Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159900993
Identifier: 159900993
GI number: 159900993
Start: 5736674
End: 5737156
Strand: Direct
Name: 159900993
Synonym: Haur_4480
Alternate gene names: NA
Gene position: 5736674-5737156 (Clockwise)
Preceding gene: 159900992
Following gene: 159900994
Centisome position: 90.39
GC content: 42.86
Gene sequence:
>483_bases GTGTTTACGAAATTCTTCGATTGGATTTTAGGGCGAAATATACCAGTTGAACCATGGCATTTGCAAAGGCTGAGTTGGCT GATTACAGAATATCAGCTTGATGGCGAGTTAGCTGAATCCGCAACGAATTGGCTTTCAGTGGGCGATACCGCTGAATTGC TTGACCAAATGGTCAACGAGCAGGGTTTAATCGTGTTTTGCTACCATAATCAAGCATTTGCTCAAGCTGATGGCATCTGG TTTGAGATATTTTTGGATTATGATTTGGTGATTATTCTGGCCAACGATGCCGAAACGTTATTTACACCATTGGCTCAGCA ATATCGCAAGCTTAGCACGAGCAGCATTCGCGATAATCGGGCGAATGATTTGCTGGGAACCAACGATGTGCTTTGGCCTG AGCAAATTATTCAGCACAAACGCGATTTACTGATGATCAGCCACGATGCTGATAGTATCTTTTTAATTCGACAGGATCAA TAA
Upstream 100 bases:
>100_bases TTTCTTCTTTGTTTCCAAGCAATTCCAAGCTTGGCTCGATGCTTTTAGCGCAGCAGGCATCAAAATTATACCCAACGCAT AGTTAGCAAAGGAACAATAG
Downstream 100 bases:
>100_bases TTATGCGGAGCTTTACAGAAAGAATCCTGGCAATAGCAACTGGATTTTTAATTTTTGCATCATATTCGGTAGAATTTACC AAAACTGATCAATCAGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MFTKFFDWILGRNIPVEPWHLQRLSWLITEYQLDGELAESATNWLSVGDTAELLDQMVNEQGLIVFCYHNQAFAQADGIW FEIFLDYDLVIILANDAETLFTPLAQQYRKLSTSSIRDNRANDLLGTNDVLWPEQIIQHKRDLLMISHDADSIFLIRQDQ
Sequences:
>Translated_160_residues MFTKFFDWILGRNIPVEPWHLQRLSWLITEYQLDGELAESATNWLSVGDTAELLDQMVNEQGLIVFCYHNQAFAQADGIW FEIFLDYDLVIILANDAETLFTPLAQQYRKLSTSSIRDNRANDLLGTNDVLWPEQIIQHKRDLLMISHDADSIFLIRQDQ >Mature_160_residues MFTKFFDWILGRNIPVEPWHLQRLSWLITEYQLDGELAESATNWLSVGDTAELLDQMVNEQGLIVFCYHNQAFAQADGIW FEIFLDYDLVIILANDAETLFTPLAQQYRKLSTSSIRDNRANDLLGTNDVLWPEQIIQHKRDLLMISHDADSIFLIRQDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18661; Mature: 18661
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTKFFDWILGRNIPVEPWHLQRLSWLITEYQLDGELAESATNWLSVGDTAELLDQMVNE CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCC QGLIVFCYHNQAFAQADGIWFEIFLDYDLVIILANDAETLFTPLAQQYRKLSTSSIRDNR CCEEEEEECCCHHHHCCCEEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC ANDLLGTNDVLWPEQIIQHKRDLLMISHDADSIFLIRQDQ CCCCCCCCCCCCHHHHHHCCCCEEEEEECCCEEEEEEECC >Mature Secondary Structure MFTKFFDWILGRNIPVEPWHLQRLSWLITEYQLDGELAESATNWLSVGDTAELLDQMVNE CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCC QGLIVFCYHNQAFAQADGIWFEIFLDYDLVIILANDAETLFTPLAQQYRKLSTSSIRDNR CCEEEEEECCCHHHHCCCEEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC ANDLLGTNDVLWPEQIIQHKRDLLMISHDADSIFLIRQDQ CCCCCCCCCCCCHHHHHHCCCCEEEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA