Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159901104
Identifier: 159901104
GI number: 159901104
Start: 5874165
End: 5874440
Strand: Direct
Name: 159901104
Synonym: Haur_4592
Alternate gene names: NA
Gene position: 5874165-5874440 (Clockwise)
Preceding gene: 159901103
Following gene: 159901105
Centisome position: 92.56
GC content: 46.74
Gene sequence:
>276_bases ATGAGTTCCGAATCATCTGTTGAATGTACTCGCTGTAAACGACAGCTTAAAGCCGATGAGGTGCGCATGGCGCAACCGTT GATCACCTTCAAAGAGTTGGTGCGGGCTGCAATCAAAACTCCCTCACTGCTGAACGCAAAATTGGAGGATGTTCCCTATT GTCCAGAATGTCGGGGCATTATTGCCAAACAACGCCAAACTGAGCAACTCAAATTTTTAGCAGTGGTCGTCGCGGTGTTA TTAATCCTGATTGTATTGGTTGTCGTTGTGCTCTAG
Upstream 100 bases:
>100_bases CGTGCGCATGTGCTACGCTACCAGCATGGATAATATCGAAACTGCCTTAGAACGAATTGAGCGCTACGTTCGTTCATTGT AAATTTAATGAGGATGCGCC
Downstream 100 bases:
>100_bases CTGCATTCATGCCTGGGGGTTAAATGTTTAGGACAAAATGATGCTTTTATCTGTGTTAATTCCTTGCTACAATGAAGCAG CAACAATTGCAAACATGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSSESSVECTRCKRQLKADEVRMAQPLITFKELVRAAIKTPSLLNAKLEDVPYCPECRGIIAKQRQTEQLKFLAVVVAVL LILIVLVVVVL
Sequences:
>Translated_91_residues MSSESSVECTRCKRQLKADEVRMAQPLITFKELVRAAIKTPSLLNAKLEDVPYCPECRGIIAKQRQTEQLKFLAVVVAVL LILIVLVVVVL >Mature_90_residues SSESSVECTRCKRQLKADEVRMAQPLITFKELVRAAIKTPSLLNAKLEDVPYCPECRGIIAKQRQTEQLKFLAVVVAVLL ILIVLVVVVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10166; Mature: 10035
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSESSVECTRCKRQLKADEVRMAQPLITFKELVRAAIKTPSLLNAKLEDVPYCPECRGI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCCHHHHH IAKQRQTEQLKFLAVVVAVLLILIVLVVVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SSESSVECTRCKRQLKADEVRMAQPLITFKELVRAAIKTPSLLNAKLEDVPYCPECRGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCCHHHHH IAKQRQTEQLKFLAVVVAVLLILIVLVVVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA