Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is hemH
Identifier: 159900064
GI number: 159900064
Start: 4463829
End: 4464746
Strand: Direct
Name: hemH
Synonym: Haur_3547
Alternate gene names: 159900064
Gene position: 4463829-4464746 (Clockwise)
Preceding gene: 159900063
Following gene: 159900065
Centisome position: 70.33
GC content: 48.15
Gene sequence:
>918_bases ATGTCAGCCAAAACAGCTGTCTTGCTGATGGCCTATGGCACACCCAATCGCATCGATGAAGTTGAACAATACTACATCAA TGTGCGTGGTGGTCGCATGCCAACGCCAGAGCAGGTCGAAAATCTTTCAGCTCGCTATCGAGCAGTTGGTGGTCATACCC CGCTGACCACATTAACCAAATCGGTGACTGATCAACTGCAAGCCCAACTTGATGCCGAATTTCCTGACCAATATCAGGTT TACTTTGGAATGAAATATTGGCATCCATTAATTCCCGATGTGGTCAAGCAAATTCATGCCGATGGTATTAGCAAGGTGAT TGGGCTTGCCCTCGCACCGCATTATTCCAAAATCAGCATCGGCGGCTATCAAAAACAAGTTGATCGCGCTAACGAAGAAT TTAACACCAACATCGAATTAACCATGATCAATAGCTGGCAAGAGCAGCCAAAGTTTCGCAATTTGATTGCTAACCGCATC AGCGAGGCCTTAGCTCAATTTCCTGCCGACGTGCGCGATCAAGTAACGGTGTTGTTTAGCGCTCATAGCTTGCCGCAACG AGTCTTGGCCTGGGGCGATCCCTATCCTGATGAGTTGTTGGGTAGCGCCAAAGGCATTGCCGAAATGCTCGAATTGCCAG ATTGGCGTTTTACCTATCAAAGCCAAGGTGAAACTGGCGAACCATGGCTTGGGCCTGATGTGCTCGATACCTTGGCTGAA TTGGCGGCTGAAGGCAAAAAATATGTGCTGCAAGTGCCATTTGGCTTTGTCTGCGACCACCTCGAAATTCTTTACGATAT TGATATTGAGGGCAAGCACAAAGCCAACGAGTTAGGCTTGCAACTTGAACGCATTCGCTTGCTCAACGATGATCCAGCCT TCGTCGATTTGCTCAAAACCGTCGTGACTGGCCAATAA
Upstream 100 bases:
>100_bases AACATAAAATAATTCTTCGCGATCTTCGTGTTCTTCGCGGTTTCAAGCCTTCGGGTTCCTTCGTGCGCTTTGTGGATCAT TAATAGATAAGAGGTAATCA
Downstream 100 bases:
>100_bases AGAGGGAGCAGCGGTCAGTAAAGAGGGGATAGGCTACGGCAACCGCAAAGATTAGGAAGAATGCCGCTGGGCAGAACGAT ACGTGTCAGGTTTATCGAGG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSAKTAVLLMAYGTPNRIDEVEQYYINVRGGRMPTPEQVENLSARYRAVGGHTPLTTLTKSVTDQLQAQLDAEFPDQYQV YFGMKYWHPLIPDVVKQIHADGISKVIGLALAPHYSKISIGGYQKQVDRANEEFNTNIELTMINSWQEQPKFRNLIANRI SEALAQFPADVRDQVTVLFSAHSLPQRVLAWGDPYPDELLGSAKGIAEMLELPDWRFTYQSQGETGEPWLGPDVLDTLAE LAAEGKKYVLQVPFGFVCDHLEILYDIDIEGKHKANELGLQLERIRLLNDDPAFVDLLKTVVTGQ
Sequences:
>Translated_305_residues MSAKTAVLLMAYGTPNRIDEVEQYYINVRGGRMPTPEQVENLSARYRAVGGHTPLTTLTKSVTDQLQAQLDAEFPDQYQV YFGMKYWHPLIPDVVKQIHADGISKVIGLALAPHYSKISIGGYQKQVDRANEEFNTNIELTMINSWQEQPKFRNLIANRI SEALAQFPADVRDQVTVLFSAHSLPQRVLAWGDPYPDELLGSAKGIAEMLELPDWRFTYQSQGETGEPWLGPDVLDTLAE LAAEGKKYVLQVPFGFVCDHLEILYDIDIEGKHKANELGLQLERIRLLNDDPAFVDLLKTVVTGQ >Mature_304_residues SAKTAVLLMAYGTPNRIDEVEQYYINVRGGRMPTPEQVENLSARYRAVGGHTPLTTLTKSVTDQLQAQLDAEFPDQYQVY FGMKYWHPLIPDVVKQIHADGISKVIGLALAPHYSKISIGGYQKQVDRANEEFNTNIELTMINSWQEQPKFRNLIANRIS EALAQFPADVRDQVTVLFSAHSLPQRVLAWGDPYPDELLGSAKGIAEMLELPDWRFTYQSQGETGEPWLGPDVLDTLAEL AAEGKKYVLQVPFGFVCDHLEILYDIDIEGKHKANELGLQLERIRLLNDDPAFVDLLKTVVTGQ
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499025, Length=275, Percent_Identity=31.6363636363636, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI60499021, Length=275, Percent_Identity=31.6363636363636, Blast_Score=142, Evalue=4e-34, Organism=Escherichia coli, GI1786681, Length=227, Percent_Identity=24.2290748898678, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324750, Length=318, Percent_Identity=26.1006289308176, Blast_Score=125, Evalue=1e-29, Organism=Drosophila melanogaster, GI17864156, Length=320, Percent_Identity=28.4375, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24651774, Length=254, Percent_Identity=26.3779527559055, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI45552018, Length=170, Percent_Identity=33.5294117647059, Blast_Score=95, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_HERA2 (A9B546)
Other databases:
- EMBL: CP000875 - RefSeq: YP_001546311.1 - ProteinModelPortal: A9B546 - SMR: A9B546 - GeneID: 5735406 - GenomeReviews: CP000875_GR - KEGG: hau:Haur_3547 - HOGENOM: HBG697135 - OMA: LAPHFST - ProtClustDB: CLSK973757 - BioCyc: HAUR316274:HAUR_3547-MONOMER - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - InterPro: IPR019772 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 34315; Mature: 34184
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKTAVLLMAYGTPNRIDEVEQYYINVRGGRMPTPEQVENLSARYRAVGGHTPLTTLTK CCCCEEEEEEECCCCCHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH SVTDQLQAQLDAEFPDQYQVYFGMKYWHPLIPDVVKQIHADGISKVIGLALAPHYSKISI HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC GGYQKQVDRANEEFNTNIELTMINSWQEQPKFRNLIANRISEALAQFPADVRDQVTVLFS CCHHHHHHHCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEHHHH AHSLPQRVLAWGDPYPDELLGSAKGIAEMLELPDWRFTYQSQGETGEPWLGPDVLDTLAE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHH LAAEGKKYVLQVPFGFVCDHLEILYDIDIEGKHKANELGLQLERIRLLNDDPAFVDLLKT HHHCCCEEEEECCHHHHHHHHHEEEECCCCCCCCHHHHCHHHHHHHHCCCCHHHHHHHHH VVTGQ HHCCC >Mature Secondary Structure SAKTAVLLMAYGTPNRIDEVEQYYINVRGGRMPTPEQVENLSARYRAVGGHTPLTTLTK CCCEEEEEEECCCCCHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH SVTDQLQAQLDAEFPDQYQVYFGMKYWHPLIPDVVKQIHADGISKVIGLALAPHYSKISI HHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC GGYQKQVDRANEEFNTNIELTMINSWQEQPKFRNLIANRISEALAQFPADVRDQVTVLFS CCHHHHHHHCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEHHHH AHSLPQRVLAWGDPYPDELLGSAKGIAEMLELPDWRFTYQSQGETGEPWLGPDVLDTLAE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHH LAAEGKKYVLQVPFGFVCDHLEILYDIDIEGKHKANELGLQLERIRLLNDDPAFVDLLKT HHHCCCEEEEECCHHHHHHHHHEEEECCCCCCCCHHHHCHHHHHHHHCCCCHHHHHHHHH VVTGQ HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA