAACCGCTTGAAACATTGAGTGCGCAGAGCAAGTCAAAAAGCCTTGCCCGTACGTTAAG
CGCATTTGATTTAACCTTGCTCGGTATCGGTTGTGTCATCGGTACAGGGATTTTTGTCATTACAGGAACAGTGGCAGCGA
CCGGTGCAGGTCCCGCCCTCATCATATCGTTTATTTTAGCGGGGCTCGCCTGTGCGCTGGCTGCTTTCTGTTATGCTGAG
TTTTCGTCTTCCATTCCGATTTCGGGAAGCGTGTACTCATACTCATACGTGACACTTGGAGAGCTGCTCGCCTTTTTGAT
CGGATGGGATCTCATGCTTGAATATGTCATTGCACTGTCGGCGGTTGCCACCGGCTGGTCTTCATACTTTCAATCACTGC
TTGCCGGCTTCAATCTTCATATTCCGGCTGCACTGACAGGAGCGCCGGGAAGCATGGCGGGCGCCGTATTTAACCTTCCG
GCTGCGGTGATCATTCTCCTCATCACTGCGATTGTCAGCAGAGGCGTCAAGGAAAGCACACGCTTTAACAACGTCATCGT
ACTGATGAAAATCGCGATCATATTATTGTTCATTATTGTCGGCATCGGCTATGTGAAACCGGATAACTGGTCTCCTTTTA
TGCCATTCGGGATGAAAGGCGTCATACTTAGCGCTGCCACTGTATTCTTCGCGTACCTTGGGTTTGACGCGGTTTCTAAC
GCATCAGAGGAAGTGAAAAATCCGCAAAAAAACATGCCCGTCGGCATTATTTCAGCTCTAGCCGTCTGTACGGTTCTGTA
CATCGCGGTATCGCTTGTGCTGACAGGCATGATGCCTTATGCCAAATTGAATGTCGGAGATCCTGTATCCTTTGCGCTGA
AATTCGTCGGACAGGACGCTGTTGCCGGAATTATTTCTGTCGGTGCGATTATCGGGATTACGACGGTGATGCTCGCTTTG
CTGTACGCACAGGTCCGCTTGACATTTGCCATGAGCAGAGACGGCCTTCTGCCTGGATTGTTCGCAAAGGTTCATCCGTC
ATTTAAAACCCCGTTCCGCAACACATGGCTGACAGGGATCGTTGCAGCGGGAATCGCCGGCTTTATTAACCTCGGAACGC
TGGCCCATCTGGTGAACATGGGAACACTTGCCGCGTTTACGGTCATTTCCATTGCTGTCATTGTGTTAAGAAAGAAACAT
CCTGAAATCAAAGCGTCCTTCAGAGTGCCATTCGTTCCGGTTGTGCCGATTATCAGCGCAGGCATCTGCCTTTGGTTCAT
GTACAGCCTTCCCGGCGTCACATGGCTTTCATTTGTCATCTGGATCGCTGTCGGAACGCTGGTTTACTTCCTATATTCGA
GAAAACACAGCTTATTAAACAAATAA

Upstream 100 bases:

>100_bases
AAAAATATTTTATTGACTACGTCAAATTTCGACAATATAATACAACAAGAACTGCATATAATGATTAGAATATTTTGAAT
ATTTCTAGGAGGAACTTTTG

Downstream 100 bases:

>100_bases
TCTCTTTTCAGCCGGCGGTGCCTCACCCGCCGGCTTTTTCCTTTTTTTATGTGCTATACTTTGAATACATATGAGAAAGG
GAGACACACAGATGAAGCGA

Product: metabolite permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MSSLFRKKPLETLSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPALIISFILAGLACALAAFCYAE
FSSSIPISGSVYSYSYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAALTGAPGSMAGAVFNLP
AAVIILLITAIVSRGVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPFGMKGVILSAATVFFAYLGFDAVSN
ASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLAL
LYAQVRLTFAMSRDGLLPGLFAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKH
PEIKASFRVPFVPVVPIISAGICLWFMYSLPGVTWLSFVIWIAVGTLVYFLYSRKHSLLNK

Sequences:

>Translated_461_residues
MSSLFRKKPLETLSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPALIISFILAGLACALAAFCYAE
FSSSIPISGSVYSYSYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAALTGAPGSMAGAVFNLP
AAVIILLITAIVSRGVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPFGMKGVILSAATVFFAYLGFDAVSN
ASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLAL
LYAQVRLTFAMSRDGLLPGLFAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKH
PEIKASFRVPFVPVVPIISAGICLWFMYSLPGVTWLSFVIWIAVGTLVYFLYSRKHSLLNK
>Mature_460_residues
SSLFRKKPLETLSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPALIISFILAGLACALAAFCYAEF
SSSIPISGSVYSYSYVTLGELLAFLIGWDLMLEYVIALSAVATGWSSYFQSLLAGFNLHIPAALTGAPGSMAGAVFNLPA
AVIILLITAIVSRGVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPFGMKGVILSAATVFFAYLGFDAVSNA
SEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLALL
YAQVRLTFAMSRDGLLPGLFAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKHP
EIKASFRVPFVPVVPIISAGICLWFMYSLPGVTWLSFVIWIAVGTLVYFLYSRKHSLLNK

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily

Homologues:

Organism=Homo sapiens, GI4507047, Length=439, Percent_Identity=36.9020501138952, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI114326544, Length=465, Percent_Identity=34.8387096774194, Blast_Score=258, Evalue=1e-68,
Organism=Homo sapiens, GI114326550, Length=465, Percent_Identity=34.8387096774194, Blast_Score=258, Evalue=1e-68,
Organism=Homo sapiens, GI258614005, Length=431, Percent_Identity=36.1948955916473, Blast_Score=251, Evalue=8e-67,
Organism=Homo sapiens, GI258614003, Length=431, Percent_Identity=36.1948955916473, Blast_Score=251, Evalue=9e-67,
Organism=Homo sapiens, GI181337167, Length=415, Percent_Identity=36.3855421686747, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI258645169, Length=431, Percent_Identity=35.9628770301624, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI110347453, Length=401, Percent_Identity=39.1521197007481, Blast_Score=248, Evalue=7e-66,
Organism=Homo sapiens, GI115648063, Length=348, Percent_Identity=26.4367816091954, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI115648022, Length=348, Percent_Identity=26.4367816091954, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI187423910, Length=472, Percent_Identity=26.4830508474576, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI7657591, Length=472, Percent_Identity=26.4830508474576, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI186910308, Length=437, Percent_Identity=25.1716247139588, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI186910306, Length=437, Percent_Identity=25.1716247139588, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI186910304, Length=437, Percent_Identity=25.1716247139588, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI71979932, Length=411, Percent_Identity=24.5742092457421, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI33286428, Length=431, Percent_Identity=26.9141531322506, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI7657683, Length=426, Percent_Identity=25.5868544600939, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI9790235, Length=300, Percent_Identity=25.3333333333333, Blast_Score=77, Evalue=5e-14,
Organism=Escherichia coli, GI87081869, Length=444, Percent_Identity=26.8018018018018, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87082250, Length=467, Percent_Identity=27.4089935760171, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI87081708, Length=438, Percent_Identity=23.972602739726, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1788480, Length=446, Percent_Identity=25.5605381165919, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87082023, Length=459, Percent_Identity=25.9259259259259, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1786302, Length=436, Percent_Identity=24.0825688073394, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1786694, Length=425, Percent_Identity=25.4117647058824, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI87081915, Length=433, Percent_Identity=24.7113163972286, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1789017, Length=360, Percent_Identity=23.8888888888889, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786789, Length=342, Percent_Identity=23.6842105263158, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786602, Length=477, Percent_Identity=24.1090146750524, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790653, Length=419, Percent_Identity=21.9570405727924, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI2367353, Length=354, Percent_Identity=24.2937853107345, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI48994972, Length=334, Percent_Identity=21.8562874251497, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=405, Percent_Identity=38.0246913580247, Blast_Score=268, Evalue=4e-72,
Organism=Caenorhabditis elegans, GI17533459, Length=415, Percent_Identity=35.1807228915663, Blast_Score=237, Evalue=9e-63,
Organism=Caenorhabditis elegans, GI17531343, Length=415, Percent_Identity=37.1084337349398, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17540018, Length=431, Percent_Identity=25.9860788863109, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17568033, Length=361, Percent_Identity=26.3157894736842, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17537453, Length=372, Percent_Identity=25, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI32566699, Length=314, Percent_Identity=26.4331210191083, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193208714, Length=423, Percent_Identity=25.2955082742317, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI32566695, Length=445, Percent_Identity=25.1685393258427, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71982612, Length=396, Percent_Identity=23.4848484848485, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71982608, Length=396, Percent_Identity=23.4848484848485, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71995388, Length=406, Percent_Identity=22.1674876847291, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71995382, Length=406, Percent_Identity=22.1674876847291, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71993915, Length=400, Percent_Identity=23.25, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24666159, Length=421, Percent_Identity=38.0047505938242, Blast_Score=298, Evalue=4e-81,
Organism=Drosophila melanogaster, GI221512776, Length=421, Percent_Identity=38.0047505938242, Blast_Score=298, Evalue=4e-81,
Organism=Drosophila melanogaster, GI24667468, Length=401, Percent_Identity=40.1496259351621, Blast_Score=287, Evalue=1e-77,
Organism=Drosophila melanogaster, GI24668806, Length=418, Percent_Identity=36.8421052631579, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI21356285, Length=418, Percent_Identity=36.8421052631579, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI24668802, Length=418, Percent_Identity=36.8421052631579, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI281366235, Length=409, Percent_Identity=36.4303178484108, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI116007820, Length=409, Percent_Identity=36.4303178484108, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI116007818, Length=409, Percent_Identity=36.4303178484108, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI85725152, Length=409, Percent_Identity=36.4303178484108, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI161077963, Length=396, Percent_Identity=36.1111111111111, Blast_Score=228, Evalue=5e-60,
Organism=Drosophila melanogaster, GI21357367, Length=360, Percent_Identity=25.2777777777778, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI221331183, Length=438, Percent_Identity=23.972602739726, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17647653, Length=438, Percent_Identity=23.972602739726, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24664379, Length=438, Percent_Identity=23.972602739726, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24651635, Length=405, Percent_Identity=26.1728395061728, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24651633, Length=405, Percent_Identity=26.1728395061728, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI45550968, Length=405, Percent_Identity=23.4567901234568, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI19921172, Length=405, Percent_Identity=23.4567901234568, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24641993, Length=415, Percent_Identity=26.0240963855422, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641995, Length=415, Percent_Identity=26.0240963855422, Blast_Score=77, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFNA_BACSU (Q797A7)

Other databases:

- EMBL:   D86418
- EMBL:   AL009126
- PIR:   D69814
- RefSeq:   NP_388615.1
- ProteinModelPortal:   Q797A7
- SMR:   Q797A7
- EnsemblBacteria:   EBBACT00000002331
- GeneID:   936098
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU07340
- NMPDR:   fig|224308.1.peg.734
- GenoList:   BSU07340
- GeneTree:   EBGT00070000031899
- HOGENOM:   HBG727793
- OMA:   MLEYVIA
- PhylomeDB:   Q797A7
- ProtClustDB:   CLSK886844
- BioCyc:   BSUB:BSU07340-MONOMER
- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606
- PANTHER:   PTHR11785
- PANTHER:   PTHR11785:SF53
- PIRSF:   PIRSF006060

Pfam domain/function: PF00324 AA_permease

EC number: NA

Molecular weight: Translated: 48906; Mature: 48775

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc5b640c)-; HASH(0xd830904)-; HASH(0xda8ad48)-; HASH(0xd1d4768)-; HASH(0xd741f14)-; HASH(0xb4b02b0)-; HASH(0xda97334)-; HASH(0xd74a400)-; HASH(0xb34f77c)-; HASH(0xb571e10)-; HASH(0xd8830e4)-; HASH(0xc40c084)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLFRKKPLETLSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPAL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECHHHCCCCCHHH
IISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGELLAFLIGWDLMLEYVIALS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
AVATGWSSYFQSLLAGFNLHIPAALTGAPGSMAGAVFNLPAAVIILLITAIVSRGVKEST
HHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RFNNVIVLMKIAIILLFIIVGIGYVKPDNWSPFMPFGMKGVILSAATVFFAYLGFDAVSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
ASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGDPVSFALKFVGQDA
CHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHH
VAGIISVGAIIGITTVMLALLYAQVRLTFAMSRDGLLPGLFAKVHPSFKTPFRNTWLTGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHH
VAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRKKHPEIKASFRVPFVPVVPIISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHH
GICLWFMYSLPGVTWLSFVIWIAVGTLVYFLYSRKHSLLNK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SSLFRKKPLETLSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPAL
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECHHHCCCCCHHH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HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377