Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899900

Identifier: 159899900

GI number: 159899900

Start: 4265585

End: 4267345

Strand: Direct

Name: 159899900

Synonym: Haur_3383

Alternate gene names: NA

Gene position: 4265585-4267345 (Clockwise)

Preceding gene: 159899899

Following gene: 159899901

Centisome position: 67.21

GC content: 50.09

Gene sequence:

>1761_bases
ATGCGACGACGATGGGTTCGTCTTGGCCTGCTCATGCTTATTGCCATGGGCGTAGTGCTACCTGGAACCAAGGCCGAGGC
TACACCGCCGCCGCCCTTAGCCCAGTATTTCCCCGAAACCGGGCAATCAGCGGTCAACTATTTCTGGCAATTTTGGAAGA
ATACGCCGAATGCCATGCGCGTGTTAGGCTATCCCATTTCTTTGCCATTTGTCCAAGAAAGCTTTACCGAGCCTGGTAAA
TTCTATTTGGTGCAATATTTCGAACGCGCCATCTTAGAAGAACACCCTGAAAACTTCAATCACCCAACCAATGGCAACAA
ATACTTTGTGCTTGGGCGGTTGCTGGGCAAAGAATTGGCCAAGGGTCGCGAAAATGAACCAGCCTTCAAGCCAGTGGCTA
ACCCCAACAATGGTACGGTTTGGTTCCCTGAAACCCAACATACTCTGACCAACACGCCTGGCCCATTTTTGACCTTCTGG
CGCAATTATGGTGGCCTCTCGGTGTTTGGCTATCCTTTGTCAGAGCCATTCCAAGAGCTGAACCCCGATACTGGTAAAGT
CTATTGGGTGCAATATTTCGAGCGCAATCGCTTCGAATATCATCCCGAAGAAAAACCTGAATTCCAAGTGTTGCTTGGTT
TATTGGGTAAACAATACTATAACGAACACAAAACTGAGCCAAAATTGGCCGTCAAGGAATGGTTCTTCCGCTATCACACC
CGCGCCGAAGCCATCCCAGTCGATTTCATCTATGGCTACAATGTTCAAGCCTTCTACCAAGAACGTGATCGCTTATACCA
ATTGGTCAACAACGCCGCCTTTGGCTGGATTCGCCAACAAGCACCTTGGGAAGATCTCCAAGCTGCTGACGGTACAATCT
ACTGGGGTGAGCTGGATAAAGTTATCAACGACGCTCATGCCAAGGGCATTAAAGTCTTGTTAAGTGTGGTTCGTTCGCCA
GAATGGGCCAGCGAAAATGGCACGCACGGCTTGCCATCACGCCGCAACTTCCCCAAATTTGGCGATTTTATGCAGCGCAT
GGCGCAACGCTACAAAGGCAAAGTCCAAGCTTACGAAATTTGGAACGAGCAAAATTATGCGATTGAAAACGGTGGCGTGG
TAGCTCCAGCAGCCTATTATGTGGATATGCTGGAATATGCCTACAAAGGCGTGAAAGCTGCTGACCCCGAAGCAATTGTG
GTTTCTGGCTCACCAACCCCAACTGCCACCAATCGCACCGATATCGCGGTTGATGAGTTGATTTACTTTGCTCAAATGTT
TGCGATTCCTAAATTCTGGAATAACGTTGATGTAATTGGTGCGCACTTCGGCGGCACCTACAATCCACCAGATACCAAGT
GGCCCGATAACCCAGGCCCAGGCCCAGGTTGGCGCGACAACTCCGAATTCTACTGGCGACGGATTGAAGATGTGCGCCAA
GTGCTGGTCAATAGTGGCAACGGCGACCGCCAAATTTGGGTAACCGAAATTGGCTGGGCCACCGCCAACACCAGCCCAGG
CTTTGAATATGGCAACTCGAATACAATCGAAGAACAAGGAGCTTACCTCGAACGAGCAATGTATATGGCTCGCTACGATT
ACGCTCCATGGGTTGGCGCAATGTTCGTGTGGAACTTAAACTTCGCGGTGACCTCACCCGATCCGCTGCACGAAACTGCT
TCATTCGGGGTATTGAACCCTGATTGGAGTCCACGCCCAGCCTATACCCGCTTGCAACAGTTTGCAGCAACCCATAAATA
A

Upstream 100 bases:

>100_bases
GGTTATAAGCAATTTATCAGGTTGGCCATGCTACTATTACGCAGTCAGTACTGAGCAATTGCTTACGAACGATTTAGTGC
ATCGACAAAAGGAGAATGCC

Downstream 100 bases:

>100_bases
TTAACCGAGGTCGGTTGCAACAACACGAAGATCACGCTCTGAAGCCAGTGTTGTGATCTTCGTGTTGTTGTCTGACGAGG
AGTTTGAATATGCCTAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MRRRWVRLGLLMLIAMGVVLPGTKAEATPPPPLAQYFPETGQSAVNYFWQFWKNTPNAMRVLGYPISLPFVQESFTEPGK
FYLVQYFERAILEEHPENFNHPTNGNKYFVLGRLLGKELAKGRENEPAFKPVANPNNGTVWFPETQHTLTNTPGPFLTFW
RNYGGLSVFGYPLSEPFQELNPDTGKVYWVQYFERNRFEYHPEEKPEFQVLLGLLGKQYYNEHKTEPKLAVKEWFFRYHT
RAEAIPVDFIYGYNVQAFYQERDRLYQLVNNAAFGWIRQQAPWEDLQAADGTIYWGELDKVINDAHAKGIKVLLSVVRSP
EWASENGTHGLPSRRNFPKFGDFMQRMAQRYKGKVQAYEIWNEQNYAIENGGVVAPAAYYVDMLEYAYKGVKAADPEAIV
VSGSPTPTATNRTDIAVDELIYFAQMFAIPKFWNNVDVIGAHFGGTYNPPDTKWPDNPGPGPGWRDNSEFYWRRIEDVRQ
VLVNSGNGDRQIWVTEIGWATANTSPGFEYGNSNTIEEQGAYLERAMYMARYDYAPWVGAMFVWNLNFAVTSPDPLHETA
SFGVLNPDWSPRPAYTRLQQFAATHK

Sequences:

>Translated_586_residues
MRRRWVRLGLLMLIAMGVVLPGTKAEATPPPPLAQYFPETGQSAVNYFWQFWKNTPNAMRVLGYPISLPFVQESFTEPGK
FYLVQYFERAILEEHPENFNHPTNGNKYFVLGRLLGKELAKGRENEPAFKPVANPNNGTVWFPETQHTLTNTPGPFLTFW
RNYGGLSVFGYPLSEPFQELNPDTGKVYWVQYFERNRFEYHPEEKPEFQVLLGLLGKQYYNEHKTEPKLAVKEWFFRYHT
RAEAIPVDFIYGYNVQAFYQERDRLYQLVNNAAFGWIRQQAPWEDLQAADGTIYWGELDKVINDAHAKGIKVLLSVVRSP
EWASENGTHGLPSRRNFPKFGDFMQRMAQRYKGKVQAYEIWNEQNYAIENGGVVAPAAYYVDMLEYAYKGVKAADPEAIV
VSGSPTPTATNRTDIAVDELIYFAQMFAIPKFWNNVDVIGAHFGGTYNPPDTKWPDNPGPGPGWRDNSEFYWRRIEDVRQ
VLVNSGNGDRQIWVTEIGWATANTSPGFEYGNSNTIEEQGAYLERAMYMARYDYAPWVGAMFVWNLNFAVTSPDPLHETA
SFGVLNPDWSPRPAYTRLQQFAATHK
>Mature_586_residues
MRRRWVRLGLLMLIAMGVVLPGTKAEATPPPPLAQYFPETGQSAVNYFWQFWKNTPNAMRVLGYPISLPFVQESFTEPGK
FYLVQYFERAILEEHPENFNHPTNGNKYFVLGRLLGKELAKGRENEPAFKPVANPNNGTVWFPETQHTLTNTPGPFLTFW
RNYGGLSVFGYPLSEPFQELNPDTGKVYWVQYFERNRFEYHPEEKPEFQVLLGLLGKQYYNEHKTEPKLAVKEWFFRYHT
RAEAIPVDFIYGYNVQAFYQERDRLYQLVNNAAFGWIRQQAPWEDLQAADGTIYWGELDKVINDAHAKGIKVLLSVVRSP
EWASENGTHGLPSRRNFPKFGDFMQRMAQRYKGKVQAYEIWNEQNYAIENGGVVAPAAYYVDMLEYAYKGVKAADPEAIV
VSGSPTPTATNRTDIAVDELIYFAQMFAIPKFWNNVDVIGAHFGGTYNPPDTKWPDNPGPGPGWRDNSEFYWRRIEDVRQ
VLVNSGNGDRQIWVTEIGWATANTSPGFEYGNSNTIEEQGAYLERAMYMARYDYAPWVGAMFVWNLNFAVTSPDPLHETA
SFGVLNPDWSPRPAYTRLQQFAATHK

Specific function: Unknown

COG id: COG3664

COG function: function code G; Beta-xylosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67387; Mature: 67387

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRWVRLGLLMLIAMGVVLPGTKAEATPPPPLAQYFPETGQSAVNYFWQFWKNTPNAMR
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEE
VLGYPISLPFVQESFTEPGKFYLVQYFERAILEEHPENFNHPTNGNKYFVLGRLLGKELA
EECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHH
KGRENEPAFKPVANPNNGTVWFPETQHTLTNTPGPFLTFWRNYGGLSVFGYPLSEPFQEL
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHC
NPDTGKVYWVQYFERNRFEYHPEEKPEFQVLLGLLGKQYYNEHKTEPKLAVKEWFFRYHT
CCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
RAEAIPVDFIYGYNVQAFYQERDRLYQLVNNAAFGWIRQQAPWEDLQAADGTIYWGELDK
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECHHHH
VINDAHAKGIKVLLSVVRSPEWASENGTHGLPSRRNFPKFGDFMQRMAQRYKGKVQAYEI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
WNEQNYAIENGGVVAPAAYYVDMLEYAYKGVKAADPEAIVVSGSPTPTATNRTDIAVDEL
ECCCCEEECCCCEECHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHH
IYFAQMFAIPKFWNNVDVIGAHFGGTYNPPDTKWPDNPGPGPGWRDNSEFYWRRIEDVRQ
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VLVNSGNGDRQIWVTEIGWATANTSPGFEYGNSNTIEEQGAYLERAMYMARYDYAPWVGA
HHHCCCCCCCEEEEEEECEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHE
MFVWNLNFAVTSPDPLHETASFGVLNPDWSPRPAYTRLQQFAATHK
EEEEEEEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRRWVRLGLLMLIAMGVVLPGTKAEATPPPPLAQYFPETGQSAVNYFWQFWKNTPNAMR
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEE
VLGYPISLPFVQESFTEPGKFYLVQYFERAILEEHPENFNHPTNGNKYFVLGRLLGKELA
EECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHH
KGRENEPAFKPVANPNNGTVWFPETQHTLTNTPGPFLTFWRNYGGLSVFGYPLSEPFQEL
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHC
NPDTGKVYWVQYFERNRFEYHPEEKPEFQVLLGLLGKQYYNEHKTEPKLAVKEWFFRYHT
CCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
RAEAIPVDFIYGYNVQAFYQERDRLYQLVNNAAFGWIRQQAPWEDLQAADGTIYWGELDK
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECHHHH
VINDAHAKGIKVLLSVVRSPEWASENGTHGLPSRRNFPKFGDFMQRMAQRYKGKVQAYEI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
WNEQNYAIENGGVVAPAAYYVDMLEYAYKGVKAADPEAIVVSGSPTPTATNRTDIAVDEL
ECCCCEEECCCCEECHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHH
IYFAQMFAIPKFWNNVDVIGAHFGGTYNPPDTKWPDNPGPGPGWRDNSEFYWRRIEDVRQ
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VLVNSGNGDRQIWVTEIGWATANTSPGFEYGNSNTIEEQGAYLERAMYMARYDYAPWVGA
HHHCCCCCCCEEEEEEECEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHE
MFVWNLNFAVTSPDPLHETASFGVLNPDWSPRPAYTRLQQFAATHK
EEEEEEEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA