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The map label for this gene is rsbRD [H]

Identifier: 159899959

GI number: 159899959

Start: 4329931

End: 4330959

Strand: Direct

Name: rsbRD [H]

Synonym: Haur_3442

Alternate gene names: 159899959

Gene position: 4329931-4330959 (Clockwise)

Preceding gene: 159899958

Following gene: 159899960

Centisome position: 68.22

GC content: 43.54

Gene sequence:

>1029_bases
GTGCCCGATTCAAAGCAGCTACCCGTCGAACGTGCCAAATTGTATGCACGAATTATGCTCGGCATTACCGCCTTGTTTTT
GCCAATTTCAATTTTTGATTGGGCCAATGTTCAATCACAAATTAATTTCTATGTGGCGATTGTCCATGGATTATTAATTG
TTGGCTATATGTTCCTACTCAAGCCAAACAATTTATATCCATTAACGTTCGTATTGCATTTTGCTAGTTCGATTACTGTA
GCCGTGGTCAATCATAATATTGGTGGTTTTGTATCGTATAATTTTGCGATTATTTGTATTGAGTTAATGGGCACAGGTTT
CATTTTGGGGCGGGCACGCTGGATTATTGCTGCAACAGCAATGAGTATTATCATTCATTTGATTGCAATTATCAATGAAA
TTACGCTTTTTTGGAGCTTTAGCGATCCCAATTCGCTGATCATGATGAGTGTCAGTGATAATTATAAATATCTTGCCATC
GTTTCACAAACAATTTTATTACTTGGTACCGGCGCAATTATCACTATTTTGACCCACGTCATTAATCAACGTGAATATGA
ATTAGAACAATCGCGCCAAGCAATGCAGCAACGCTCCGACGAACTAGCCGCCTTGGCGATTCGGCTGGAAACCTCGAATC
AACAATTAGTTTCAACCGAAACAACACTGCGCCAAACGGTTGATGCCTTGACTGTGGCGGCCTTGCCCGTCGGCGATGAT
GTGGTGGTGCTGCCGTTAATCGGAGGCTTCGATACCCAACGCGCCAAAGCGGTGGAAGATTCCTTGCTAAGCTATATTCA
CGAACAACGGGCAAATACCTTAATTCTCGATTTAACCAGCGTTCTGGTAGCATCCGATAGCTTGCTGACCATGCTTGAAC
GAATTATCCAAGGGGCAAAATTATTAGGCACGCGGGTGATTTTGGCTGGATTACAACCCGAAGTAGCTCCAATGATGGTA
CAGTTAAAGCTCAACCGCCAAACCGTGCTGTCAGCACCGACCTTGGCGGCAGCCTTAGAACTTCGCTAA

Upstream 100 bases:

>100_bases
TTAGGCGAAATTACTGGCGAAACTGTCGAACATGATTTATTGAATATGATCTTTAGTCGCTTTTGTATTGGCAAATAATC
ACGCCCACAAGGAGCCACCC

Downstream 100 bases:

>100_bases
ATAAGGGGGATATGTGGAAACAACGCGGGCTCATGTGATTGTCACTGGAACGGTTCAGGGAGTCAATTTTCGCGCGACCT
GCCGCGATCAAGCGCGTTTG

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Stressosome protein rsbRD [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MPDSKQLPVERAKLYARIMLGITALFLPISIFDWANVQSQINFYVAIVHGLLIVGYMFLLKPNNLYPLTFVLHFASSITV
AVVNHNIGGFVSYNFAIICIELMGTGFILGRARWIIAATAMSIIIHLIAIINEITLFWSFSDPNSLIMMSVSDNYKYLAI
VSQTILLLGTGAIITILTHVINQREYELEQSRQAMQQRSDELAALAIRLETSNQQLVSTETTLRQTVDALTVAALPVGDD
VVVLPLIGGFDTQRAKAVEDSLLSYIHEQRANTLILDLTSVLVASDSLLTMLERIIQGAKLLGTRVILAGLQPEVAPMMV
QLKLNRQTVLSAPTLAAALELR

Sequences:

>Translated_342_residues
MPDSKQLPVERAKLYARIMLGITALFLPISIFDWANVQSQINFYVAIVHGLLIVGYMFLLKPNNLYPLTFVLHFASSITV
AVVNHNIGGFVSYNFAIICIELMGTGFILGRARWIIAATAMSIIIHLIAIINEITLFWSFSDPNSLIMMSVSDNYKYLAI
VSQTILLLGTGAIITILTHVINQREYELEQSRQAMQQRSDELAALAIRLETSNQQLVSTETTLRQTVDALTVAALPVGDD
VVVLPLIGGFDTQRAKAVEDSLLSYIHEQRANTLILDLTSVLVASDSLLTMLERIIQGAKLLGTRVILAGLQPEVAPMMV
QLKLNRQTVLSAPTLAAALELR
>Mature_341_residues
PDSKQLPVERAKLYARIMLGITALFLPISIFDWANVQSQINFYVAIVHGLLIVGYMFLLKPNNLYPLTFVLHFASSITVA
VVNHNIGGFVSYNFAIICIELMGTGFILGRARWIIAATAMSIIIHLIAIINEITLFWSFSDPNSLIMMSVSDNYKYLAIV
SQTILLLGTGAIITILTHVINQREYELEQSRQAMQQRSDELAALAIRLETSNQQLVSTETTLRQTVDALTVAALPVGDDV
VVLPLIGGFDTQRAKAVEDSLLSYIHEQRANTLILDLTSVLVASDSLLTMLERIIQGAKLLGTRVILAGLQPEVAPMMVQ
LKLNRQTVLSAPTLAAALELR

Specific function: Negative regulator of sigma-B activity. Non- phosphorylated rsbS binds to rsbT, preventing its association with rsbU. Requires any one of rsbRA, rsbRB, rsbRC or rsbRD to sequester rsbT. When rsbS and the rsbR paralog(s) are phosphorylated, they release rs

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 37690; Mature: 37559

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSKQLPVERAKLYARIMLGITALFLPISIFDWANVQSQINFYVAIVHGLLIVGYMFLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
KPNNLYPLTFVLHFASSITVAVVNHNIGGFVSYNFAIICIELMGTGFILGRARWIIAATA
CCCCCCHHHHHHHHHCCEEEEEEECCCCCEEEHHHHEEEEEHHCCCEEEHHHHHHHHHHH
MSIIIHLIAIINEITLFWSFSDPNSLIMMSVSDNYKYLAIVSQTILLLGTGAIITILTHV
HHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCEEEHHHHHHHHHHCCCHHHHHHHHH
INQREYELEQSRQAMQQRSDELAALAIRLETSNQQLVSTETTLRQTVDALTVAALPVGDD
HCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHEEECCCCC
VVVLPLIGGFDTQRAKAVEDSLLSYIHEQRANTLILDLTSVLVASDSLLTMLERIIQGAK
EEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHHHHHHHHCCHH
LLGTRVILAGLQPEVAPMMVQLKLNRQTVLSAPTLAAALELR
HHHHHHEEECCCCCCCCEEEEEEECCHHHCCCCHHHHHEECC
>Mature Secondary Structure 
PDSKQLPVERAKLYARIMLGITALFLPISIFDWANVQSQINFYVAIVHGLLIVGYMFLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
KPNNLYPLTFVLHFASSITVAVVNHNIGGFVSYNFAIICIELMGTGFILGRARWIIAATA
CCCCCCHHHHHHHHHCCEEEEEEECCCCCEEEHHHHEEEEEHHCCCEEEHHHHHHHHHHH
MSIIIHLIAIINEITLFWSFSDPNSLIMMSVSDNYKYLAIVSQTILLLGTGAIITILTHV
HHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCEEEHHHHHHHHHHCCCHHHHHHHHH
INQREYELEQSRQAMQQRSDELAALAIRLETSNQQLVSTETTLRQTVDALTVAALPVGDD
HCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHEEECCCCC
VVVLPLIGGFDTQRAKAVEDSLLSYIHEQRANTLILDLTSVLVASDSLLTMLERIIQGAK
EEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHHHHHHHHCCHH
LLGTRVILAGLQPEVAPMMVQLKLNRQTVLSAPTLAAALELR
HHHHHHEEECCCCCCCCEEEEEEECCHHHCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 11157946 [H]