Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899797

Identifier: 159899797

GI number: 159899797

Start: 4144575

End: 4145876

Strand: Direct

Name: 159899797

Synonym: Haur_3279

Alternate gene names: NA

Gene position: 4144575-4145876 (Clockwise)

Preceding gene: 159899796

Following gene: 159899798

Centisome position: 65.3

GC content: 45.55

Gene sequence:

>1302_bases
ATGAAATGGCAATGGGTATGCCGACTAGGCTTGCTATTAAGCCTCGGATTTTTTAGTAACCCCGTAGCTGCGACGCAAAG
CCAAACGCTCAGCCGCGAGATTGTCAGCGAGCATACGATTACGCAGCTTAAACTTGATGGCAATTGGCTGGCGTGGCGCA
CCTGGCGCACCGATTTCGTCAATTATACGAGTGAATTATGGGTAACCAATCTTACGACTGGAACGAGTGTTAGCCTTGGC
AGTATTCAAAATGAAACCTATGACTTCTTTATTGATAATGGTCGGGTAATCTGGCGCGATAAGCACCATGTCTATCAGTA
TGATCTGGCGACCCAAACCAATACCATCTTGCAAGTGCCCCATCAGCAAAACCACATGCGTTGGACGGTTGCTGGCGATT
GGCTGATTTGGCTGGAACTCGAAGGTTCACCACCGCAACTCACCAATCAAATCTGGAAATGGCATCTGGCTGGCAATCAG
GCTCCAGTCTTGGTTGGCAGCGAGGTAGCCACGATTTATGGCATTGATTCGCTGCAATCTGATGGCGAGATTATTAGTTG
GGCTTATGCCACCCATGTTGTTGTAAAAAATAGTGTCTGCTCAGAGATCCATTATCTTGCTTTAGATGGATCACAGGCAC
CTCAAAAACTAACCGAACCCGCTTGTAATATCGGGATTAAGCAAAATCTATTACTGAATAAGAACTTTTATTATTGTAAC
AATCAACATTTATATGCTCGAACACTAGCAAATACTGAAATCTTGATCAACGAAAATAATTGTCGTTTTGATGCGCTGTA
TGGTTTTTCTGGAAGCGGAAATTTCTTGGTAGCGCTCAATTATGGTGAACATACTACTTCCCAGATTAGCGTCGTGGGGG
TTGATATTCGACAAAAAAGCATGTTTACAATTGACCGCTTTGGCTATAGCGATAGTGGTCGTCCATTGATTCATATTGAT
AATTCACTCGTAGCATGGAGCGATAATCGTGGAGCCAAGCCAGTAATTCATGTGCGGCCCATTGCTGAGGTTGTGCCAAC
CGCCCCACGCCAAGCCGCCGATCCATTGCTAGAGAATCGCAGCTATTACCCTGAAAGTCAGCACTCGCTTGGTGGATTAT
TTGAACAATATTGGCAGAAGAATGGGGCTTGGCAGTGTTTGGCTATCCGCAAAGCGAAGAATTTAGCCAAATCAATGCCG
ATACTGGTAAAACTTATACGGTGCAATTGCTTGAGCGTCAGCGCTACGAACATCACCCTGAATTGGCTGGCACACCATAT
GAGGTTTCGTTGGGGCGTTTAG

Upstream 100 bases:

>100_bases
TCAGATACTCACAACTCCTGTTTCAGTTCGCTAGCAGCCAAAATCAGCTTTCTTTCGACTACACTCGTTTTCAGTAGTTT
TGGTGTAGAAAGGACGCACG

Downstream 100 bases:

>100_bases
GAGCCGAGCGTTTGACCACACTCAATCGTAATTGGCAAAACGAGGGCGATACTTCGGCTGGAGCCGAGCAATTGCCTGGC
CAATGCCAGCATTTTGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFVNYTSELWVTNLTTGTSVSLG
SIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVPHQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQ
APVLVGSEVATIYGIDSLQSDGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN
NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKSMFTIDRFGYSDSGRPLIHID
NSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENRSYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMP
ILVKLIRCNCLSVSATNITLNWLAHHMRFRWGV

Sequences:

>Translated_433_residues
MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFVNYTSELWVTNLTTGTSVSLG
SIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVPHQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQ
APVLVGSEVATIYGIDSLQSDGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN
NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKSMFTIDRFGYSDSGRPLIHID
NSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENRSYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMP
ILVKLIRCNCLSVSATNITLNWLAHHMRFRWGV
>Mature_433_residues
MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFVNYTSELWVTNLTTGTSVSLG
SIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVPHQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQ
APVLVGSEVATIYGIDSLQSDGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN
NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKSMFTIDRFGYSDSGRPLIHID
NSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENRSYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMP
ILVKLIRCNCLSVSATNITLNWLAHHMRFRWGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49238; Mature: 49238

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFV
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECHHHH
NYTSELWVTNLTTGTSVSLGSIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVP
CCCCEEEEEEECCCCEEEECCCCCCEEEEEEECCEEEEECCCEEEEEEECCCCCEEEECC
HQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQAPVLVGSEVATIYGIDSLQS
CCCCCEEEEEECCEEEEEEECCCCCHHHHHHEEEEECCCCCCEEECCCEEEEEECCCCCC
DGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN
CCCEEEEEEEEEEEEECCHHCCEEEEEECCCCCCHHHCCHHHCCCCCCCEEEECCEEEEC
NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKS
CCEEEEEEECCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCC
MFTIDRFGYSDSGRPLIHIDNSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENR
EEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCEEEEECHHHHCCCCCCHHHCHHHHCC
SYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMPILVKLIRCNCLSVSATNITL
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCHHHHHHHHCCEEEEEECEEEH
NWLAHHMRFRWGV
HHHHHHHEEECCC
>Mature Secondary Structure
MKWQWVCRLGLLLSLGFFSNPVAATQSQTLSREIVSEHTITQLKLDGNWLAWRTWRTDFV
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECHHHH
NYTSELWVTNLTTGTSVSLGSIQNETYDFFIDNGRVIWRDKHHVYQYDLATQTNTILQVP
CCCCEEEEEEECCCCEEEECCCCCCEEEEEEECCEEEEECCCEEEEEEECCCCCEEEECC
HQQNHMRWTVAGDWLIWLELEGSPPQLTNQIWKWHLAGNQAPVLVGSEVATIYGIDSLQS
CCCCCEEEEEECCEEEEEEECCCCCHHHHHHEEEEECCCCCCEEECCCEEEEEECCCCCC
DGEIISWAYATHVVVKNSVCSEIHYLALDGSQAPQKLTEPACNIGIKQNLLLNKNFYYCN
CCCEEEEEEEEEEEEECCHHCCEEEEEECCCCCCHHHCCHHHCCCCCCCEEEECCEEEEC
NQHLYARTLANTEILINENNCRFDALYGFSGSGNFLVALNYGEHTTSQISVVGVDIRQKS
CCEEEEEEECCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCC
MFTIDRFGYSDSGRPLIHIDNSLVAWSDNRGAKPVIHVRPIAEVVPTAPRQAADPLLENR
EEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCEEEEECHHHHCCCCCCHHHCHHHHCC
SYYPESQHSLGGLFEQYWQKNGAWQCLAIRKAKNLAKSMPILVKLIRCNCLSVSATNITL
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCHHHHHHHHCCEEEEEECEEEH
NWLAHHMRFRWGV
HHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA