Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is pncB [H]
Identifier: 159899898
GI number: 159899898
Start: 4262832
End: 4264367
Strand: Direct
Name: pncB [H]
Synonym: Haur_3381
Alternate gene names: 159899898
Gene position: 4262832-4264367 (Clockwise)
Preceding gene: 159899892
Following gene: 159899899
Centisome position: 67.17
GC content: 55.27
Gene sequence:
>1536_bases ATGACAACCCGCTTTCAACATGGCATTCTCTTCACCGATCAATATCAATTAACCATGTCGCAGGTGTATTATCGCTTGGG GCTGCATGAACGCCCAGCCTTGTTCGACCACTACTTCCGTTCGTATCCCAATTATGGAGCGCATGCGGCGGGCTATGCGG TGGCCGCTGGCATGCAACCCTTGCTCGAATGGATGGATACCGCCCGCTTTGGCGAAGGCGAAATCGCTGCGCTCTCGGCG ATGAAAGGCCGCACTGGCCAAGCGTTGTTTAGCAGCGATTTTTTGGGCTGGCTGCGCAAATATGGCGATCTGCGCAATGT TACGATTCGGGCGATTCCCGAGGGGCGTGTGGTGCATCACACCGTGCCAATGACGATTGTCGAAGGCCCATTGGTGTTGG CGCAAATTCTCGAAACGCCCTTGTTGAATATGCTCAACTTCAGCACACTTATCGCTACCAAAGCGGCACGGGTGCGCGAG AGCGCTGGCGATGGCTTATTTTTGGAATTTGGCATGCGCCGCGCTCAAGGCTGGGGAGCCAATTTGGCCACTCGGGCAGC CCTCATCGGCGGGGCTGATAGCTCATCGAACGTTGGCGCAGCGCTGGATATGGGTGTGCAGCCAAGTGGCACCCATGCCC ATAGTTTGGTCCAAACCGCCATGGCGTTGGGCATGGGCGAATTAGGCGCATTCGAGGCCTACGCTGAAGCCTACCCCGAC GACACGCTGCTGCTGGTCGATACGATCAACACCTTGGAAAGCGGCGTGCCCAATGCGATCAAGGTATTTGAAAAGTTGCG TCGCCAAGGCCATAAACCCGTTGGCATTCGGCTCGATTCAGGCGACTTGGCCTATTTGAGCATTCAGGCCGCCAAAATGC TCAATACTGCCGGATTCCCCGATGTTTCGATTGTGCTTTCCAACAATCTCGATGAATTAGTGATTTGGCAAATTTTGACC CAAATTCGCGCCGAAGCGCCGCGCTATGGCCTTGAAGCCGATGCCGTAATCAAGCGCTTGGTGTTTGGGGTCGGCACGCA TTTGGTCACATCGTGGGGCGAACCAGCCTTAGGCGGCGTGTATAAATTGGTTTCATTGTTTGATCGCGATACATGGAAAC CAGCGATCAAGCTCTCAGAGAACCCGCAGAAAACTCCAACTCCTGGGCGCAAAGCAGCATGGCGGGTCTATGATAGCCGT GGGCGAGCTAGCGCCGATGTTTTGACCTTGGATGACGAACATCCACAGCAAAGCGAAGCCTTGAGCCTGTATCACCCAAC TGATTCGAGCAAACAACGCACCCTGACTCCTGCCGACCACACCATTGAGGCCTTGTATGCGACGGTGCTCGATTCTGGCC GACGGGTCGTTGATGTGCCCGATTTGGCCGAGTTGCGCGAACGGCGGGTGCGCGATTTGGCGCGGCTTGATCCTGGGGTT TTGCGCTTGGTCAATCCCCACATCTACCACGTTTCGCTCAGCCAACGCTTATGGGAATTGAAACAGAACCTGATTAAAGA GATGCGCAAGGGCTAA
Upstream 100 bases:
>100_bases TCCTTCGTGTCCTTCGTGTCCTTCGTGGATCATTAGTGCTTGACAATTAGTGTATTATAGACACTAAGTCAGTTTTTCGA TTTACAAAGGATAGCAATAT
Downstream 100 bases:
>100_bases GCGCGATCAAACGCCTTGAGATTGGCCACGTTAATAATCAACTGGCAAATTTAAGGCTTATTTATAAAGATTTTTAATAA ATTTATTATTCGATCAGCCC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MTTRFQHGILFTDQYQLTMSQVYYRLGLHERPALFDHYFRSYPNYGAHAAGYAVAAGMQPLLEWMDTARFGEGEIAALSA MKGRTGQALFSSDFLGWLRKYGDLRNVTIRAIPEGRVVHHTVPMTIVEGPLVLAQILETPLLNMLNFSTLIATKAARVRE SAGDGLFLEFGMRRAQGWGANLATRAALIGGADSSSNVGAALDMGVQPSGTHAHSLVQTAMALGMGELGAFEAYAEAYPD DTLLLVDTINTLESGVPNAIKVFEKLRRQGHKPVGIRLDSGDLAYLSIQAAKMLNTAGFPDVSIVLSNNLDELVIWQILT QIRAEAPRYGLEADAVIKRLVFGVGTHLVTSWGEPALGGVYKLVSLFDRDTWKPAIKLSENPQKTPTPGRKAAWRVYDSR GRASADVLTLDDEHPQQSEALSLYHPTDSSKQRTLTPADHTIEALYATVLDSGRRVVDVPDLAELRERRVRDLARLDPGV LRLVNPHIYHVSLSQRLWELKQNLIKEMRKG
Sequences:
>Translated_511_residues MTTRFQHGILFTDQYQLTMSQVYYRLGLHERPALFDHYFRSYPNYGAHAAGYAVAAGMQPLLEWMDTARFGEGEIAALSA MKGRTGQALFSSDFLGWLRKYGDLRNVTIRAIPEGRVVHHTVPMTIVEGPLVLAQILETPLLNMLNFSTLIATKAARVRE SAGDGLFLEFGMRRAQGWGANLATRAALIGGADSSSNVGAALDMGVQPSGTHAHSLVQTAMALGMGELGAFEAYAEAYPD DTLLLVDTINTLESGVPNAIKVFEKLRRQGHKPVGIRLDSGDLAYLSIQAAKMLNTAGFPDVSIVLSNNLDELVIWQILT QIRAEAPRYGLEADAVIKRLVFGVGTHLVTSWGEPALGGVYKLVSLFDRDTWKPAIKLSENPQKTPTPGRKAAWRVYDSR GRASADVLTLDDEHPQQSEALSLYHPTDSSKQRTLTPADHTIEALYATVLDSGRRVVDVPDLAELRERRVRDLARLDPGV LRLVNPHIYHVSLSQRLWELKQNLIKEMRKG >Mature_510_residues TTRFQHGILFTDQYQLTMSQVYYRLGLHERPALFDHYFRSYPNYGAHAAGYAVAAGMQPLLEWMDTARFGEGEIAALSAM KGRTGQALFSSDFLGWLRKYGDLRNVTIRAIPEGRVVHHTVPMTIVEGPLVLAQILETPLLNMLNFSTLIATKAARVRES AGDGLFLEFGMRRAQGWGANLATRAALIGGADSSSNVGAALDMGVQPSGTHAHSLVQTAMALGMGELGAFEAYAEAYPDD TLLLVDTINTLESGVPNAIKVFEKLRRQGHKPVGIRLDSGDLAYLSIQAAKMLNTAGFPDVSIVLSNNLDELVIWQILTQ IRAEAPRYGLEADAVIKRLVFGVGTHLVTSWGEPALGGVYKLVSLFDRDTWKPAIKLSENPQKTPTPGRKAAWRVYDSRG RASADVLTLDDEHPQQSEALSLYHPTDSSKQRTLTPADHTIEALYATVLDSGRRVVDVPDLAELRERRVRDLARLDPGVL RLVNPHIYHVSLSQRLWELKQNLIKEMRKG
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI194394158, Length=549, Percent_Identity=35.1548269581056, Blast_Score=243, Evalue=4e-64, Organism=Caenorhabditis elegans, GI71997947, Length=552, Percent_Identity=33.1521739130435, Blast_Score=274, Evalue=9e-74, Organism=Caenorhabditis elegans, GI71997952, Length=552, Percent_Identity=33.1521739130435, Blast_Score=274, Evalue=1e-73, Organism=Caenorhabditis elegans, GI71997955, Length=212, Percent_Identity=36.3207547169811, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24581587, Length=555, Percent_Identity=32.972972972973, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI161076680, Length=262, Percent_Identity=33.587786259542, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24581595, Length=262, Percent_Identity=33.587786259542, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI28574709, Length=262, Percent_Identity=33.587786259542, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24581593, Length=262, Percent_Identity=33.587786259542, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24581591, Length=262, Percent_Identity=33.587786259542, Blast_Score=123, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 56378; Mature: 56247
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRFQHGILFTDQYQLTMSQVYYRLGLHERPALFDHYFRSYPNYGAHAAGYAVAAGMQP CCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH LLEWMDTARFGEGEIAALSAMKGRTGQALFSSDFLGWLRKYGDLRNVTIRAIPEGRVVHH HHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEE TVPMTIVEGPLVLAQILETPLLNMLNFSTLIATKAARVRESAGDGLFLEFGMRRAQGWGA ECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCC NLATRAALIGGADSSSNVGAALDMGVQPSGTHAHSLVQTAMALGMGELGAFEAYAEAYPD CHHHHHHHEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC DTLLLVDTINTLESGVPNAIKVFEKLRRQGHKPVGIRLDSGDLAYLSIQAAKMLNTAGFP CCEEEEECHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCC DVSIVLSNNLDELVIWQILTQIRAEAPRYGLEADAVIKRLVFGVGTHLVTSWGEPALGGV CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH YKLVSLFDRDTWKPAIKLSENPQKTPTPGRKAAWRVYDSRGRASADVLTLDDEHPQQSEA HHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHEEEEECCCCCCCCEEEEECCCCCCCCCC LSLYHPTDSSKQRTLTPADHTIEALYATVLDSGRRVVDVPDLAELRERRVRDLARLDPGV EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCHH LRLVNPHIYHVSLSQRLWELKQNLIKEMRKG EEECCCEEEEEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTRFQHGILFTDQYQLTMSQVYYRLGLHERPALFDHYFRSYPNYGAHAAGYAVAAGMQP CCCCCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH LLEWMDTARFGEGEIAALSAMKGRTGQALFSSDFLGWLRKYGDLRNVTIRAIPEGRVVHH HHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEE TVPMTIVEGPLVLAQILETPLLNMLNFSTLIATKAARVRESAGDGLFLEFGMRRAQGWGA ECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCC NLATRAALIGGADSSSNVGAALDMGVQPSGTHAHSLVQTAMALGMGELGAFEAYAEAYPD CHHHHHHHEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC DTLLLVDTINTLESGVPNAIKVFEKLRRQGHKPVGIRLDSGDLAYLSIQAAKMLNTAGFP CCEEEEECHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCC DVSIVLSNNLDELVIWQILTQIRAEAPRYGLEADAVIKRLVFGVGTHLVTSWGEPALGGV CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH YKLVSLFDRDTWKPAIKLSENPQKTPTPGRKAAWRVYDSRGRASADVLTLDDEHPQQSEA HHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHEEEEECCCCCCCCEEEEECCCCCCCCCC LSLYHPTDSSKQRTLTPADHTIEALYATVLDSGRRVVDVPDLAELRERRVRDLARLDPGV EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCHH LRLVNPHIYHVSLSQRLWELKQNLIKEMRKG EEECCCEEEEEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]