Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159900994
Identifier: 159900994
GI number: 159900994
Start: 5737159
End: 5737689
Strand: Direct
Name: 159900994
Synonym: Haur_4481
Alternate gene names: NA
Gene position: 5737159-5737689 (Clockwise)
Preceding gene: 159900993
Following gene: 159900995
Centisome position: 90.4
GC content: 37.29
Gene sequence:
>531_bases ATGCGGAGCTTTACAGAAAGAATCCTGGCAATAGCAACTGGATTTTTAATTTTTGCATCATATTCGGTAGAATTTACCAA AACTGATCAATCAGCAACAAGCTACTTGATAACCTATAATAATGCAATCAATTTCCCAATTATTATTGTTTTATATCTGT TAACTGCTGCTTTGTTTTTTAAGCTAATTCCATGGCCTAAGATCAAGATGTTAGCAATTTTCGCCCTAACACTAGGAAAT TTAGTATTTTTCCCGCGCTTAATTCGCCAAGAATTTCGGCTTAATGATACGCACTTAACAATTGTTTCATCGGGGTTTGT TGAAGCCTATCCATGGGCAGATCTCCAATCAATCATTATTTACAAACAAAAATCAGGCCGATCGACGATCACCTACTGGA AAATGACCGATACCAATGGCAATGTGATCGATGATGAGCTAGAAAATTCATTGATGGCGCAAAGTCGTGAAATTACTGAA CAATTTGCCACCAGCCACGGCGTAACATTCGATAATCAGCTTCATCCATAA
Upstream 100 bases:
>100_bases ATGTGCTTTGGCCTGAGCAAATTATTCAGCACAAACGCGATTTACTGATGATCAGCCACGATGCTGATAGTATCTTTTTA ATTCGACAGGATCAATAATT
Downstream 100 bases:
>100_bases GCAGCATAAATAACGAATCATTTATTGAAGGAGTAGCACATGCGGCAGATTTGGCGAGGGGTTGGCTTAGGTTTGGTCTT ATTGAGCTTCGTTGGGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MRSFTERILAIATGFLIFASYSVEFTKTDQSATSYLITYNNAINFPIIIVLYLLTAALFFKLIPWPKIKMLAIFALTLGN LVFFPRLIRQEFRLNDTHLTIVSSGFVEAYPWADLQSIIIYKQKSGRSTITYWKMTDTNGNVIDDELENSLMAQSREITE QFATSHGVTFDNQLHP
Sequences:
>Translated_176_residues MRSFTERILAIATGFLIFASYSVEFTKTDQSATSYLITYNNAINFPIIIVLYLLTAALFFKLIPWPKIKMLAIFALTLGN LVFFPRLIRQEFRLNDTHLTIVSSGFVEAYPWADLQSIIIYKQKSGRSTITYWKMTDTNGNVIDDELENSLMAQSREITE QFATSHGVTFDNQLHP >Mature_176_residues MRSFTERILAIATGFLIFASYSVEFTKTDQSATSYLITYNNAINFPIIIVLYLLTAALFFKLIPWPKIKMLAIFALTLGN LVFFPRLIRQEFRLNDTHLTIVSSGFVEAYPWADLQSIIIYKQKSGRSTITYWKMTDTNGNVIDDELENSLMAQSREITE QFATSHGVTFDNQLHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20163; Mature: 20163
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFTERILAIATGFLIFASYSVEFTKTDQSATSYLITYNNAINFPIIIVLYLLTAALFF CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH KLIPWPKIKMLAIFALTLGNLVFFPRLIRQEFRLNDTHLTIVSSGFVEAYPWADLQSIII HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCEEEEE YKQKSGRSTITYWKMTDTNGNVIDDELENSLMAQSREITEQFATSHGVTFDNQLHP EEECCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRSFTERILAIATGFLIFASYSVEFTKTDQSATSYLITYNNAINFPIIIVLYLLTAALFF CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH KLIPWPKIKMLAIFALTLGNLVFFPRLIRQEFRLNDTHLTIVSSGFVEAYPWADLQSIII HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCEEEEE YKQKSGRSTITYWKMTDTNGNVIDDELENSLMAQSREITEQFATSHGVTFDNQLHP EEECCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA