Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 159899837

GI number: 159899837

Start: 4184330

End: 4186093

Strand: Direct

Name: recN [H]

Synonym: Haur_3320

Alternate gene names: 159899837

Gene position: 4184330-4186093 (Clockwise)

Preceding gene: 159899834

Following gene: 159899838

Centisome position: 65.93

GC content: 52.1

Gene sequence:

>1764_bases
ATGCTGCTAGAATTATTTATTGCCGATTTCGCAATTATTGACCAAGTACGCCTGCACTTTACCCCTGCCTTTAATGTGCT
GACGGGTGAAACCGGAGCCGGTAAGTCAATTATGATTGATGCACTCGGCATGTTACGGGGCGAGCGGAGCGATCCCAGCT
TTGTGCGAGCGGGAAGCAATCAAGCCCGGGTTGAAGGTATCTTCACCTTGGCTGATCGCCCTGATATTCTGCCTATTTTA
GCCGAATATGGCCTTGATGGTGCTGATGATGATCAGATTATTCTGACCCGTGAAATTCATGGAGCCAGCGGGCGTAGCGT
TGCTCGAATTAATGGCCGCGCCGTGAGTAGTGCTGTGCTCCGTGATATTGGCGGGCGCTTGGTCGATATCCACGGCCAAA
ACGATAGCCAAACCTTGTTCAATGTACGCACCCACGCCGAAATGCTCGATCGCTATGCTGGAGTTGTCGCTGATCGCGAA
CAACTGAGTCAGCAGGTGATCGCGATTGAAGCCGTGCGCAGCCAAATTAGCACCTTGCGCAATGCCGAAGCGCGTCGCCT
CGAACGGATCGAAGAATTGACCTTTTTGGTTGAGGAATTGACCAACGCCAAGTTGATCGCTGGCGAAGAGGCTACGTTAA
CCAACGAACGCGGTTTATTACAAAATAGTGCTAAAATCACGGGCACGGTTGATACGATCTATCGTTTGTTGCGCACTGGC
ACGCCAGCCAGCGAACGGCGTTCAGCCACCCGTTCAATTGTCGATAGCCTTGATGATGTGGCTAATTTGTTGAGCGAATT
GTTGCGGCTAGACCCAAGTTTGGCTGGATTGAACGAGCAAACCCTTGAAGTGCGCTATCGACTTGACGATGTGATCGAAG
GCGTGCGGGTCTATCGCGATCGGCTGGAGTTTGAGCCAGGCCGTCTCGAAGTGATCGAAGATCGTTTAGCTGAGTTGCGC
GATTTAGCCAAAAAATACCGTGCTGCCGATGCTGCCGAATTGCTCGAACGCTTGACCAGTGCCAGCGATGAACTGGAAAC
CTTGCACTACAGCGCTGAACATATTGCCGAATTGGTGCAACAAGAACAGCAATTGTTGGCAAGCATTGGGCTAGCTGCCG
CTGAACTGAGCCGCCGTCGTCGCCAAGCAGGCGATGAATTGGCTGGGCGGATTGCCGCTGCCATGAGCGATTTAGCCATG
CCGCATGTTAAATTTCATGTGCAAGTATCGCAGCGCAGCGACCCACAAGGCGTATTGATCGATGATCACTATCTCGCCTT
TGATCGCACGGGAGTTGATCAGATTGAGTTTTTACTCAGCCCCAACCCTGGCGAGCCACTCAAACCGCTGGCCAAAATTG
CCTCTGGTGGTGAATCGGCACGCTTGCTCTTGGCGATGAAATCAATTCTTTCAGCAGTTGATAGTGTGCCAACCTTGGTT
TTTGATGAAGTTGATGTGGGAGTTGGGGGACGGGCTGGCCATGTGGTCGGCGAAAAATTATGGGGCATTAGCGATGCCCA
TCAAGTGTTGTGTATTACCCACTTGCCTCAAGTTGCCGCTTTTGGTGATTGCCATTTTGCGATTGCCAAGCAAGTTATTA
ACCAACGCACCCAAACCTTTGTGCAACCACTCAGCGAACAAGAACGCATCGAAGAACTAGCGGCGATGCTTGATGGAACA
CCAGTGAGCGAAGCGAGCCGTCGCTCGGCCAGCGCCATGCTCGAACGGGCTGCCAACTACAAACTGGCAACCAGCAACCC
ATAA

Upstream 100 bases:

>100_bases
CAAATGGGCTATCTAAAGCGAATATGGTACAATTGATCTACATGCAGCTCGTTGTGGTGTTCGCAAACGGCTGTTTTTTT
TAGGGCAAACACGAGAGTCT

Downstream 100 bases:

>100_bases
CTTGAAATTCAGATACCCATGCCTTTGAAGGAGTCTGCCTTGGATTCACGCGAGACAACGATCAGCCTATGGTCGCGGCG
GGTGATGGAAGCCTGCTGGC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MLLELFIADFAIIDQVRLHFTPAFNVLTGETGAGKSIMIDALGMLRGERSDPSFVRAGSNQARVEGIFTLADRPDILPIL
AEYGLDGADDDQIILTREIHGASGRSVARINGRAVSSAVLRDIGGRLVDIHGQNDSQTLFNVRTHAEMLDRYAGVVADRE
QLSQQVIAIEAVRSQISTLRNAEARRLERIEELTFLVEELTNAKLIAGEEATLTNERGLLQNSAKITGTVDTIYRLLRTG
TPASERRSATRSIVDSLDDVANLLSELLRLDPSLAGLNEQTLEVRYRLDDVIEGVRVYRDRLEFEPGRLEVIEDRLAELR
DLAKKYRAADAAELLERLTSASDELETLHYSAEHIAELVQQEQQLLASIGLAAAELSRRRRQAGDELAGRIAAAMSDLAM
PHVKFHVQVSQRSDPQGVLIDDHYLAFDRTGVDQIEFLLSPNPGEPLKPLAKIASGGESARLLLAMKSILSAVDSVPTLV
FDEVDVGVGGRAGHVVGEKLWGISDAHQVLCITHLPQVAAFGDCHFAIAKQVINQRTQTFVQPLSEQERIEELAAMLDGT
PVSEASRRSASAMLERAANYKLATSNP

Sequences:

>Translated_587_residues
MLLELFIADFAIIDQVRLHFTPAFNVLTGETGAGKSIMIDALGMLRGERSDPSFVRAGSNQARVEGIFTLADRPDILPIL
AEYGLDGADDDQIILTREIHGASGRSVARINGRAVSSAVLRDIGGRLVDIHGQNDSQTLFNVRTHAEMLDRYAGVVADRE
QLSQQVIAIEAVRSQISTLRNAEARRLERIEELTFLVEELTNAKLIAGEEATLTNERGLLQNSAKITGTVDTIYRLLRTG
TPASERRSATRSIVDSLDDVANLLSELLRLDPSLAGLNEQTLEVRYRLDDVIEGVRVYRDRLEFEPGRLEVIEDRLAELR
DLAKKYRAADAAELLERLTSASDELETLHYSAEHIAELVQQEQQLLASIGLAAAELSRRRRQAGDELAGRIAAAMSDLAM
PHVKFHVQVSQRSDPQGVLIDDHYLAFDRTGVDQIEFLLSPNPGEPLKPLAKIASGGESARLLLAMKSILSAVDSVPTLV
FDEVDVGVGGRAGHVVGEKLWGISDAHQVLCITHLPQVAAFGDCHFAIAKQVINQRTQTFVQPLSEQERIEELAAMLDGT
PVSEASRRSASAMLERAANYKLATSNP
>Mature_587_residues
MLLELFIADFAIIDQVRLHFTPAFNVLTGETGAGKSIMIDALGMLRGERSDPSFVRAGSNQARVEGIFTLADRPDILPIL
AEYGLDGADDDQIILTREIHGASGRSVARINGRAVSSAVLRDIGGRLVDIHGQNDSQTLFNVRTHAEMLDRYAGVVADRE
QLSQQVIAIEAVRSQISTLRNAEARRLERIEELTFLVEELTNAKLIAGEEATLTNERGLLQNSAKITGTVDTIYRLLRTG
TPASERRSATRSIVDSLDDVANLLSELLRLDPSLAGLNEQTLEVRYRLDDVIEGVRVYRDRLEFEPGRLEVIEDRLAELR
DLAKKYRAADAAELLERLTSASDELETLHYSAEHIAELVQQEQQLLASIGLAAAELSRRRRQAGDELAGRIAAAMSDLAM
PHVKFHVQVSQRSDPQGVLIDDHYLAFDRTGVDQIEFLLSPNPGEPLKPLAKIASGGESARLLLAMKSILSAVDSVPTLV
FDEVDVGVGGRAGHVVGEKLWGISDAHQVLCITHLPQVAAFGDCHFAIAKQVINQRTQTFVQPLSEQERIEELAAMLDGT
PVSEASRRSASAMLERAANYKLATSNP

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=582, Percent_Identity=34.020618556701, Blast_Score=286, Evalue=4e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 64307; Mature: 64307

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLELFIADFAIIDQVRLHFTPAFNVLTGETGAGKSIMIDALGMLRGERSDPSFVRAGSN
CCHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCEECCCC
QARVEGIFTLADRPDILPILAEYGLDGADDDQIILTREIHGASGRSVARINGRAVSSAVL
CCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHH
RDIGGRLVDIHGQNDSQTLFNVRTHAEMLDRYAGVVADREQLSQQVIAIEAVRSQISTLR
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAEARRLERIEELTFLVEELTNAKLIAGEEATLTNERGLLQNSAKITGTVDTIYRLLRTG
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHCCCCCEEECHHHHHHHHHCC
TPASERRSATRSIVDSLDDVANLLSELLRLDPSLAGLNEQTLEVRYRLDDVIEGVRVYRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLEFEPGRLEVIEDRLAELRDLAKKYRAADAAELLERLTSASDELETLHYSAEHIAELVQ
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
QEQQLLASIGLAAAELSRRRRQAGDELAGRIAAAMSDLAMPHVKFHVQVSQRSDPQGVLI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEE
DDHYLAFDRTGVDQIEFLLSPNPGEPLKPLAKIASGGESARLLLAMKSILSAVDSVPTLV
ECCEEEECCCCHHHHHEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHE
FDEVDVGVGGRAGHVVGEKLWGISDAHQVLCITHLPQVAAFGDCHFAIAKQVINQRTQTF
EECCCCCCCCCCCHHHHHHHCCCCCHHHEEHHHHCCHHHHCCCHHHHHHHHHHHHHHHHH
VQPLSEQERIEELAAMLDGTPVSEASRRSASAMLERAANYKLATSNP
HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure
MLLELFIADFAIIDQVRLHFTPAFNVLTGETGAGKSIMIDALGMLRGERSDPSFVRAGSN
CCHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCEECCCC
QARVEGIFTLADRPDILPILAEYGLDGADDDQIILTREIHGASGRSVARINGRAVSSAVL
CCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHH
RDIGGRLVDIHGQNDSQTLFNVRTHAEMLDRYAGVVADREQLSQQVIAIEAVRSQISTLR
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAEARRLERIEELTFLVEELTNAKLIAGEEATLTNERGLLQNSAKITGTVDTIYRLLRTG
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHCCCCCEEECHHHHHHHHHCC
TPASERRSATRSIVDSLDDVANLLSELLRLDPSLAGLNEQTLEVRYRLDDVIEGVRVYRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLEFEPGRLEVIEDRLAELRDLAKKYRAADAAELLERLTSASDELETLHYSAEHIAELVQ
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
QEQQLLASIGLAAAELSRRRRQAGDELAGRIAAAMSDLAMPHVKFHVQVSQRSDPQGVLI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEE
DDHYLAFDRTGVDQIEFLLSPNPGEPLKPLAKIASGGESARLLLAMKSILSAVDSVPTLV
ECCEEEECCCCHHHHHEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHE
FDEVDVGVGGRAGHVVGEKLWGISDAHQVLCITHLPQVAAFGDCHFAIAKQVINQRTQTF
EECCCCCCCCCCCHHHHHHHCCCCCHHHEEHHHHCCHHHHCCCHHHHHHHHHHHHHHHHH
VQPLSEQERIEELAAMLDGTPVSEASRRSASAMLERAANYKLATSNP
HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]