Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159901068
Identifier: 159901068
GI number: 159901068
Start: 5833232
End: 5833642
Strand: Direct
Name: 159901068
Synonym: Haur_4556
Alternate gene names: NA
Gene position: 5833232-5833642 (Clockwise)
Preceding gene: 159901067
Following gene: 159901071
Centisome position: 91.91
GC content: 46.96
Gene sequence:
>411_bases ATGATCCTATATCGACCTGTTGGGTTAGAAGAACTAACATTAATTGCGCAAGCGGGCTATCGTTCATTCCCAGCACAATT GGCCGAGCCACCAATTGCTTATCCAATCCTCAACCTTGAGTATGCCAGCCATGTTGCTGAATCAGTCAAAACCAAGGATG CTGAGGCTGGTTATGCTGGATTTGTGGCCGAATTTGAAATAAGCGAACAATATGCTCGCCAATTTGCGGTTAAATCGGTG GGCATTCGTCGCCGTCATCGTGAACTTTTAGTGCCAATCGAAGAATTTCACAATTTCAACACCCGCATTCTTGGCCATAT CAAGGTCATTGCCTCGTTCTATGGCAAGCAATTTCGCGGGATGGTCAACCCCGTAACCGCCCTCCCCACCTTCATCTCAC CTGTTTTGTAA
Upstream 100 bases:
>100_bases TAAATAGATGTGGAATAATTTGAGTGTGATGTGACCTTTAAACGATACGTTATAGCTTCTTACAATCACACCTTGGTGGC ACAAGGGAAAGGACAAGCAG
Downstream 100 bases:
>100_bases CTAAACCAAGGCTTCTGATCAACTGATCAGGAGCCTTGGTTTATTCGTGAAAAGCACTCACTGGCAGGAAATCAAGGTAC TTTTTAACGGCAAGATCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MILYRPVGLEELTLIAQAGYRSFPAQLAEPPIAYPILNLEYASHVAESVKTKDAEAGYAGFVAEFEISEQYARQFAVKSV GIRRRHRELLVPIEEFHNFNTRILGHIKVIASFYGKQFRGMVNPVTALPTFISPVL
Sequences:
>Translated_136_residues MILYRPVGLEELTLIAQAGYRSFPAQLAEPPIAYPILNLEYASHVAESVKTKDAEAGYAGFVAEFEISEQYARQFAVKSV GIRRRHRELLVPIEEFHNFNTRILGHIKVIASFYGKQFRGMVNPVTALPTFISPVL >Mature_136_residues MILYRPVGLEELTLIAQAGYRSFPAQLAEPPIAYPILNLEYASHVAESVKTKDAEAGYAGFVAEFEISEQYARQFAVKSV GIRRRHRELLVPIEEFHNFNTRILGHIKVIASFYGKQFRGMVNPVTALPTFISPVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15309; Mature: 15309
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILYRPVGLEELTLIAQAGYRSFPAQLAEPPIAYPILNLEYASHVAESVKTKDAEAGYAG CEEECCCCHHHHHHHHHCCCCCCCHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCHH FVAEFEISEQYARQFAVKSVGIRRRHRELLVPIEEFHNFNTRILGHIKVIASFYGKQFRG HHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHC MVNPVTALPTFISPVL HHCHHHHHHHHHHCCC >Mature Secondary Structure MILYRPVGLEELTLIAQAGYRSFPAQLAEPPIAYPILNLEYASHVAESVKTKDAEAGYAG CEEECCCCHHHHHHHHHCCCCCCCHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCHH FVAEFEISEQYARQFAVKSVGIRRRHRELLVPIEEFHNFNTRILGHIKVIASFYGKQFRG HHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHC MVNPVTALPTFISPVL HHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA